Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 0.0e+00 1253.8 648 100.0
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 0.0e+00 1249.2 648 99.7
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 9.3e-228 793.9 604 69.4
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 2.2e-224 782.7 645 65.6
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 5.3e-223 778.1 655 64.3
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 9.4e-220 767.3 646 63.8
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 2.7e-219 765.8 647 63.5
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 6.1e-219 764.6 638 64.7
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 1.0e-218 763.8 648 61.7
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 5.1e-218 761.5 654 62.8
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 5.7e-217 758.1 649 64.7
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 2.8e-216 755.7 597 65.5
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 8.2e-216 754.2 640 64.7
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 1.8e-215 753.1 589 65.9
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 5.3e-215 751.5 646 61.0
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 9.1e-215 750.7 605 63.0
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 1.2e-214 750.4 624 65.2
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 2.6e-214 749.2 634 64.4
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 2.9e-213 745.7 648 63.0
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 5.0e-213 745.0 652 62.1
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.6e-211 740.0 652 62.0
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 3.6e-211 738.8 652 62.0
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 7.4e-209 731.1 649 62.4
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 1.7e-208 729.9 678 60.6
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 1.7e-208 729.9 642 60.0
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 2.2e-208 729.6 678 60.5
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 1.8e-207 726.5 642 61.5
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 1.8e-207 726.5 652 59.7
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 5.3e-207 724.9 635 62.8
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 9.1e-207 724.2 655 60.0
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 3.8e-205 718.8 692 56.9
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 1.1e-204 717.2 648 59.9
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 5.5e-204 714.9 644 59.6
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 9.4e-204 714.1 636 63.1
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 8.8e-202 707.6 649 60.1
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 2.6e-201 706.1 647 62.3
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 3.3e-201 705.7 645 61.1
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 7.5e-201 704.5 654 61.9
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 6.3e-200 701.4 642 59.2
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 3.1e-199 699.1 648 59.0
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 1.3e-197 693.7 653 58.7
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 1.7e-197 693.3 650 59.8
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 1.7e-197 693.3 650 62.0
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 8.5e-197 691.0 655 57.1
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 1.1e-196 690.6 651 61.3
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 5.5e-196 688.3 648 59.1
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 1.6e-195 686.8 552 63.6
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 6.1e-195 684.9 631 57.1
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 8.0e-195 684.5 655 57.9
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 1.0e-194 684.1 648 59.1
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 1.4e-194 683.7 642 56.9
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.4e-194 683.7 648 59.3
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 3.0e-194 682.6 649 58.7
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 1.5e-193 680.2 648 60.0
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.4e-193 678.7 650 58.3
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.4e-193 678.7 650 58.3
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.1e-191 674.1 648 58.8
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 1.8e-191 673.3 640 56.2
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 1.8e-191 673.3 592 59.8
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 9.1e-191 671.0 648 56.9
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.5e-190 669.1 648 58.6
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 7.7e-190 667.9 648 56.9
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 1.0e-189 667.5 645 56.9
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 1.7e-189 666.8 646 57.3
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.9e-189 666.0 637 60.4
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.9e-189 666.0 637 60.4
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 5.0e-189 665.2 648 56.9
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 6.5e-189 664.8 636 57.7
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 1.9e-188 663.3 650 58.3
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 4.2e-188 662.1 645 55.5
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 1.6e-187 660.2 653 56.7
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 4.7e-187 658.7 656 54.6
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 2.3e-186 656.4 514 62.6
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 2.3e-186 656.4 649 56.1
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 1.2e-185 654.1 650 57.2
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 3.4e-185 652.5 646 56.5
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 2.2e-184 649.8 637 57.0
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 6.3e-184 648.3 626 56.1
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 2.4e-183 646.4 625 55.2
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 1.3e-181 640.6 645 55.7
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 2.3e-181 639.8 659 54.6
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 5.0e-181 638.6 669 53.2
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 1.1e-180 637.5 603 58.2
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 2.8e-179 632.9 654 56.4
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 3.0e-178 629.4 638 54.7
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 6.8e-178 628.2 639 54.9
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 2.9e-176 622.9 648 54.5
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.4e-175 620.5 471 65.0
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 5.9e-174 615.1 435 67.4
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 1.5e-172 610.5 649 54.5
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 1.9e-172 610.1 635 52.6
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 1.8e-170 603.6 549 58.3
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 4.0e-170 602.4 649 53.9
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 5.8e-169 598.6 632 54.4
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 7.0e-167 591.7 638 51.3
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 3.6e-163 579.3 640 53.4
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 2.1e-158 563.5 638 51.7
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 1.7e-149 533.9 645 51.3
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 1.6e-147 527.3 400 63.2
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 9.0e-138 495.0 349 68.2
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 2.4e-130 470.3 343 64.7
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 5.5e-127 459.1 516 49.4
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 1.2e-121 441.4 532 45.5
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 2.7e-118 430.3 466 47.6
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 1.4e-114 417.9 543 42.7
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 3.1e-114 416.8 594 43.3
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 7.2e-111 405.6 559 42.6
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 1.1e-79 302.0 671 30.6
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 4.2e-79 300.1 520 35.8
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 7.3e-63 246.1 505 31.9
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 7.0e-50 203.0 422 31.5
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 1.8e-45 188.3 502 28.5
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 1.8e-29 135.2 98 63.3
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 1.8e-29 135.2 98 63.3
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 1.3e-27 129.0 98 61.2
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 5.4e-18 97.1 501 23.2


User provided reference genes

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