Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 1.1e-78 296.6 153 100.0
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 1.4e-20 103.6 128 48.4
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 4.4e-19 98.6 119 48.7
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 7.5e-19 97.8 124 48.4
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 1.1e-17 94.0 101 53.5
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 1.4e-17 93.6 111 50.5
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 2.4e-17 92.8 137 47.4
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 5.4e-17 91.7 117 49.6
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 5.4e-17 91.7 102 50.0
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 5.4e-17 91.7 112 48.2
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 9.2e-17 90.9 89 58.4
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 3.5e-16 89.0 143 42.7
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 4.6e-16 88.6 71 63.4
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 1.7e-15 86.7 125 45.6
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 1.7e-15 86.7 49 73.5
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 2.3e-15 86.3 109 50.5
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 2.3e-15 86.3 126 46.0
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 3.0e-15 85.9 72 61.1
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 3.9e-15 85.5 115 47.8
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 3.9e-15 85.5 112 50.0
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 5.1e-15 85.1 112 43.8
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 5.1e-15 85.1 112 43.8
Lalb_Chr25g0279351 Lupinus albus HOM05D007722 ORTHO05D009730 5.1e-15 85.1 93 51.6
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 8.6e-15 84.3 115 47.8
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 8.6e-15 84.3 113 44.2
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 1.1e-14 84.0 118 46.6
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 1.1e-14 84.0 113 43.4
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 1.1e-14 84.0 46 82.6
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 3.3e-14 82.4 115 47.0
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 4.3e-14 82.0 115 46.1
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 5.6e-14 81.6 107 48.6
Eucgr.L02714 Eucalyptus grandis HOM05D007722 ORTHO05D009730 1.6e-13 80.1 100 47.0
Eucgr.F03868 Eucalyptus grandis HOM05D007722 ORTHO05D009730 2.1e-13 79.7 128 44.5
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 2.8e-13 79.3 135 42.2
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 3.6e-13 79.0 103 46.6
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 6.2e-13 78.2 49 71.4
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 1.8e-12 76.6 75 66.7
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 1.8e-12 76.6 134 36.6
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 2.3e-12 76.3 49 73.5
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 3.1e-12 75.9 74 60.8
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 4.0e-12 75.5 70 58.6
Manes.04G113466 Manihot esculenta HOM05D007722 ORTHO05D009730 8.9e-12 74.3 140 45.7
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 8.9e-12 74.3 117 42.7
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 1.2e-11 73.9 48 72.9
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 1.5e-11 73.6 113 42.5
Aqoxy7G03685 Aquilegia oxysepala HOM05D007722 ORTHO05D009730 2.0e-11 73.2 48 70.8
DCAR_025509 Daucus carota HOM05D007722 ORTHO05D009730 5.8e-11 71.6 129 38.0
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 5.8e-11 71.6 47 70.2
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 5.8e-11 71.6 113 48.7
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 5.8e-11 71.6 75 64.0
unitig_0.g1117 Utricularia gibba HOM05D007722 ORTHO05D009730 5.8e-11 71.6 115 41.7
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 1.3e-10 70.5 108 42.6
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 1.7e-10 70.1 124 44.4
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 6.4e-10 68.2 145 40.7
Manes.11G056000 Manihot esculenta HOM05D007722 ORTHO05D009730 1.9e-09 66.6 77 51.9
PSO210G5680 Papaver somniferum HOM05D007722 ORTHO05D009730 2.4e-09 66.2 133 40.6
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 5.4e-09 65.1 92 47.8
Peaxi162Scf00332g00773 Petunia axillaris HOM05D007722 ORTHO05D009730 7.1e-09 64.7 44 65.9
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 1.6e-08 63.5 133 35.3
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 1.6e-08 63.5 138 39.9
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 2.1e-08 63.2 73 46.6
Sc10g0005890 Simmondsia chinensis HOM05D007722 ORTHO05D009730 2.1e-08 63.2 114 37.7
PSO210G0183 Papaver somniferum HOM05D007722 ORTHO05D009730 2.7e-08 62.8 52 61.5
HanXRQChr16g0500401 Helianthus annuus HOM05D007722 ORTHO05D009730 7.8e-08 61.2 46 58.7
CDE07G1717 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 1.3e-07 60.5 108 37.0
Sabra01G0149600 Salix brachista HOM05D007722 ORTHO05D009730 2.3e-07 59.7 38 60.5
BcaC09g48556 Brassica carinata HOM05D007722 ORTHO05D009730 3.0e-07 59.3 87 44.8
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 3.9e-07 58.9 69 46.4
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 5.1e-07 58.5 89 37.1
Carub.0003s1552 Capsella rubella HOM05D007722 ORTHO05D009730 5.1e-07 58.5 113 42.5
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 6.6e-07 58.2 95 41.1
BcaB04g20904 Brassica carinata HOM05D007722 ORTHO05D009730 1.1e-06 57.4 91 46.2
Sp3g14100 Schrenkiella parvula HOM05D007722 ORTHO05D009730 1.1e-06 57.4 96 45.8
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 1.5e-06 57.0 52 50.0
HPP92_000666 Vanilla planifolia HOM05D007722 ORTHO05D009730 1.9e-06 56.6 100 37.0
A01p38330 Brassica napus HOM05D007722 ORTHO05D009730 2.5e-06 56.2 51 47.1
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 5.6e-06 55.1 105 36.2
Aa31LG8G2980 Aethionema arabicum HOM05D007722 ORTHO05D009730 9.6e-06 54.3 124 36.3


User provided reference genes

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