Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G0690 Cannabis sativa HOM05D005722 ORTHO05D007934 0.0e+00 1127.9 577 100.0
Prupe.7G123300 Prunus persica HOM05D005722 ORTHO05D007934 1.7e-241 839.3 572 74.5
Duzib128G0866 Durio zibethinus HOM05D005722 ORTHO05D007934 1.0e-238 830.1 571 75.0
Potri.006G119500 Populus trichocarpa HOM05D005722 ORTHO05D007934 1.4e-238 829.7 569 75.7
Gohir.A09G143300 Gossypium hirsutum HOM05D005722 ORTHO05D007934 3.0e-238 828.6 570 74.7
Hma1.2p1_0547F.1_g176330 Hydrangea macrophylla HOM05D005722 ORTHO05D007934 1.4e-235 819.7 564 73.6
MSTRG.19206 Avicennia marina HOM05D005722 ORTHO05D007934 3.2e-235 818.5 561 74.0
Sabra06G0094100 Salix brachista HOM05D005722 ORTHO05D007934 3.5e-234 815.1 511 80.6
Cfa016476 Carpinus fangiana HOM05D005722 ORTHO05D007934 1.0e-233 813.5 563 75.1
Atru.chr8.1708 Acer truncatum HOM05D005722 ORTHO05D007934 1.3e-233 813.1 557 75.0
QL07p041452 Quercus lobata HOM05D005722 ORTHO05D007934 1.3e-233 813.1 571 72.9
Manes.09G048478 Manihot esculenta HOM05D005722 ORTHO05D007934 3.3e-232 808.5 569 73.1
CSS0018899 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 2.1e-231 805.8 566 73.9
Gorai.006G160000 Gossypium raimondii HOM05D005722 ORTHO05D007934 2.1e-231 805.8 572 72.9
Migut.J00472 Erythranthe guttata HOM05D005722 ORTHO05D007934 2.8e-231 805.4 485 81.0
FAN05G4610 Fragaria x ananassa HOM05D005722 ORTHO05D007934 2.8e-231 805.4 564 73.9
RcHm_v2.0_Chr3g0471261 Rosa chinensis HOM05D005722 ORTHO05D007934 4.7e-231 804.7 567 73.2
CiPaw.09G004900 Carya illinoinensis HOM05D005722 ORTHO05D007934 6.2e-231 804.3 503 80.3
FAN05G1451 Fragaria x ananassa HOM05D005722 ORTHO05D007934 8.0e-231 803.9 564 73.8
Thecc.05G075200 Theobroma cacao HOM05D005722 ORTHO05D007934 1.4e-230 803.1 553 74.1
TAR623G1222 Trochodendron aralioides HOM05D005722 ORTHO05D007934 4.0e-230 801.6 568 72.9
FvH4_6g17170 Fragaria vesca HOM05D005722 ORTHO05D007934 1.5e-229 799.7 498 79.9
Cpa.g.sc5.129 Carica papaya HOM05D005722 ORTHO05D007934 5.8e-229 797.7 500 79.4
Peaxi162Scf00138g00041 Petunia axillaris HOM05D005722 ORTHO05D007934 1.3e-228 796.6 509 78.8
CSS0022139 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 4.9e-228 794.7 482 81.5
MD12G1103200 Malus domestica HOM05D005722 ORTHO05D007934 4.9e-228 794.7 563 72.8
Rhsim03G0086400 Rhododendron simsii HOM05D005722 ORTHO05D007934 8.3e-228 793.9 560 73.9
Nn2g13890 Nelumbo nucifera HOM05D005722 ORTHO05D007934 1.1e-227 793.5 550 73.6
Aqoxy1G01041 Aquilegia oxysepala HOM05D005722 ORTHO05D007934 3.2e-227 792.0 572 71.7
TWI74G0410 Tripterygium wilfordii HOM05D005722 ORTHO05D007934 5.4e-227 791.2 506 77.5
Cc06_g04740 Coffea canephora HOM05D005722 ORTHO05D007934 2.7e-226 788.9 580 70.7
vmacro23004 Vaccinium macrocarpon HOM05D005722 ORTHO05D007934 4.6e-226 788.1 490 80.8
Glyma.13G147700 Glycine max HOM05D005722 ORTHO05D007934 6.0e-226 787.7 565 71.3
Lalb_Chr02g0155431 Lupinus albus HOM05D005722 ORTHO05D007934 3.9e-225 785.0 565 72.0
DCAR_015016 Daucus carota HOM05D005722 ORTHO05D007934 6.6e-225 784.3 490 79.2
COL.COLO4_22250 Corchorus olitorius HOM05D005722 ORTHO05D007934 8.6e-225 783.9 486 79.6
Phvul.007G226300 Phaseolus vulgaris HOM05D005722 ORTHO05D007934 8.6e-225 783.9 551 72.4
PGR004G2571 Punica granatum HOM05D005722 ORTHO05D007934 8.6e-225 783.9 571 70.8
Lj1g0006800 Lotus japonicus HOM05D005722 ORTHO05D007934 1.9e-224 782.7 561 72.2
Nitab4.5_0004731g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 1.9e-224 782.7 491 79.4
Glyma.10G063100 Glycine max HOM05D005722 ORTHO05D007934 9.5e-224 780.4 567 71.8
AUR62026979 Chenopodium quinoa HOM05D005722 ORTHO05D007934 1.6e-223 779.6 510 76.7
Ciclev10011424m.g Citrus clementina HOM05D005722 ORTHO05D007934 2.8e-223 778.9 506 77.7
AUR62042706 Chenopodium quinoa HOM05D005722 ORTHO05D007934 3.6e-223 778.5 482 79.9
EL10Ac7g16706 Beta vulgaris HOM05D005722 ORTHO05D007934 6.2e-223 777.7 493 78.7
VMungo0720G2103 Vigna mungo HOM05D005722 ORTHO05D007934 1.8e-222 776.2 503 75.9
Gorai.006G160100 Gossypium raimondii HOM05D005722 ORTHO05D007934 1.2e-221 773.5 550 71.6
Lj5g0013810 Lotus japonicus HOM05D005722 ORTHO05D007934 2.0e-221 772.7 550 71.5
Gohir.D09G139600 Gossypium hirsutum HOM05D005722 ORTHO05D007934 4.4e-221 771.5 550 71.5
Ah.08g211270 Amaranthus hybridus HOM05D005722 ORTHO05D007934 5.8e-221 771.2 565 69.0
PGSC0003DMG400003879 Solanum tuberosum HOM05D005722 ORTHO05D007934 7.5e-221 770.8 506 76.3
PSO063G5110 Papaver somniferum HOM05D005722 ORTHO05D007934 1.9e-219 766.1 567 69.5
arahy.Tifrunner.gnm1.ann1.D7QF3J Arachis hypogaea HOM05D005722 ORTHO05D007934 7.1e-219 764.2 507 75.0
arahy.Tifrunner.gnm1.ann1.P0W3IN Arachis hypogaea HOM05D005722 ORTHO05D007934 7.1e-219 764.2 507 75.0
Ca_04564_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 7.1e-219 764.2 506 75.3
Lalb_Chr25g0288811 Lupinus albus HOM05D005722 ORTHO05D007934 7.1e-219 764.2 560 71.1
PSO339G6299 Papaver somniferum HOM05D005722 ORTHO05D007934 9.2e-219 763.8 568 69.9
Sopen09g003380 Solanum pennellii HOM05D005722 ORTHO05D007934 9.2e-219 763.8 506 75.1
CAN.G1038.3 Capsicum annuum HOM05D005722 ORTHO05D007934 1.2e-218 763.5 560 69.3
Lsat_1_v5_gn_2_20401 Lactuca sativa HOM05D005722 ORTHO05D007934 1.2e-218 763.5 567 70.2
SalBow3G1081 Salvia bowleyana HOM05D005722 ORTHO05D007934 2.1e-218 762.7 489 76.1
SalBow3G1392 Salvia bowleyana HOM05D005722 ORTHO05D007934 3.5e-218 761.9 489 76.3
TPR.G31667 Trifolium pratense HOM05D005722 ORTHO05D007934 4.6e-218 761.5 554 70.2
Psat6g077240 Pisum sativum HOM05D005722 ORTHO05D007934 6.0e-218 761.1 547 70.4
MBI18_g39612_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 7.8e-218 760.8 544 72.1
ECA238G3369 Erigeron canadensis HOM05D005722 ORTHO05D007934 1.3e-217 760.0 555 70.3
Gohir.A09G143500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.3e-217 760.0 550 70.7
Psat3g038760 Pisum sativum HOM05D005722 ORTHO05D007934 1.3e-217 760.0 555 70.8
Medtr1g062130 Medicago truncatula HOM05D005722 ORTHO05D007934 2.3e-217 759.2 503 74.2
BolC3t12711H Brassica oleracea HOM05D005722 ORTHO05D007934 2.5e-216 755.7 491 75.6
THA.LOC104816667 Tarenaya hassleriana HOM05D005722 ORTHO05D007934 2.5e-216 755.7 481 76.9
Carub.0006s0238 Capsella rubella HOM05D005722 ORTHO05D007934 9.5e-216 753.8 579 66.3
Medtr7g102810 Medicago truncatula HOM05D005722 ORTHO05D007934 1.2e-215 753.4 544 71.1
CARHR209770 Cardamine hirsuta HOM05D005722 ORTHO05D007934 2.8e-215 752.3 500 73.4
TPR.G22453 Trifolium pratense HOM05D005722 ORTHO05D007934 2.8e-215 752.3 487 75.6
Aa31LG1G21640 Aethionema arabicum HOM05D005722 ORTHO05D007934 3.6e-215 751.9 593 65.4
C03p01590 Brassica napus HOM05D005722 ORTHO05D007934 4.7e-215 751.5 482 75.9
BraA03t09503Z Brassica rapa HOM05D005722 ORTHO05D007934 8.1e-215 750.7 482 75.9
Sp6g39190 Schrenkiella parvula HOM05D005722 ORTHO05D007934 1.4e-214 750.0 482 76.1
A03p01230 Brassica napus HOM05D005722 ORTHO05D007934 1.8e-214 749.6 482 75.9
AT5G03555 Arabidopsis thaliana HOM05D005722 ORTHO05D007934 5.2e-214 748.0 480 75.2
Thhalv10015725m.g Eutrema salsugineum HOM05D005722 ORTHO05D007934 6.8e-214 747.7 498 73.7
HanXRQChr14g0432851 Helianthus annuus HOM05D005722 ORTHO05D007934 8.9e-214 747.3 551 70.1
unitig_578.g15784 Utricularia gibba HOM05D005722 ORTHO05D007934 3.4e-213 745.3 509 72.5
SGA_v2.0_scaffold75G24819 Striga asiatica HOM05D005722 ORTHO05D007934 5.8e-213 744.6 559 67.8
Haze_19473 Corylus avellana HOM05D005722 ORTHO05D007934 7.6e-213 744.2 452 82.7
AL6G13040 Arabidopsis lyrata HOM05D005722 ORTHO05D007934 4.9e-212 741.5 507 71.6
Gohir.D09G139500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 8.4e-212 740.7 506 75.1
Sc20g0005780 Simmondsia chinensis HOM05D005722 ORTHO05D007934 2.4e-211 739.2 496 75.2
MELO3C009405.2 Cucumis melo HOM05D005722 ORTHO05D007934 6.0e-210 734.6 570 65.6
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 3.9e-209 731.9 480 75.2
ClCG10G019670 Citrullus lanatus HOM05D005722 ORTHO05D007934 4.7e-207 724.9 508 70.7
CsaV3_3G036500 Cucumis sativus L. HOM05D005722 ORTHO05D007934 1.4e-203 713.4 570 64.4
FAN02G1363 Fragaria x ananassa HOM05D005722 ORTHO05D007934 1.9e-203 713.0 447 79.6
Sed0005717 Sechium edule HOM05D005722 ORTHO05D007934 9.3e-203 710.7 553 66.2
FAN14G5091 Fragaria x ananassa HOM05D005722 ORTHO05D007934 1.0e-201 707.2 432 80.1
ATR0009G019 Amborella trichopoda HOM05D005722 ORTHO05D007934 1.1e-200 703.7 511 69.9
Nitab4.5_0003906g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 9.0e-198 694.1 491 73.3
MBI18_g31623_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 4.3e-192 675.2 484 68.4
MBI18_g19054_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 1.3e-191 673.7 493 66.9
MBI18_g39457_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 1.6e-191 673.3 484 68.2
SEGI_35570 Sequoiadendron giganteum HOM05D005722 ORTHO05D007934 1.2e-189 667.2 474 66.7
Dinv35829 Davidia involucrata HOM05D005722 ORTHO05D007934 1.1e-187 660.6 475 71.2
Ca_30109_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 5.5e-187 658.3 410 78.0
Eucgr.A01597 Eucalyptus grandis HOM05D005722 ORTHO05D007934 5.5e-187 658.3 570 62.1
GSVIVG01033705001 Vitis vinifera HOM05D005722 ORTHO05D007934 9.0e-182 641.0 569 62.4
Cfa016468 Carpinus fangiana HOM05D005722 ORTHO05D007934 5.8e-181 638.3 440 74.5
HPP92_025568 Vanilla planifolia HOM05D005722 ORTHO05D007934 8.4e-180 634.4 464 66.6
Os02g0666700 Oryza sativa ssp. japonica HOM05D005722 ORTHO05D007934 5.5e-179 631.7 523 61.6
Zm00001eb249990 Zea mays HOM05D005722 ORTHO05D007934 3.7e-175 619.0 510 60.6
Cc06_g04750 Coffea canephora HOM05D005722 ORTHO05D007934 3.0e-169 599.4 474 63.5
CDE08G1312 Ceratophyllum demersum HOM05D005722 ORTHO05D007934 7.4e-168 594.7 484 64.5
Mapoly0002s0120 Marchantia polymorpha HOM05D005722 ORTHO05D007934 3.2e-163 579.3 476 57.8
Pp3c14_20990 Physcomitrium patens HOM05D005722 ORTHO05D007934 8.2e-159 564.7 474 58.2
Pp3c1_30640 Physcomitrium patens HOM05D005722 ORTHO05D007934 5.9e-157 558.5 475 57.7
SMO115G0026 Selaginella moellendorffii HOM05D005722 ORTHO05D007934 2.3e-153 546.6 483 56.9
Actinidia26637 Actinidia chinensis HOM05D005722 ORTHO05D007934 7.0e-150 535.0 452 64.8
Cre09.g389356 Chlamydomonas reinhardtii HOM05D005722 ORTHO05D007934 1.6e-146 523.9 474 53.6
Actinidia28931 Actinidia chinensis HOM05D005722 ORTHO05D007934 2.0e-141 506.9 372 70.4
Lj2P123T37 Lonicera japonica HOM05D005722 ORTHO05D007934 3.2e-139 499.6 322 79.2
Sc20g0005800 Simmondsia chinensis HOM05D005722 ORTHO05D007934 5.0e-132 475.7 312 76.6
MCO11G702 Micromonas commoda HOM05D005722 ORTHO05D007934 4.5e-125 452.6 510 47.1
PRCOL_00006021 Prasinoderma coloniale HOM05D005722 ORTHO05D007934 5.0e-124 449.1 493 48.1
Haze_19472 Corylus avellana HOM05D005722 ORTHO05D007934 3.4e-72 276.9 163 79.1
Cfa025019 Carpinus fangiana HOM05D005722 ORTHO05D123305 1.3e-63 248.4 484 32.0
Haze_02843 Corylus avellana HOM05D005722 ORTHO05D029153 5.0e-55 219.9 146 76.7
Sc20g0005790 Simmondsia chinensis HOM05D005722 ORTHO05D029153 1.3e-39 168.7 98 80.6
Pp3s34_270 Physcomitrium patens HOM05D005722 ORTHO05D317165 3.8e-39 167.2 431 26.5
TPR.G39511 Trifolium pratense HOM05D005722 ORTHO05D029153 2.1e-29 134.8 72 86.1
Lsat_1_v5_gn_4_152401 Lactuca sativa HOM05D005722 ORTHO05D007934 2.0e-24 118.2 80 80.0
MCO11G808 Micromonas commoda HOM05D005722 ORTHO05D268580 2.6e-19 101.3 428 24.5
FAN14G5603 Fragaria x ananassa HOM05D005722 ORTHO05D029153 3.5e-16 90.9 65 75.4
MCO10G252 Micromonas commoda HOM05D005722 ORTHO05D270642 5.9e-16 90.1 427 27.9
Cfa016469 Carpinus fangiana HOM05D005722 ORTHO05D125356 6.6e-07 60.1 28 96.4


User provided reference genes

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