Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 4.8e-255 884.0 451 100.0
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 2.1e-165 586.3 463 67.0
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 8.1e-162 574.3 458 65.9
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 1.1e-161 573.9 455 65.7
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 2.6e-160 569.3 451 65.9
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 1.1e-158 563.9 453 65.1
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 1.9e-158 563.1 452 64.8
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 1.9e-158 563.1 458 64.4
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 1.9e-158 563.1 461 65.1
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 4.2e-158 562.0 447 64.9
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 4.2e-158 562.0 461 65.1
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 9.3e-158 560.8 450 64.2
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 7.8e-157 557.8 450 64.4
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 1.7e-156 556.6 455 64.2
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 2.3e-156 556.2 460 63.5
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 3.0e-156 555.8 457 63.7
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.5e-155 553.5 450 63.6
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 3.3e-155 552.4 429 67.1
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 4.3e-155 552.0 421 67.9
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 3.1e-153 545.8 447 64.4
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 4.5e-152 542.0 414 65.9
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 5.8e-152 541.6 454 63.0
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 2.9e-151 539.3 457 62.8
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 7.1e-150 534.6 389 67.4
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 1.8e-148 530.0 391 66.2
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 9.6e-147 524.2 451 62.1
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 9.6e-147 524.2 457 61.3
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 9.6e-147 524.2 458 61.1
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 1.3e-146 523.9 452 59.7
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 2.1e-146 523.1 435 63.9
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 2.1e-146 523.1 443 62.3
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 9.0e-145 517.7 452 61.1
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 2.0e-144 516.5 429 61.5
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 2.2e-143 513.1 423 61.0
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 6.4e-143 511.5 414 62.6
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 2.1e-141 506.5 457 60.0
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 3.3e-139 499.2 456 57.7
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 7.4e-139 498.0 451 59.2
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 3.7e-138 495.7 458 58.5
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 1.1e-137 494.2 455 58.0
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 4.2e-134 482.3 386 63.7
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 1.0e-132 477.6 457 54.7
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 1.3e-132 477.2 447 55.5
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 1.3e-132 477.2 422 58.1
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.5e-131 473.0 452 57.7
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 3.3e-131 472.6 452 57.7
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 4.3e-131 472.2 450 57.8
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 4.3e-131 472.2 452 57.3
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 2.2e-130 469.9 457 56.5
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 2.8e-130 469.5 449 55.7
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 1.4e-129 467.2 458 55.7
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 4.1e-129 465.7 446 56.7
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 6.9e-129 464.9 452 56.2
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 6.9e-129 464.9 449 57.0
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 9.0e-129 464.5 452 56.6
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 9.0e-129 464.5 452 56.4
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 2.0e-128 463.4 450 57.8
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 2.6e-128 463.0 452 56.2
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 2.6e-128 463.0 452 56.2
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 2.6e-128 463.0 422 58.3
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 3.4e-128 462.6 452 55.8
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 1.0e-127 461.1 448 53.3
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 1.0e-127 461.1 457 55.4
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 2.2e-127 459.9 448 53.3
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 3.8e-127 459.1 451 55.9
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 6.5e-127 458.4 390 60.0
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 2.5e-126 456.4 394 58.1
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 1.2e-125 454.1 453 56.1
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 3.0e-124 449.5 468 52.4
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 3.0e-124 449.5 463 54.6
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 5.1e-124 448.7 330 67.0
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 6.7e-124 448.4 463 52.3
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 8.8e-124 448.0 454 53.3
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 1.5e-123 447.2 457 55.8
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 4.3e-123 445.7 455 53.2
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 6.3e-122 441.8 461 53.4
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 1.4e-121 440.7 434 53.9
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 3.1e-121 439.5 394 56.1
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 5.9e-120 435.3 413 57.4
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 1.0e-119 434.5 449 53.0
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 6.5e-119 431.8 459 52.7
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 3.2e-118 429.5 461 51.8
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 7.2e-118 428.3 462 52.6
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 2.7e-117 426.4 467 52.0
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 1.4e-116 424.1 458 52.4
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 3.9e-116 422.5 458 50.7
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 6.7e-116 421.8 461 52.1
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 6.7e-116 421.8 460 50.2
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 2.6e-115 419.9 415 52.3
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 4.4e-115 419.1 390 56.4
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 7.4e-115 418.3 396 56.8
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 9.7e-115 417.9 462 51.7
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 9.7e-115 417.9 462 51.7
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 4.8e-114 415.6 411 54.3
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 8.2e-114 414.8 404 55.0
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 8.2e-114 414.8 346 58.7
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 2.2e-111 406.8 378 54.8
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 7.2e-110 401.7 459 49.7
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 4.1e-105 386.0 349 58.7
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 3.8e-103 379.4 329 63.2
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 1.6e-101 374.0 393 51.1
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 2.7e-101 373.2 364 53.3
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 2.7e-101 373.2 451 49.7
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 1.3e-98 364.4 347 53.3
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 8.8e-92 341.7 441 46.3
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 8.6e-87 325.1 340 54.1
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 5.5e-86 322.4 365 53.7
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 8.0e-85 318.5 259 62.9
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 3.0e-84 316.6 416 45.0
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 1.4e-81 307.8 349 50.4
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 1.1e-78 298.1 230 63.9
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 1.9e-73 280.8 446 39.2
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 2.8e-69 266.9 219 61.6
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 6.2e-69 265.8 416 41.1
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 4.0e-68 263.1 466 43.6
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 2.0e-67 260.8 303 53.1
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 1.9e-62 244.2 220 55.5
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 5.4e-57 226.1 396 38.9
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 4.7e-53 213.0 386 37.3
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 4.0e-52 209.9 404 36.4
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 9.2e-49 198.7 421 35.2
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 1.9e-25 121.3 263 35.0
Cpa.g.sc162.21 Carica papaya HOM05D000369 ORTHO05D007562 9.3e-25 119.0 109 54.1
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 3.3e-22 110.5 304 31.2
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 1.4e-17 95.1 166 33.7
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 7.1e-17 92.8 77 59.7
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 2.1e-16 91.3 402 26.4
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 3.9e-15 87.0 203 31.0
PRCOL_00003529 Prasinoderma coloniale HOM05D006219 ORTHO05D007562 3.7e-13 80.5 396 23.7
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 1.8e-12 78.2 159 32.1
TAR362G0073 Trochodendron aralioides HOM05D001652 ORTHO05D001768 3.0e-07 60.8 78 41.0


User provided reference genes

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