Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G0667 Cannabis sativa HOM05D005841 ORTHO05D007132 2.3e-213 745.3 388 100.0
Thecc.10G128400 Theobroma cacao HOM05D005841 ORTHO05D007132 8.3e-139 497.7 388 66.2
Gohir.D06G178900 Gossypium hirsutum HOM05D005841 ORTHO05D007132 9.2e-138 494.2 387 66.4
Atru.chr12.1096 Acer truncatum HOM05D005841 ORTHO05D007132 1.2e-137 493.8 384 66.4
Gohir.A06G171000 Gossypium hirsutum HOM05D005841 ORTHO05D007132 2.0e-137 493.0 387 66.4
Gorai.010G208800 Gossypium raimondii HOM05D005841 ORTHO05D007132 5.9e-137 491.5 387 66.1
CSS0015441 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 5.0e-136 488.4 384 65.4
Dinv24065 Davidia involucrata HOM05D005841 ORTHO05D007132 7.3e-135 484.6 385 66.0
Glyma.04G125600 Glycine max HOM05D005841 ORTHO05D007132 1.2e-134 483.8 388 66.0
COL.COLO4_09288 Corchorus olitorius HOM05D005841 ORTHO05D007132 6.1e-134 481.5 384 64.6
Duzib128G0994 Durio zibethinus HOM05D005841 ORTHO05D007132 6.1e-134 481.5 387 64.6
Phvul.005G012800 Phaseolus vulgaris HOM05D005841 ORTHO05D007132 8.0e-134 481.1 388 64.9
vmacro07900 Vaccinium macrocarpon HOM05D005841 ORTHO05D007132 2.3e-133 479.6 383 63.7
Rhsim03G0005600 Rhododendron simsii HOM05D005841 ORTHO05D007132 3.1e-133 479.2 383 64.5
Potri.003G189400 Populus trichocarpa HOM05D005841 ORTHO05D007132 5.2e-133 478.4 387 64.3
VMungo1080G1721 Vigna mungo HOM05D005841 ORTHO05D007132 3.4e-132 475.7 394 63.5
Glyma.06G313000 Glycine max HOM05D005841 ORTHO05D007132 7.5e-132 474.6 383 64.2
QL04p022932 Quercus lobata HOM05D005841 ORTHO05D007132 1.7e-131 473.4 427 60.2
Medtr3g011510 Medicago truncatula HOM05D005841 ORTHO05D007132 3.7e-131 472.2 386 63.2
Ciclev10001427m.g Citrus clementina HOM05D005841 ORTHO05D007132 1.1e-130 470.7 397 65.5
MSTRG.19910 Avicennia marina HOM05D005841 ORTHO05D007132 4.1e-130 468.8 380 62.6
CiPaw.14G011500 Carya illinoinensis HOM05D005841 ORTHO05D007132 4.1e-130 468.8 442 58.8
Dinv14310 Davidia involucrata HOM05D005841 ORTHO05D007132 4.1e-130 468.8 385 64.2
Lj3g0005753 Lotus japonicus HOM05D005841 ORTHO05D007132 2.0e-129 466.5 379 63.3
Lalb_Chr18g0048171 Lupinus albus HOM05D005841 ORTHO05D007132 3.5e-129 465.7 382 63.1
Manes.04G153300 Manihot esculenta HOM05D005841 ORTHO05D007132 3.5e-129 465.7 402 62.2
Sabra01G0025200 Salix brachista HOM05D005841 ORTHO05D007132 1.3e-128 463.8 388 63.7
TWI38G1535 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 1.3e-128 463.8 378 64.0
Actinidia22040 Actinidia chinensis HOM05D005841 ORTHO05D007132 2.3e-128 463.0 347 67.7
Lju124A25T34 Lonicera japonica HOM05D005841 ORTHO05D007132 3.9e-128 462.2 382 64.7
Potri.001G036400 Populus trichocarpa HOM05D005841 ORTHO05D007132 6.6e-128 461.5 388 63.1
Sabra03G0139600 Salix brachista HOM05D005841 ORTHO05D007132 8.6e-128 461.1 371 65.0
Lsat_1_v5_gn_5_163601 Lactuca sativa HOM05D005841 ORTHO05D007132 1.5e-127 460.3 417 62.1
Oeu007758.1 Olea europaea HOM05D005841 ORTHO05D007132 1.9e-127 459.9 383 61.1
MSTRG.26082 Avicennia marina HOM05D005841 ORTHO05D007132 9.5e-127 457.6 383 63.4
Peaxi162Scf00258g00731 Petunia axillaris HOM05D005841 ORTHO05D007132 1.2e-126 457.2 429 55.9
THA.LOC104809184 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 2.8e-126 456.1 383 61.9
PSO339G0077 Papaver somniferum HOM05D005841 ORTHO05D007132 4.7e-126 455.3 386 61.1
arahy.Tifrunner.gnm1.ann1.AX9XXP Arachis hypogaea HOM05D005841 ORTHO05D007132 6.2e-126 454.9 392 61.5
PSO384G2928 Papaver somniferum HOM05D005841 ORTHO05D007132 8.0e-126 454.5 386 61.1
Sc20g0000960 Simmondsia chinensis HOM05D005841 ORTHO05D007132 1.4e-125 453.8 384 61.7
CsaV3_5G029280 Cucumis sativus L. HOM05D005841 ORTHO05D007132 3.1e-125 452.6 405 61.7
THA.LOC104824200 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 4.0e-125 452.2 383 63.2
DCAR_019783 Daucus carota HOM05D005841 ORTHO05D007132 6.8e-125 451.4 381 61.4
MELO3C011778.2 Cucumis melo HOM05D005841 ORTHO05D007132 8.9e-125 451.1 405 61.5
Sed0002293 Sechium edule HOM05D005841 ORTHO05D007132 8.9e-125 451.1 405 60.0
Haze_02951 Corylus avellana HOM05D005841 ORTHO05D007132 2.0e-124 449.9 466 54.7
Ca_26913_v3 Cicer arietinum L. HOM05D005841 ORTHO05D007132 4.4e-124 448.7 364 62.1
Nitab4.5_0000324g0020 Nicotiana tabacum HOM05D005841 ORTHO05D007132 4.4e-124 448.7 428 55.6
TPR.G5121 Trifolium pratense HOM05D005841 ORTHO05D007132 4.4e-124 448.7 418 58.1
Sed0011967 Sechium edule HOM05D005841 ORTHO05D007132 7.5e-124 448.0 418 59.1
TWI15G0221 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 7.5e-124 448.0 382 61.5
Eucgr.G03178 Eucalyptus grandis HOM05D005841 ORTHO05D007132 9.8e-124 447.6 426 57.7
Cc06_g15810 Coffea canephora HOM05D005841 ORTHO05D007132 2.2e-123 446.4 391 59.3
Nitab4.5_0004458g0010 Nicotiana tabacum HOM05D005841 ORTHO05D007132 2.2e-123 446.4 427 54.8
ECA248G0891 Erigeron canadensis HOM05D005841 ORTHO05D007132 4.9e-123 445.3 325 68.3
unitig_699.g19444 Utricularia gibba HOM05D005841 ORTHO05D007132 1.9e-122 443.4 377 60.2
A09p47340 Brassica napus HOM05D005841 ORTHO05D007132 2.1e-121 439.9 419 58.7
C08p29570 Brassica napus HOM05D005841 ORTHO05D007132 2.7e-121 439.5 414 60.1
EL10Ac9g20941 Beta vulgaris HOM05D005841 ORTHO05D007132 3.5e-121 439.1 364 62.6
BolC8t50563H Brassica oleracea HOM05D005841 ORTHO05D007132 1.0e-120 437.6 416 60.1
BraA09t40195Z Brassica rapa HOM05D005841 ORTHO05D007132 1.7e-120 436.8 419 59.2
Aa31sc488G20 Aethionema arabicum HOM05D005841 ORTHO05D007132 2.3e-120 436.4 384 59.4
HanXRQChr13g0390471 Helianthus annuus HOM05D005841 ORTHO05D007132 3.0e-120 436.0 325 66.8
Hund07799 Selenicereus undatus HOM05D005841 ORTHO05D007132 3.0e-120 436.0 380 61.3
Thhalv10010421m.g Eutrema salsugineum HOM05D005841 ORTHO05D007132 1.1e-119 434.1 408 57.8
A07p22080 Brassica napus HOM05D005841 ORTHO05D007132 1.9e-119 433.3 408 58.3
BraA07t29891Z Brassica rapa HOM05D005841 ORTHO05D007132 1.9e-119 433.3 408 58.3
CARHR164270 Cardamine hirsuta HOM05D005841 ORTHO05D007132 5.6e-119 431.8 406 58.9
GSVIVG01027370001 Vitis vinifera HOM05D005841 ORTHO05D007132 9.5e-119 431.0 382 60.7
BcaB02g07739 Brassica carinata HOM05D005841 ORTHO05D007132 1.2e-118 430.6 335 63.6
AL5G35420 Arabidopsis lyrata HOM05D005841 ORTHO05D007132 2.8e-118 429.5 419 57.8
AT3G54360 Arabidopsis thaliana HOM05D005841 ORTHO05D007132 3.6e-118 429.1 413 59.1
BcaB01g00199 Brassica carinata HOM05D005841 ORTHO05D007132 3.6e-118 429.1 389 58.6
Carub.0005s2096 Capsella rubella HOM05D005841 ORTHO05D007132 4.7e-118 428.7 419 57.3
PGSC0003DMG400023670 Solanum tuberosum HOM05D005841 ORTHO05D007132 4.7e-118 428.7 447 52.3
AUR62041651 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.8e-117 426.8 365 60.5
Ah.07g203740 Amaranthus hybridus HOM05D005841 ORTHO05D007132 4.0e-117 425.6 364 61.5
Aqoxy3G04362 Aquilegia oxysepala HOM05D005841 ORTHO05D007132 4.0e-117 425.6 379 58.6
Sp5g08040 Schrenkiella parvula HOM05D005841 ORTHO05D007132 4.0e-117 425.6 422 57.1
RcHm_v2.0_Chr1g0330051 Rosa chinensis HOM05D005841 ORTHO05D007132 6.8e-117 424.9 378 60.8
MD07G1085200 Malus domestica HOM05D005841 ORTHO05D007132 1.2e-116 424.1 382 60.7
MBI19_g24060_MAGBIO Magnolia biondii HOM05D005841 ORTHO05D007132 3.4e-116 422.5 317 67.8
Sopen10g031070 Solanum pennellii HOM05D005841 ORTHO05D007132 1.7e-115 420.2 469 49.7
AUR62035532 Chenopodium quinoa HOM05D005841 ORTHO05D007132 3.7e-115 419.1 365 60.5
Solyc10g080520.3 Solanum lycopersicum HOM05D005841 ORTHO05D007132 4.9e-115 418.7 308 66.6
CDE02G3427 Ceratophyllum demersum HOM05D005841 ORTHO05D007132 3.2e-114 416.0 333 61.6
Prupe.2G051700 Prunus persica HOM05D005841 ORTHO05D007132 4.1e-114 415.6 379 60.4
arahy.Tifrunner.gnm1.ann1.87YK44 Arachis hypogaea HOM05D005841 ORTHO05D007132 9.2e-114 414.5 397 57.9
Psat5g225080 Pisum sativum HOM05D005841 ORTHO05D007132 1.7e-112 410.2 329 65.0
FvH4_7g04620 Fragaria vesca HOM05D005841 ORTHO05D007132 2.5e-111 406.4 379 59.1
ClCG11G012870 Citrullus lanatus HOM05D005841 ORTHO05D007132 3.3e-111 406.0 404 58.7
Zm00001eb126920 Zea mays HOM05D005841 ORTHO05D007132 3.3e-111 406.0 339 61.1
Os01g0104100 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 3.4e-108 396.0 368 55.4
Nn2g15922 Nelumbo nucifera HOM05D005841 ORTHO05D007132 7.6e-108 394.8 376 56.9
SGA_v2.0_scaffold69G23059 Striga asiatica HOM05D005841 ORTHO05D007132 8.4e-107 391.3 376 55.9
SEGI_15550 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 1.4e-106 390.6 382 54.2
FAN06G4202 Fragaria x ananassa HOM05D005841 ORTHO05D007132 4.2e-106 389.0 365 58.4
FAN03G2595 Fragaria x ananassa HOM05D005841 ORTHO05D007132 5.4e-106 388.7 365 58.4
FAN10G3225 Fragaria x ananassa HOM05D005841 ORTHO05D007132 7.1e-106 388.3 365 58.4
FAN06G1077 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.1e-105 386.7 365 57.8
FAN01G0675 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.3e-104 384.0 365 57.8
BcaC08g44679 Brassica carinata HOM05D005841 ORTHO05D007132 1.3e-102 377.5 386 55.4
Migut.J01841 Erythranthe guttata HOM05D005841 ORTHO05D007132 2.4e-101 373.2 383 53.0
C06p22120 Brassica napus HOM05D005841 ORTHO05D007132 2.2e-99 366.7 305 62.0
BolC6t37399H Brassica oleracea HOM05D005841 ORTHO05D007132 2.2e-99 366.7 305 62.0
Mapoly0042s0033 Marchantia polymorpha HOM05D005841 ORTHO05D007132 4.2e-98 362.5 323 57.0
Os02g0795300 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 9.6e-95 351.3 378 50.8
Pp3c4_17260 Physcomitrium patens HOM05D005841 ORTHO05D007132 1.4e-93 347.4 320 54.7
AagrBONN_evm.TU.Sc2ySwM_344.2135 Anthoceros agrestis HOM05D005841 ORTHO05D007132 1.6e-89 334.0 347 51.3
Gorai.011G224300 Gossypium raimondii HOM05D005841 ORTHO05D007132 1.8e-88 330.5 276 62.3
SMO194G0025 Selaginella moellendorffii HOM05D005841 ORTHO05D007132 1.2e-81 307.8 318 50.0
CSS0023245 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 9.3e-74 281.6 235 63.4
AUR62039567 Chenopodium quinoa HOM05D005841 ORTHO05D007132 2.7e-73 280.0 390 44.9
Ah.15g098060 Amaranthus hybridus HOM05D005841 ORTHO05D007132 4.8e-70 269.2 256 56.6
AUR62041645 Chenopodium quinoa HOM05D005841 ORTHO05D007132 7.9e-65 251.9 236 57.6
ATR0068G039 Amborella trichopoda HOM05D005841 ORTHO05D007132 2.3e-64 250.4 233 54.5
Cpa.g.sc33.143 Carica papaya HOM05D005841 ORTHO05D007132 3.9e-56 223.0 157 72.0
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 8.2e-54 215.3 263 47.9
CBR_g19049 Chara braunii HOM05D005841 ORTHO05D007132 1.5e-52 211.1 388 35.8
FAN03G2434 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.1e-49 200.7 129 76.0
Hma1.2p1_3953F.1_g338070 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 6.1e-49 199.1 148 67.6
Gohir.D10G200101 Gossypium hirsutum HOM05D005841 ORTHO05D007132 3.3e-47 193.4 156 64.1
TAR629G2175 Trochodendron aralioides HOM05D005841 ORTHO05D007132 1.7e-43 181.0 125 70.4
Gohir.D10G200050 Gossypium hirsutum HOM05D005841 ORTHO05D007132 2.1e-41 174.1 115 73.0
SEGI_12352 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 1.6e-36 157.9 126 59.5
Hma1.2p1_3953F.1_g338060 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 1.8e-21 107.8 87 64.4
Lsat_1_v5_gn_1_17940 Lactuca sativa HOM05D005841 ORTHO05D007132 2.4e-21 107.5 73 68.5
SEGI_26376 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 2.5e-18 97.4 146 41.1
ATR0068G030 Amborella trichopoda HOM05D005841 ORTHO05D007132 1.4e-13 81.6 66 65.2
Cre03.g172600 Chlamydomonas reinhardtii HOM05D005841 ORTHO05D007132 3.3e-10 70.5 423 20.8
Psat0s5799g0040 Pisum sativum HOM05D005841 ORTHO05D007132 8.1e-09 65.9 79 50.6
TPR.G5122 Trifolium pratense HOM05D003377 ORTHO05D004080 3.4e-07 60.5 49 63.3
Psat7g004640 Pisum sativum HOM05D000860 ORTHO05D005731 2.9e-06 57.4 56 51.8


User provided reference genes

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