Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 6.4e-136 487.6 289 100.0
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 6.6e-133 477.6 290 99.0
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 1.9e-92 343.2 286 67.5
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 7.4e-92 341.3 285 61.1
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 2.2e-91 339.7 282 63.5
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 2.8e-91 339.3 286 62.6
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 1.1e-90 337.4 283 61.8
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 1.1e-90 337.4 281 73.3
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 9.0e-90 334.3 282 62.8
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 3.4e-89 332.4 282 74.1
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 4.5e-89 332.0 286 61.9
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 2.2e-88 329.7 286 60.5
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 5.0e-88 328.6 282 71.3
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 1.9e-87 326.6 289 58.8
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 1.9e-87 326.6 285 61.4
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 2.5e-87 326.2 287 61.0
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 3.2e-87 325.9 288 60.4
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 1.2e-86 323.9 282 60.3
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 1.2e-86 323.9 282 60.3
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 3.6e-86 322.4 286 60.5
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 7.9e-86 321.2 284 69.4
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 2.3e-85 319.7 287 58.9
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 2.0e-84 316.6 287 61.0
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 3.3e-84 315.8 280 60.7
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 3.3e-84 315.8 291 59.5
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 4.3e-84 315.5 282 59.2
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 9.7e-84 314.3 282 69.9
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 9.7e-84 314.3 282 69.9
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 2.2e-83 313.2 286 57.3
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 8.2e-83 311.2 283 56.5
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 2.4e-82 309.7 281 59.8
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 2.4e-82 309.7 287 59.6
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 4.1e-82 308.9 282 71.6
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 6.9e-82 308.1 286 56.6
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 2.0e-81 306.6 282 57.8
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 5.9e-81 305.1 280 59.6
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 7.7e-81 304.7 284 56.3
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 1.7e-80 303.5 282 57.4
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 1.1e-79 300.8 280 56.8
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 4.2e-79 298.9 282 56.0
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 4.2e-79 298.9 283 56.5
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 1.6e-78 297.0 282 56.4
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 2.1e-78 296.6 281 56.9
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 2.1e-78 296.6 281 56.9
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 2.7e-78 296.2 281 58.4
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 7.9e-78 294.7 281 56.6
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 1.0e-77 294.3 283 60.8
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 1.0e-77 294.3 282 63.1
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 5.1e-77 292.0 288 55.6
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 6.7e-77 291.6 282 62.8
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 8.8e-77 291.2 281 64.4
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 9.7e-76 287.7 285 53.3
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 1.1e-74 284.3 286 64.0
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 1.2e-73 280.8 282 70.9
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.0e-72 277.7 281 65.1
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 8.5e-72 274.6 286 52.4
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 1.9e-71 273.5 284 54.2
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 1.9e-71 273.5 280 53.9
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 1.9e-71 273.5 299 52.8
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 4.2e-71 272.3 286 54.2
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 1.6e-70 270.4 281 51.6
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 8.0e-70 268.1 284 51.1
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 3.0e-69 266.2 261 58.6
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 6.7e-69 265.0 287 50.9
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 3.3e-68 262.7 285 56.8
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 2.2e-67 260.0 300 47.7
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 2.8e-67 259.6 281 50.9
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 2.8e-67 259.6 283 54.4
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 7.0e-66 255.0 281 50.5
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 4.5e-65 252.3 289 63.7
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 4.2e-63 245.7 267 50.9
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 7.2e-63 245.0 233 57.5
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.6e-62 243.8 281 60.9
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 6.1e-62 241.9 281 49.1
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 8.0e-62 241.5 281 54.8
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 5.2e-61 238.8 258 52.3
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 1.4e-58 230.7 253 51.4
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 3.1e-58 229.6 249 52.6
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 4.1e-58 229.2 234 56.4
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 4.5e-57 225.7 283 44.9
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 1.5e-55 220.7 295 49.8
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 2.1e-54 216.9 276 47.8
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 2.3e-53 213.4 236 50.4
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 1.2e-52 211.1 239 49.8
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 2.6e-52 209.9 241 49.0
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 1.3e-43 181.0 235 46.0
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 2.2e-43 180.3 285 50.2
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 2.4e-42 176.8 296 43.9
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 7.8e-41 171.8 116 73.3
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 1.3e-40 171.0 122 67.2
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 1.5e-39 167.5 122 66.4
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 4.7e-38 162.5 210 45.7
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 2.3e-37 160.2 271 38.7
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 2.3e-37 160.2 232 54.3
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 3.1e-37 159.8 204 48.5
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 6.8e-37 158.7 122 61.5
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 1.5e-36 157.5 177 51.4
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 1.5e-36 157.5 181 50.8
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 1.5e-36 157.5 289 35.6
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 2.0e-36 157.1 221 45.2
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 2.6e-36 156.8 204 47.1
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 4.4e-36 156.0 120 65.8
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 5.8e-36 155.6 168 53.0
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 5.8e-36 155.6 168 52.4
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 5.8e-36 155.6 206 47.1
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 9.8e-36 154.8 215 59.5
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 2.2e-35 153.7 204 46.6
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 3.0e-32 143.3 100 72.0
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 3.0e-32 143.3 66 95.5
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 2.5e-31 140.2 213 42.3
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 5.6e-31 139.0 95 71.6
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 9.5e-31 138.3 226 38.9
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 6.8e-29 132.1 140 50.7
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 3.0e-24 116.7 207 48.3
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 1.0e-16 91.7 102 48.0
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 1.7e-16 90.9 86 55.8
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 1.7e-16 90.9 218 33.5
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 2.5e-15 87.0 74 62.2
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 1.8e-13 80.9 54 72.2
Lsat_1_v5_gn_5_30201 Lactuca sativa HOM05D006517 ORTHO05D007886 1.3e-08 64.7 78 44.9
Mapoly0031s0140 Marchantia polymorpha HOM05D000903 ORTHO05D000731 2.8e-06 57.0 100 35.0


User provided reference genes

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