Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 8.6e-114 413.7 211 100.0
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 3.5e-67 258.8 209 64.1
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 1.3e-66 256.9 211 66.8
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 1.1e-65 253.8 213 64.3
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 4.3e-65 251.9 206 67.0
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 7.3e-65 251.1 209 64.6
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 9.6e-65 250.8 178 73.0
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 1.3e-64 250.4 190 69.5
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 2.1e-64 249.6 213 63.8
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 2.8e-64 249.2 211 64.9
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 1.5e-62 243.4 209 63.2
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 2.6e-62 242.7 210 61.9
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 4.5e-62 241.9 183 67.8
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 9.9e-62 240.7 185 68.6
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 9.9e-62 240.7 209 62.7
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 9.9e-62 240.7 209 62.7
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 9.9e-62 240.7 210 60.5
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 9.9e-62 240.7 210 61.0
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 1.7e-61 240.0 188 66.0
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 2.2e-61 239.6 188 65.4
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.2e-61 239.6 209 62.2
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 2.2e-61 239.6 192 66.1
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.9e-61 239.2 209 61.7
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 4.9e-61 238.4 206 62.1
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 6.4e-61 238.0 190 62.6
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 8.4e-61 237.7 213 60.6
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 8.4e-61 237.7 215 59.5
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 8.4e-61 237.7 165 70.9
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.9e-60 236.5 209 61.7
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 2.4e-60 236.1 184 62.0
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 3.2e-60 235.7 166 70.5
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 4.2e-60 235.3 168 69.6
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 5.4e-60 235.0 177 68.4
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 7.1e-60 234.6 162 71.6
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 7.1e-60 234.6 165 70.3
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 2.1e-59 233.0 154 75.3
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 2.7e-59 232.6 209 62.2
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 4.6e-59 231.9 176 63.1
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 4.6e-59 231.9 164 68.3
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 6.0e-59 231.5 168 68.5
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 7.9e-59 231.1 217 58.1
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 7.9e-59 231.1 187 64.7
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 1.0e-58 230.7 183 64.5
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 1.3e-58 230.3 178 66.9
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 1.3e-58 230.3 143 76.2
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 1.8e-58 229.9 177 67.2
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 2.3e-58 229.6 215 58.1
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 3.0e-58 229.2 177 61.6
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 3.0e-58 229.2 182 64.8
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 3.9e-58 228.8 183 64.5
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 5.1e-58 228.4 194 62.4
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 5.1e-58 228.4 213 58.2
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 6.7e-58 228.0 178 62.4
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 8.7e-58 227.6 177 61.0
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 8.7e-58 227.6 157 71.3
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 1.5e-57 226.9 174 64.4
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 1.5e-57 226.9 159 71.7
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 1.5e-57 226.9 159 71.7
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 3.3e-57 225.7 183 63.9
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 4.3e-57 225.3 198 61.1
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 7.4e-57 224.6 178 61.8
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 9.6e-57 224.2 183 62.8
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 9.6e-57 224.2 160 68.1
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 2.1e-56 223.0 177 62.1
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 3.7e-56 222.2 178 60.7
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 3.7e-56 222.2 152 72.4
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 6.2e-56 221.5 178 61.2
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 8.1e-56 221.1 222 56.8
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 6.9e-55 218.0 202 57.9
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 9.0e-55 217.6 208 58.2
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 1.2e-54 217.2 173 61.3
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 1.5e-54 216.9 190 57.9
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 1.5e-54 216.9 160 63.1
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 3.4e-54 215.7 194 56.2
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 7.6e-54 214.5 214 57.5
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 2.2e-53 213.0 214 56.1
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 1.1e-52 210.7 148 68.2
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 2.5e-52 209.5 159 69.8
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 9.3e-52 207.6 155 65.2
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 4.6e-51 205.3 197 57.4
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 1.3e-50 203.8 150 71.3
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 5.1e-50 201.8 211 56.9
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 1.5e-49 200.3 235 51.1
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 3.3e-49 199.1 126 73.8
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 4.3e-49 198.7 145 68.3
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 7.4e-49 198.0 175 63.4
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 2.8e-48 196.1 182 54.4
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 3.2e-44 182.6 143 62.9
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 5.1e-42 175.3 141 63.1
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 4.5e-38 162.2 150 48.7
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 4.5e-38 162.2 150 48.7
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 5.9e-38 161.8 118 67.8
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 1.0e-37 161.0 157 57.3
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 5.5e-36 155.2 156 46.8
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 2.0e-33 146.7 87 78.2
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 4.8e-32 142.1 149 55.7
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 1.8e-31 140.2 150 46.0
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 4.2e-28 129.0 158 41.1
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 2.7e-27 126.3 113 57.5
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 5.9e-22 108.6 179 36.3
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 1.1e-20 104.4 97 54.6
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.8e-18 97.1 119 51.3
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 4.4e-17 92.4 213 38.5
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 1.7e-16 90.5 143 30.1
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 4.5e-14 82.4 152 32.9
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 6.5e-13 78.6 211 32.2
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 4.2e-12 75.9 125 28.0
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 4.0e-10 69.3 49 57.1
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 2.0e-09 67.0 44 70.5
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 4.4e-09 65.9 49 63.3
Oeu034116.1 Olea europaea HOM05D007188 ORTHO05D009102 4.4e-09 65.9 48 64.6
vmacro04837 Vaccinium macrocarpon HOM05D000026 ORTHO05D000094 1.7e-08 63.9 60 55.0
VMungo1080G0524 Vigna mungo HOM05D007188 ORTHO05D008722 1.2e-06 57.8 35 74.3
CDE02G0641 Ceratophyllum demersum HOM05D000146 ORTHO05D002110 4.5e-06 55.8 86 39.5


User provided reference genes

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