Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G0504 Cannabis sativa HOM05D005685 ORTHO05D007046 0.0e+00 1436.8 713 100.0
Haze_08449 Corylus avellana HOM05D005685 ORTHO05D007046 6.6e-251 870.9 711 64.0
MD11G1273300 Malus domestica HOM05D005685 ORTHO05D007046 8.6e-251 870.5 717 63.2
Dinv13349 Davidia involucrata HOM05D005685 ORTHO05D007046 1.1e-250 870.2 717 63.2
Prupe.4G154100 Prunus persica HOM05D005685 ORTHO05D007046 1.9e-250 869.4 706 63.0
CiPaw.11G154400 Carya illinoinensis HOM05D005685 ORTHO05D007046 2.6e-247 859.0 707 62.9
Phvul.011G173500 Phaseolus vulgaris HOM05D005685 ORTHO05D007046 1.9e-237 826.2 717 59.6
CSS0007667 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 2.4e-237 825.9 722 60.4
Lalb_Chr19g0133681 Lupinus albus HOM05D005685 ORTHO05D007046 2.4e-237 825.9 720 59.9
CsaV3_4G032730 Cucumis sativus L. HOM05D005685 ORTHO05D007046 7.1e-237 824.3 717 59.8
Actinidia12613 Actinidia chinensis HOM05D005685 ORTHO05D007046 9.3e-237 823.9 708 60.3
Hma1.2p1_0713F.1_g207810 Hydrangea macrophylla HOM05D005685 ORTHO05D007046 2.7e-236 822.4 722 59.6
ClCG11G017070 Citrullus lanatus HOM05D005685 ORTHO05D007046 1.5e-234 816.6 710 59.4
VMungo1127G1789 Vigna mungo HOM05D005685 ORTHO05D007046 1.5e-234 816.6 718 58.9
FvH4_3g17370 Fragaria vesca HOM05D005685 ORTHO05D007046 1.6e-233 813.1 707 61.2
Sed0016294 Sechium edule HOM05D005685 ORTHO05D007046 1.8e-232 809.7 718 59.1
Lj1g0015970 Lotus japonicus HOM05D005685 ORTHO05D007046 1.4e-229 800.0 720 58.3
Ciclev10019120m.g Citrus clementina HOM05D005685 ORTHO05D007046 7.9e-228 794.3 717 57.9
Gorai.007G332400 Gossypium raimondii HOM05D005685 ORTHO05D007046 1.8e-227 793.1 709 58.8
Gohir.A11G290000 Gossypium hirsutum HOM05D005685 ORTHO05D007046 1.1e-226 790.4 709 58.4
Gohir.D11G302400 Gossypium hirsutum HOM05D005685 ORTHO05D007046 2.5e-226 789.3 709 58.4
FAN25G1369 Fragaria x ananassa HOM05D005685 ORTHO05D007046 4.3e-226 788.5 701 60.2
Cpa.g.sc77.65 Carica papaya HOM05D005685 ORTHO05D007046 1.8e-224 783.1 679 59.2
GSVIVG01014072001 Vitis vinifera HOM05D005685 ORTHO05D007046 1.2e-223 780.4 704 57.7
TAR605G0002 Trochodendron aralioides HOM05D005685 ORTHO05D007046 7.6e-223 777.7 715 56.8
Sabra11G0083400 Salix brachista HOM05D005685 ORTHO05D007046 2.2e-222 776.2 703 58.0
Manes.03G084500 Manihot esculenta HOM05D005685 ORTHO05D007046 4.9e-222 775.0 682 59.5
Psat4g139160 Pisum sativum HOM05D005685 ORTHO05D007046 1.9e-221 773.1 719 56.9
Atru.chr2.1911 Acer truncatum HOM05D005685 ORTHO05D007046 7.1e-221 771.2 709 55.9
Potri.001G380900 Populus trichocarpa HOM05D005685 ORTHO05D007046 7.1e-221 771.2 711 57.4
Potri.011G102100 Populus trichocarpa HOM05D005685 ORTHO05D007046 4.6e-220 768.5 711 58.1
RhsimUnG0165000 Rhododendron simsii HOM05D005685 ORTHO05D007046 3.9e-219 765.4 659 60.8
MELO3C016678.2 Cucumis melo HOM05D005685 ORTHO05D007046 5.3e-216 755.0 753 54.1
Nn1g00647 Nelumbo nucifera HOM05D005685 ORTHO05D007046 2.9e-214 749.2 711 54.4
Medtr8g461480 Medicago truncatula HOM05D005685 ORTHO05D007046 5.0e-214 748.4 715 55.9
FAN21G3337 Fragaria x ananassa HOM05D005685 ORTHO05D007046 3.2e-213 745.7 718 56.8
DCAR_017584 Daucus carota HOM05D005685 ORTHO05D007046 7.2e-213 744.6 722 54.6
FAN16G1001 Fragaria x ananassa HOM05D005685 ORTHO05D007046 2.7e-212 742.7 701 57.5
Sabra16G0251100 Salix brachista HOM05D005685 ORTHO05D007046 1.0e-211 740.7 731 55.1
MSTRG.14992 Avicennia marina HOM05D005685 ORTHO05D007046 4.3e-210 735.3 719 54.4
Thecc.07G137700 Theobroma cacao HOM05D005685 ORTHO05D007046 3.7e-209 732.3 650 60.3
RhsimUnG0060100 Rhododendron simsii HOM05D005685 ORTHO05D007046 8.2e-209 731.1 663 58.5
PGR031G3876 Punica granatum HOM05D005685 ORTHO05D007046 2.9e-206 722.6 715 54.0
THA.LOC104808083 Tarenaya hassleriana HOM05D005685 ORTHO05D007046 4.2e-205 718.8 717 55.1
RhsimUnG0224400 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.8e-203 713.4 733 53.8
TPR.G16474 Trifolium pratense HOM05D005685 ORTHO05D007046 2.3e-203 713.0 682 56.9
PSO063G4015 Papaver somniferum HOM05D005685 ORTHO05D007046 3.9e-203 712.2 716 52.5
Cc05_g10550 Coffea canephora HOM05D005685 ORTHO05D007046 6.7e-203 711.4 715 53.8
Cfa019501 Carpinus fangiana HOM05D005685 ORTHO05D007046 2.2e-201 706.4 543 67.6
PSO782G3742 Papaver somniferum HOM05D005685 ORTHO05D007046 2.0e-199 699.9 717 51.9
Duzib213G0171 Durio zibethinus HOM05D005685 ORTHO05D007046 3.8e-198 695.7 711 53.6
Sc03g0010780 Simmondsia chinensis HOM05D005685 ORTHO05D007046 6.1e-196 688.3 704 52.7
SalBow8G2073 Salvia bowleyana HOM05D005685 ORTHO05D007046 3.9e-195 685.6 735 51.4
Sopen07g030310 Solanum pennellii HOM05D005685 ORTHO05D007046 6.3e-193 678.3 708 51.0
Solyc07g062050.3 Solanum lycopersicum HOM05D005685 ORTHO05D007046 1.4e-192 677.2 708 51.0
Migut.M00685 Erythranthe guttata HOM05D005685 ORTHO05D007046 7.0e-192 674.9 714 51.5
vmacro11986 Vaccinium macrocarpon HOM05D005685 ORTHO05D007046 2.0e-191 673.3 732 51.5
CAN.G375.61 Capsicum annuum HOM05D005685 ORTHO05D007046 2.6e-191 672.9 705 51.5
COL.COLO4_17454 Corchorus olitorius HOM05D005685 ORTHO05D007046 3.5e-191 672.5 718 52.5
Aqoxy4G01266 Aquilegia oxysepala HOM05D005685 ORTHO05D007046 3.8e-190 669.1 720 50.0
Sp1g15160 Schrenkiella parvula HOM05D005685 ORTHO05D007046 1.9e-189 666.8 720 51.0
Ca_12745_v3 Cicer arietinum L. HOM05D005685 ORTHO05D007046 3.2e-189 666.0 667 54.4
EL10Ac4g08448 Beta vulgaris HOM05D005685 ORTHO05D007046 4.2e-189 665.6 712 50.3
Sp5g33630 Schrenkiella parvula HOM05D005685 ORTHO05D007046 4.2e-189 665.6 719 51.0
Lsat_1_v5_gn_5_126281 Lactuca sativa HOM05D005685 ORTHO05D007046 1.2e-188 664.1 710 49.2
Peaxi162Scf00111g01236 Petunia axillaris HOM05D005685 ORTHO05D007046 4.0e-187 659.1 677 51.3
Thhalv10006979m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 4.4e-186 655.6 727 50.1
Ah.03g134490 Amaranthus hybridus HOM05D005685 ORTHO05D007046 2.2e-185 653.3 717 48.7
HanXRQChr10g0305611 Helianthus annuus HOM05D005685 ORTHO05D007046 6.3e-185 651.7 715 49.8
Carub.0001s1676 Capsella rubella HOM05D005685 ORTHO05D007046 6.5e-182 641.7 717 50.1
AT1G78540 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 8.5e-182 641.3 714 49.7
C05p15360 Brassica napus HOM05D005685 ORTHO05D007046 1.4e-179 634.0 718 48.7
BraA06t24453Z Brassica rapa HOM05D005685 ORTHO05D007046 4.0e-179 632.5 708 49.0
A06p12940 Brassica napus HOM05D005685 ORTHO05D007046 5.2e-179 632.1 708 48.9
AL7G51000 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 8.8e-179 631.3 720 49.3
SGA_v2.0_scaffold73G24373 Striga asiatica HOM05D005685 ORTHO05D007046 4.4e-178 629.0 688 50.4
CARHR017570 Cardamine hirsuta HOM05D005685 ORTHO05D007046 1.7e-177 627.1 719 48.7
Thhalv10018251m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 6.3e-177 625.2 709 49.2
Carub.0002s2539 Capsella rubella HOM05D005685 ORTHO05D007046 1.7e-174 617.1 718 48.5
BolC5t30242H Brassica oleracea HOM05D005685 ORTHO05D007046 1.9e-173 613.6 745 46.6
Lj1C822G13 Lonicera japonica HOM05D005685 ORTHO05D007046 7.2e-173 611.7 676 50.1
AUR62019678 Chenopodium quinoa HOM05D005685 ORTHO05D007046 2.7e-172 609.8 735 46.3
CARHR072030 Cardamine hirsuta HOM05D005685 ORTHO05D007046 6.1e-172 608.6 718 47.9
PGSC0003DMG400007083 Solanum tuberosum HOM05D005685 ORTHO05D007046 1.8e-171 607.1 760 45.5
Aa31LG7G1870 Aethionema arabicum HOM05D005685 ORTHO05D007046 8.8e-171 604.7 725 47.0
AT1G17040 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 8.6e-166 588.2 682 48.1
AL2G38940 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 1.1e-165 587.8 657 50.5
Aa31LG4G2430 Aethionema arabicum HOM05D005685 ORTHO05D007046 1.6e-164 583.9 682 46.9
AUR62013935 Chenopodium quinoa HOM05D005685 ORTHO05D007046 1.0e-163 581.3 666 46.8
ECA234G1223 Erigeron canadensis HOM05D005685 ORTHO05D007046 6.4e-161 572.0 694 46.0
ATR0665G442 Amborella trichopoda HOM05D005685 ORTHO05D007046 2.7e-159 566.6 721 45.8
unitig_747.g21593 Utricularia gibba HOM05D005685 ORTHO05D007046 6.8e-155 552.0 714 45.5
Nitab4.5_0001140g0120 Nicotiana tabacum HOM05D005685 ORTHO05D007046 4.4e-154 549.3 757 42.3
AL1G29220 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 4.7e-148 529.3 611 49.8
BcaC05g25679 Brassica carinata HOM05D005685 ORTHO05D007046 2.6e-146 523.5 577 50.4
Glyma.15G211900 Glycine max HOM05D005685 ORTHO05D007046 8.3e-145 518.5 511 56.9
BcaB02g06680 Brassica carinata HOM05D005685 ORTHO05D007046 5.6e-141 505.8 540 52.8
arahy.Tifrunner.gnm1.ann1.TIF1LK Arachis hypogaea HOM05D005685 ORTHO05D007046 2.1e-140 503.8 512 55.5
arahy.Tifrunner.gnm1.ann1.4M0U4E Arachis hypogaea HOM05D005685 ORTHO05D007046 2.8e-140 503.4 513 55.4
Zm00001eb004590 Zea mays HOM05D005685 ORTHO05D007046 2.0e-138 497.3 717 40.3
FAN11G3672 Fragaria x ananassa HOM05D005685 ORTHO05D007046 2.1e-127 460.7 498 52.8
Pp3c20_21160 Physcomitrium patens HOM05D005685 ORTHO05D007046 9.6e-125 451.8 772 36.4
AagrBONN_evm.TU.Sc2ySwM_228.1006 Anthoceros agrestis HOM05D005685 ORTHO05D007046 8.1e-124 448.7 781 36.9
CSS0011531 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 8.4e-121 438.7 434 55.3
DCAR_013783 Daucus carota HOM05D005685 ORTHO05D007046 7.1e-120 435.6 722 37.8
RhsimUnG0062900 Rhododendron simsii HOM05D005685 ORTHO05D007046 9.3e-120 435.3 485 53.0
SEGI_25985 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 1.2e-119 434.9 643 39.3
Mapoly0011s0171 Marchantia polymorpha HOM05D005685 ORTHO05D007046 1.3e-118 431.4 758 36.5
RcHm_v2.0_Chr5g0028891 Rosa chinensis HOM05D005685 ORTHO05D007046 2.3e-118 430.6 280 75.0
SMO351G0414 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 6.2e-116 422.5 693 36.7
HPP92_014870 Vanilla planifolia HOM05D005685 ORTHO05D007046 3.1e-107 393.7 648 38.4
Eucgr.F03221 Eucalyptus grandis HOM05D005685 ORTHO05D007046 5.3e-107 392.9 375 54.4
Nitab4.5_0003618g0060 Nicotiana tabacum HOM05D005685 ORTHO05D007046 1.6e-103 381.3 812 33.5
TWI38G0887 Tripterygium wilfordii HOM05D005685 ORTHO05D007046 9.7e-101 372.1 264 66.7
BraA06t26874Z Brassica rapa HOM05D005685 ORTHO05D007046 5.7e-93 346.3 271 63.5
Glyma.15G212100 Glycine max HOM05D005685 ORTHO05D007046 4.2e-88 330.1 219 68.9
CDE04G2909 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 2.6e-74 284.3 303 49.5
Eucgr.F03222 Eucalyptus grandis HOM05D005685 ORTHO05D007046 1.2e-71 275.4 338 46.2
Os10g0567300 Oryza sativa ssp. japonica HOM05D005685 ORTHO05D007046 2.6e-69 267.7 302 45.7
CDE04G0489 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 1.6e-58 231.9 320 42.5
CSS0047371 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 9.2e-51 206.1 118 74.6
MBI19_g17443_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 4.0e-30 137.5 103 67.0
Zm00001eb210210 Zea mays HOM05D005685 ORTHO05D007046 3.2e-27 127.9 156 44.2
Mapoly0028s0082 Marchantia polymorpha HOM05D005685 ORTHO05D007046 5.2e-22 110.5 134 45.5
Pp3c7_2410 Physcomitrium patens HOM05D005685 ORTHO05D007046 6.8e-22 110.2 197 39.6
SMO145G0004 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 3.4e-21 107.8 142 45.8
CBR_g19551 Chara braunii HOM05D005685 ORTHO05D007046 4.9e-20 104.0 132 45.5
SEGI_34067 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 4.9e-20 104.0 155 38.7
CSS0003149 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 1.7e-17 95.5 82 64.6
CBR_g28498 Chara braunii HOM05D005685 ORTHO05D007046 6.9e-14 83.6 75 58.7
MBI19_g17438_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 4.3e-08 64.3 55 54.5
SEGI_05558 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 1.6e-07 62.4 114 31.6
A08p10430 Brassica napus HOM05D005685 ORTHO05D007046 6.9e-06 57.0 114 34.2


User provided reference genes

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