Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 4.4e-75 285.0 204 100.0
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 4.8e-45 185.3 172 82.0
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 4.1e-44 182.2 168 82.1
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 2.0e-43 179.9 168 81.5
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 5.5e-41 171.8 172 75.0
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 1.0e-39 167.5 160 81.2
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 1.3e-39 167.2 166 78.9
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 5.1e-39 165.2 169 78.1
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 4.3e-38 162.2 173 76.3
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 9.7e-38 161.0 169 78.1
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 2.8e-37 159.5 160 81.2
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 6.3e-37 158.3 169 75.1
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 1.8e-36 156.8 178 70.8
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 3.1e-36 156.0 172 73.3
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 9.0e-36 154.5 169 72.2
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 1.2e-35 154.1 173 73.4
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 1.5e-35 153.7 166 75.3
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 2.6e-35 152.9 166 75.3
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 3.4e-35 152.5 158 77.2
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 7.7e-35 151.4 168 76.8
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 7.7e-35 151.4 178 70.2
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 2.2e-34 149.8 163 76.7
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 5.0e-34 148.7 168 76.8
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 1.9e-33 146.7 170 72.9
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 1.9e-33 146.7 172 72.1
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 2.5e-33 146.4 173 71.1
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 7.2e-33 144.8 169 72.2
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 1.2e-32 144.1 175 69.1
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 1.6e-32 143.7 160 75.6
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 2.1e-32 143.3 167 76.6
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 2.1e-32 143.3 166 74.1
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 2.1e-32 143.3 172 74.4
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 2.7e-32 142.9 175 72.0
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 2.7e-32 142.9 176 72.7
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 4.6e-32 142.1 172 74.4
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 4.6e-32 142.1 172 74.4
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 4.6e-32 142.1 169 74.6
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 7.9e-32 141.4 180 72.2
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 1.8e-31 140.2 170 73.5
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 3.0e-31 139.4 169 70.4
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 5.1e-31 138.7 163 74.2
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 5.1e-31 138.7 165 75.2
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 1.1e-30 137.5 170 72.4
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 2.6e-30 136.3 169 72.2
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 2.2e-29 133.3 171 67.8
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 4.8e-29 132.1 163 71.8
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 8.2e-29 131.3 177 68.9
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 1.1e-28 131.0 167 70.1
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 9.1e-28 127.9 162 73.5
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 1.5e-27 127.1 140 79.3
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 3.4e-27 125.9 143 74.1
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 4.5e-27 125.6 144 77.1
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 5.9e-27 125.2 143 82.5
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 2.2e-26 123.2 169 71.0
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 5.0e-26 122.1 185 66.5
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 6.5e-26 121.7 185 64.9
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 8.5e-26 121.3 197 61.9
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 1.4e-25 120.6 170 66.5
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 1.9e-25 120.2 167 70.1
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 6.1e-24 115.2 162 67.9
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 7.9e-24 114.8 165 66.7
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 7.9e-24 114.8 164 65.2
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 1.4e-23 114.0 167 70.1
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 1.8e-23 113.6 166 68.1
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 3.9e-23 112.5 165 63.6
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 3.9e-23 112.5 168 66.1
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 5.2e-23 112.1 167 66.5
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 5.2e-23 112.1 175 65.7
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 8.8e-23 111.3 192 59.9
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 1.1e-22 110.9 172 65.7
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 3.3e-22 109.4 164 66.5
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 5.7e-22 108.6 165 64.8
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 7.4e-22 108.2 168 66.1
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 1.7e-21 107.1 174 62.6
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 2.2e-21 106.7 163 65.6
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 2.8e-21 106.3 167 67.1
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 8.2e-21 104.8 166 65.7
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 1.1e-20 104.4 170 61.8
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 1.1e-20 104.4 170 61.8
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 1.4e-20 104.0 166 65.7
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 1.4e-20 104.0 170 61.8
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 1.4e-20 104.0 170 61.8
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 1.4e-20 104.0 154 66.9
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 1.4e-20 104.0 122 78.7
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 1.8e-20 103.6 161 65.8
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 2.4e-20 103.2 170 61.8
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 3.1e-20 102.8 199 57.8
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 3.1e-20 102.8 91 80.2
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 4.1e-20 102.4 167 66.5
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 7.0e-20 101.7 187 60.4
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 9.1e-20 101.3 91 79.1
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 2.6e-19 99.8 67 74.6
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 5.9e-19 98.6 167 62.9
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 7.7e-19 98.2 67 73.1
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 2.2e-18 96.7 167 60.5
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 8.5e-18 94.7 148 64.2
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 8.5e-18 94.7 167 64.7
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 4.2e-17 92.4 163 63.8
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 7.2e-17 91.7 168 61.3
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 8.0e-16 88.2 63 69.8
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 1.4e-15 87.4 63 69.8
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 2.3e-15 86.7 67 61.2
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 5.2e-15 85.5 145 42.1
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 5.7e-14 82.0 91 72.5
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 9.7e-14 81.3 77 55.8
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 2.8e-13 79.7 67 65.7
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 1.4e-12 77.4 67 61.2
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 5.3e-12 75.5 67 59.7
unitig_0.g5 Utricularia gibba HOM05D000887 ORTHO05D000908 2.3e-07 60.1 120 67.5


User provided reference genes

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