Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G0132 Cannabis sativa HOM05D000051 ORTHO05D010453 5.8e-225 783.9 390 100.0
CANSAT56G4105 Cannabis sativa HOM05D000051 ORTHO05D010453 1.0e-120 437.6 396 61.4
CANSAT56G3036 Cannabis sativa HOM05D000051 ORTHO05D010453 5.8e-108 395.2 405 57.8
CANSAT80G1127 Cannabis sativa HOM05D000051 ORTHO05D010453 2.2e-62 243.8 382 45.0
CANSAT80G0468 Cannabis sativa HOM05D000051 ORTHO05D010453 9.1e-61 238.4 417 42.0
CANSAT80G0613 Cannabis sativa HOM05D000051 ORTHO05D010453 6.5e-59 232.3 421 40.4
CANSAT54G1299 Cannabis sativa HOM05D000051 ORTHO05D010453 7.2e-58 228.8 408 41.2
CANSAT80G2743 Cannabis sativa HOM05D000051 ORTHO05D010453 1.6e-57 227.6 377 43.5
CANSAT80G2502 Cannabis sativa HOM05D000051 ORTHO05D010453 8.0e-57 225.3 389 41.6
CANSAT80G0656 Cannabis sativa HOM05D000051 ORTHO05D010453 4.0e-56 223.0 388 41.5
CANSAT80G1381 Cannabis sativa HOM05D000051 ORTHO05D010453 5.2e-56 222.6 380 41.6
CANSAT80G0772 Cannabis sativa HOM05D000051 ORTHO05D010453 1.5e-55 221.1 398 41.5
CANSAT54G2522 Cannabis sativa HOM05D000051 ORTHO05D010453 4.4e-55 219.5 386 41.2
CANSAT80G0872 Cannabis sativa HOM05D000051 ORTHO05D010453 4.8e-54 216.1 385 40.0
CANSAT54G0219 Cannabis sativa HOM05D000051 ORTHO05D010453 2.4e-53 213.8 397 39.0
CANSAT80G2918 Cannabis sativa HOM05D000051 ORTHO05D010453 4.1e-53 213.0 393 40.5
CANSAT80G2121 Cannabis sativa HOM05D000051 ORTHO05D010453 4.5e-52 209.5 365 43.8
CANSAT80G1555 Cannabis sativa HOM05D000051 ORTHO05D010453 7.7e-52 208.8 426 39.7
CANSAT80G0269 Cannabis sativa HOM05D000051 ORTHO05D010453 2.2e-51 207.2 386 40.9
CANSAT80G2757 Cannabis sativa HOM05D000051 ORTHO05D010453 1.1e-50 204.9 399 39.1
CANSAT80G2150 Cannabis sativa HOM05D000051 ORTHO05D010453 2.5e-50 203.8 392 40.3
CANSAT54G1220 Cannabis sativa HOM05D000051 ORTHO05D010453 3.2e-50 203.4 386 40.7
CANSAT80G0605 Cannabis sativa HOM05D000051 ORTHO05D010453 4.2e-50 203.0 402 38.8
CANSAT80G2327 Cannabis sativa HOM05D000051 ORTHO05D010453 1.2e-49 201.4 398 39.9
CANSAT54G1896 Cannabis sativa HOM05D000051 ORTHO05D010453 1.6e-49 201.1 384 40.1
CANSAT56G0180 Cannabis sativa HOM05D000051 ORTHO05D010453 8.0e-49 198.7 400 39.5
CANSAT80G1164 Cannabis sativa HOM05D000051 ORTHO05D010453 2.3e-48 197.2 390 42.1
CANSAT54G2031 Cannabis sativa HOM05D000051 ORTHO05D010453 3.0e-48 196.8 386 37.0
CANSAT80G1807 Cannabis sativa HOM05D000051 ORTHO05D010453 5.7e-47 192.6 387 39.0
CANSAT80G2895 Cannabis sativa HOM05D000051 ORTHO05D010453 9.8e-47 191.8 316 41.8
CANSAT54G0861 Cannabis sativa HOM05D000051 ORTHO05D010453 1.7e-46 191.0 377 38.7
CANSAT54G2398 Cannabis sativa HOM05D000051 ORTHO05D010453 1.7e-46 191.0 373 38.1
CANSAT54G2718 Cannabis sativa HOM05D000051 ORTHO05D010453 3.7e-46 189.9 393 39.4
CANSAT80G0894 Cannabis sativa HOM05D000051 ORTHO05D010453 5.4e-45 186.0 399 39.1
CANSAT54G2277 Cannabis sativa HOM05D000051 ORTHO05D010453 7.0e-45 185.7 395 35.9
CANSAT54G0844 Cannabis sativa HOM05D000051 ORTHO05D010453 1.3e-43 181.4 388 38.4
CANSAT56G0651 Cannabis sativa HOM05D000051 ORTHO05D010453 1.3e-43 181.4 315 38.1
CANSAT78G1945 Cannabis sativa HOM05D000051 ORTHO05D010453 1.2e-41 174.9 392 36.2
CANSAT54G2109 Cannabis sativa HOM05D000051 ORTHO05D010453 1.5e-39 167.9 372 35.5
CANSAT54G0932 Cannabis sativa HOM05D000051 ORTHO05D010453 2.0e-39 167.5 386 36.3
CANSAT80G2796 Cannabis sativa HOM05D000051 ORTHO05D010453 6.4e-38 162.5 396 37.4
CANSAT54G0089 Cannabis sativa HOM05D000051 ORTHO05D010453 4.6e-36 156.4 410 34.4
CANSAT54G2020 Cannabis sativa HOM05D000051 ORTHO05D010453 1.5e-34 151.4 299 39.5
CANSAT54G0961 Cannabis sativa HOM05D000051 ORTHO05D010453 4.1e-29 133.3 251 37.8
CANSAT80G1775 Cannabis sativa HOM05D000051 ORTHO05D010453 1.6e-28 131.3 176 49.4
CANSAT54G1732 Cannabis sativa HOM05D000051 ORTHO05D010453 4.4e-23 113.2 300 35.7
CANSAT54G2217 Cannabis sativa HOM05D000051 ORTHO05D010453 2.4e-21 107.5 323 32.5
CANSAT54G1500 Cannabis sativa HOM05D000051 ORTHO05D010453 2.7e-20 104.0 226 35.4
CANSAT64G2494 Cannabis sativa HOM05D000051 ORTHO05D001182 2.5e-18 97.4 371 30.5
CANSAT80G2552 Cannabis sativa HOM05D000051 ORTHO05D010453 9.5e-18 95.5 190 41.6
CANSAT54G1497 Cannabis sativa HOM05D000051 ORTHO05D010453 6.2e-17 92.8 198 33.8
MD09G1093500 Malus domestica HOM05D006186 ORTHO05D009138 6.8e-16 89.4 343 26.8
CANSAT54G2289 Cannabis sativa HOM05D000051 ORTHO05D010453 2.9e-14 84.0 182 35.7
MD09G1093600 Malus domestica HOM05D006186 ORTHO05D009138 1.6e-12 78.2 285 27.4
Prupe.3G231800 Prunus persica HOM05D006186 ORTHO05D009138 3.5e-12 77.0 389 26.7
Rhsim08G0241400 Rhododendron simsii HOM05D001477 ORTHO05D001182 1.7e-11 74.7 312 26.6
QL05p032198 Quercus lobata HOM05D001477 ORTHO05D001182 8.6e-11 72.4 340 30.3
FAN09G0139 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.5e-10 71.6 291 28.2
Ciclev10025322m.g Citrus clementina HOM05D001477 ORTHO05D001182 1.9e-10 71.2 258 28.3
Rhsim07G0244500 Rhododendron simsii HOM05D001477 ORTHO05D011640 1.9e-10 71.2 394 25.4
EL10Ac3g05729 Beta vulgaris HOM05D001477 ORTHO05D001182 2.5e-10 70.9 362 23.2
QL05p016344 Quercus lobata HOM05D001477 ORTHO05D001182 5.6e-10 69.7 380 25.3
FvH4_6g44771 Fragaria vesca HOM05D006186 ORTHO05D009138 2.8e-09 67.4 347 25.4
TAR627G0813 Trochodendron aralioides HOM05D000421 ORTHO05D001182 2.8e-09 67.4 357 27.5
RcHm_v2.0_Chr2g0161931 Rosa chinensis HOM05D006186 ORTHO05D009138 6.2e-09 66.2 295 29.5
ClCG07G013540 Citrullus lanatus HOM05D001477 ORTHO05D001182 8.1e-09 65.9 321 26.2
EL10Ac3g05730 Beta vulgaris HOM05D001477 ORTHO05D001182 2.4e-08 64.3 376 23.9
CANSAT56G1219 Cannabis sativa HOM05D000051 ORTHO05D010453 2.4e-08 64.3 191 32.5
FAN14G3517 Fragaria x ananassa HOM05D006186 ORTHO05D009138 3.1e-08 63.9 347 25.1
RcHm_v2.0_Chr2g0161951 Rosa chinensis HOM05D006186 ORTHO05D012372 3.1e-08 63.9 321 25.2
Dinv23707 Davidia involucrata HOM05D001396 ORTHO05D000493 4.0e-08 63.5 282 25.5
Duzib213G0421 Durio zibethinus HOM05D000051 ORTHO05D000015 1.5e-07 61.6 362 24.6
PSO170G5825 Papaver somniferum HOM05D000051 ORTHO05D000015 1.5e-07 61.6 207 30.0
TAR624G0688 Trochodendron aralioides HOM05D001396 ORTHO05D000493 2.0e-07 61.2 271 28.0
Haze_18899 Corylus avellana HOM05D001477 ORTHO05D001182 9.9e-07 58.9 329 25.8
HanXRQChr09g0238591 Helianthus annuus HOM05D001477 ORTHO05D001182 9.9e-07 58.9 357 27.2
TWI18G0117 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 9.9e-07 58.9 280 26.8
RcHm_v2.0_Chr2g0096151 Rosa chinensis HOM05D006186 ORTHO05D009138 2.2e-06 57.8 287 26.1
Medtr4g119700 Medicago truncatula HOM05D001477 ORTHO05D001182 2.9e-06 57.4 369 26.3
Duzib213G0200 Durio zibethinus HOM05D000051 ORTHO05D000015 3.8e-06 57.0 293 25.9
FAN14G1648 Fragaria x ananassa HOM05D006186 ORTHO05D009138 6.4e-06 56.2 277 26.0
Hma1.2p1_0978F.1_g243340 Hydrangea macrophylla HOM05D001477 ORTHO05D001182 6.4e-06 56.2 227 26.0
PSO170G6457 Papaver somniferum HOM05D000051 ORTHO05D000015 8.4e-06 55.8 208 29.3


User provided reference genes

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