Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2947 Cannabis sativa HOM05D003862 ORTHO05D004398 4.1e-47 191.0 95 100.0
Prupe.6G077400 Prunus persica HOM05D003862 ORTHO05D004398 1.3e-40 169.5 95 89.5
Lj3g0018643 Lotus japonicus HOM05D003862 ORTHO05D004398 2.8e-40 168.3 95 91.6
Cfa011504 Carpinus fangiana HOM05D003862 ORTHO05D004398 3.7e-40 167.9 95 89.5
MD11G1108200 Malus domestica HOM05D003862 ORTHO05D004398 4.8e-40 167.5 95 88.4
RcHm_v2.0_Chr5g0064531 Rosa chinensis HOM05D003862 ORTHO05D004398 4.8e-40 167.5 95 88.4
CiPaw.14G068400 Carya illinoinensis HOM05D003862 ORTHO05D004398 2.4e-39 165.2 95 87.4
Lalb_Chr03g0026631 Lupinus albus HOM05D003862 ORTHO05D004398 2.4e-39 165.2 95 88.4
Lalb_Chr19g0137831 Lupinus albus HOM05D003862 ORTHO05D004398 5.3e-39 164.1 95 87.4
CSS0028919 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 3.4e-38 161.4 95 86.3
CSS0038231 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 3.4e-38 161.4 95 86.3
FvH4_3g36110 Fragaria vesca HOM05D003862 ORTHO05D004398 3.4e-38 161.4 94 86.2
FAN11G3597 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.4e-38 161.4 94 86.2
FAN16G1598 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.4e-38 161.4 94 86.2
FAN21G0907 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.4e-38 161.4 94 86.2
FAN25G1864 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.4e-38 161.4 94 86.2
Oeu014415.1 Olea europaea HOM05D003862 ORTHO05D004398 3.4e-38 161.4 95 86.3
Cc10_g12100 Coffea canephora HOM05D003862 ORTHO05D004398 4.5e-38 161.0 95 86.3
Glyma.11G139400 Glycine max HOM05D003862 ORTHO05D004398 4.5e-38 161.0 95 86.3
Medtr4g063925 Medicago truncatula HOM05D003862 ORTHO05D004398 4.5e-38 161.0 95 86.3
Phvul.011G064100 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 4.5e-38 161.0 95 86.3
PGR119G1270 Punica granatum HOM05D003862 ORTHO05D004398 4.5e-38 161.0 95 85.3
Glyma.12G063000 Glycine max HOM05D003862 ORTHO05D004398 5.9e-38 160.6 95 86.3
Oeu032100.1 Olea europaea HOM05D003862 ORTHO05D004398 7.7e-38 160.2 95 85.3
PGR102G0842 Punica granatum HOM05D003862 ORTHO05D004398 7.7e-38 160.2 95 84.2
Dinv17003 Davidia involucrata HOM05D003862 ORTHO05D004398 1.0e-37 159.8 95 85.3
Dinv42952 Davidia involucrata HOM05D003862 ORTHO05D004398 1.0e-37 159.8 95 85.3
Dinv43148 Davidia involucrata HOM05D003862 ORTHO05D004398 1.0e-37 159.8 95 85.3
Hma1.2p1_0936F.1_g238710 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 1.0e-37 159.8 95 84.2
Hma1.2p1_1513F.1_g287975 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 1.0e-37 159.8 95 84.2
TPR.G14480 Trifolium pratense HOM05D003862 ORTHO05D004398 1.0e-37 159.8 95 87.4
CiPaw.09G192600 Carya illinoinensis HOM05D003862 ORTHO05D004398 1.3e-37 159.5 95 86.3
Prupe.6G255300 Prunus persica HOM05D003862 ORTHO05D004398 1.3e-37 159.5 95 83.2
TAR636G2804 Trochodendron aralioides HOM05D003862 ORTHO05D004398 1.3e-37 159.5 95 85.3
HPP92_018126 Vanilla planifolia HOM05D003862 ORTHO05D004398 1.3e-37 159.5 95 84.2
HPP92_018144 Vanilla planifolia HOM05D003862 ORTHO05D004398 1.3e-37 159.5 95 84.2
CDE07G2069 Ceratophyllum demersum HOM05D003862 ORTHO05D004398 2.2e-37 158.7 95 85.3
Ca_19161_v3 Cicer arietinum L. HOM05D003862 ORTHO05D004398 2.2e-37 158.7 95 84.2
Migut.D00467 Erythranthe guttata HOM05D003862 ORTHO05D004398 2.2e-37 158.7 95 84.2
SalBow5G2575 Salvia bowleyana HOM05D003862 ORTHO05D004398 2.2e-37 158.7 95 84.2
Cfa017379 Carpinus fangiana HOM05D003862 ORTHO05D004398 2.9e-37 158.3 95 85.3
Haze_20791 Corylus avellana HOM05D003862 ORTHO05D004398 2.9e-37 158.3 95 85.3
TAR369G0814 Trochodendron aralioides HOM05D003862 ORTHO05D004398 2.9e-37 158.3 95 84.2
HanXRQChr05g0136091 Helianthus annuus HOM05D003862 ORTHO05D004398 3.8e-37 157.9 94 84.0
Cfa016018 Carpinus fangiana HOM05D000273 ORTHO05D004398 5.0e-37 157.5 95 86.3
MBI05_g22042_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 6.5e-37 157.1 95 83.2
Os12g0571200 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 6.5e-37 157.1 95 83.2
PSO063G5647 Papaver somniferum HOM05D003862 ORTHO05D004398 6.5e-37 157.1 94 81.9
PSO339G2698 Papaver somniferum HOM05D003862 ORTHO05D004398 6.5e-37 157.1 94 81.9
PSO384G2795 Papaver somniferum HOM05D003862 ORTHO05D004398 6.5e-37 157.1 94 81.9
DCAR_030095 Daucus carota HOM05D003862 ORTHO05D004398 8.5e-37 156.8 95 82.1
MD04G1129100 Malus domestica HOM05D003862 ORTHO05D004398 1.1e-36 156.4 95 81.1
GSVIVG01034172001 Vitis vinifera HOM05D003862 ORTHO05D004398 1.4e-36 156.0 95 84.2
Lsat_1_v5_gn_4_177081 Lactuca sativa HOM05D003862 ORTHO05D004398 2.5e-36 155.2 95 82.1
Lsat_1_v5_gn_5_170681 Lactuca sativa HOM05D003862 ORTHO05D004398 2.5e-36 155.2 95 82.1
Hund10643 Selenicereus undatus HOM05D003862 ORTHO05D004398 2.5e-36 155.2 95 81.1
vmacro20157 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 2.5e-36 155.2 95 83.2
GSVIVG01024961001 Vitis vinifera HOM05D003862 ORTHO05D004398 3.2e-36 154.8 95 82.1
MELO3C009258.2 Cucumis melo HOM05D003862 ORTHO05D004398 4.2e-36 154.5 95 81.1
CsaV3_3G034900 Cucumis sativus L. HOM05D003862 ORTHO05D004398 4.2e-36 154.5 95 81.1
Migut.D01636 Erythranthe guttata HOM05D003862 ORTHO05D004398 4.2e-36 154.5 95 81.1
Nitab4.5_0006455g0030 Nicotiana tabacum HOM05D003862 ORTHO05D004398 4.2e-36 154.5 95 82.1
unitig_21.g20465 Utricularia gibba HOM05D003164 ORTHO05D003575 4.2e-36 154.5 94 81.9
AUR62038108 Chenopodium quinoa HOM05D003862 ORTHO05D004398 5.5e-36 154.1 95 80.0
arahy.Tifrunner.gnm1.ann1.Q4VW5J Arachis hypogaea HOM05D003862 ORTHO05D004398 7.2e-36 153.7 95 80.0
ClCG10G021140 Citrullus lanatus HOM05D003862 ORTHO05D004398 7.2e-36 153.7 95 81.1
MD12G1141800 Malus domestica HOM05D003862 ORTHO05D004398 7.2e-36 153.7 95 80.0
Nitab4.5_0000349g0310 Nicotiana tabacum HOM05D003862 ORTHO05D004398 7.2e-36 153.7 95 81.1
Nitab4.5_0001911g0090 Nicotiana tabacum HOM05D003862 ORTHO05D004398 7.2e-36 153.7 95 81.1
Nitab4.5_0002018g0010 Nicotiana tabacum HOM05D003862 ORTHO05D004398 7.2e-36 153.7 95 81.1
unitig_744.g24379 Utricularia gibba HOM05D003862 ORTHO05D004398 1.2e-35 152.9 94 79.8
Ah.02g115390 Amaranthus hybridus HOM05D003862 ORTHO05D004398 1.6e-35 152.5 95 78.9
arahy.Tifrunner.gnm1.ann1.PAA8CG Arachis hypogaea HOM05D003862 ORTHO05D004398 1.6e-35 152.5 95 78.9
TWI31G1113 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 1.6e-35 152.5 95 81.1
AUR62025808 Chenopodium quinoa HOM05D003862 ORTHO05D004398 2.1e-35 152.1 95 78.9
RcHm_v2.0_Chr3g0466561 Rosa chinensis HOM05D003862 ORTHO05D004398 2.1e-35 152.1 96 80.2
Sed0018689 Sechium edule HOM05D003862 ORTHO05D004398 2.1e-35 152.1 95 81.1
TWI36G0288 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 2.1e-35 152.1 95 81.1
Sed0022625 Sechium edule HOM05D003862 ORTHO05D004398 2.7e-35 151.8 95 81.1
TWI75G0870 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 3.6e-35 151.4 95 80.0
Solyc10g086510.2 Solanum lycopersicum HOM05D003862 ORTHO05D004398 4.7e-35 151.0 95 77.9
Sopen10g035890 Solanum pennellii HOM05D003862 ORTHO05D004398 4.7e-35 151.0 95 77.9
EL10Ac5g11591 Beta vulgaris HOM05D003862 ORTHO05D004398 6.1e-35 150.6 95 77.9
TPR.G17728 Trifolium pratense HOM05D003862 ORTHO05D004398 6.1e-35 150.6 95 81.1
CAN.G1195.10 Capsicum annuum HOM05D003862 ORTHO05D004398 7.9e-35 150.2 95 77.9
PGSC0003DMG400019201 Solanum tuberosum HOM05D003862 ORTHO05D004398 7.9e-35 150.2 95 77.9
Peaxi162Scf00330g00415 Petunia axillaris HOM05D003862 ORTHO05D004398 2.3e-34 148.7 95 75.8
ECA248G1530 Erigeron canadensis HOM05D003862 ORTHO05D004398 6.7e-34 147.1 97 76.3
Duzib150G0578 Durio zibethinus HOM05D003862 ORTHO05D004398 1.1e-33 146.4 95 77.9
Potri.012G039100 Populus trichocarpa HOM05D003862 ORTHO05D004398 1.1e-33 146.4 94 77.7
Sabra12G0027600 Salix brachista HOM05D003862 ORTHO05D004398 1.1e-33 146.4 94 77.7
Sc05g0009640 Simmondsia chinensis HOM05D003862 ORTHO05D004398 2.6e-33 145.2 95 74.7
Cpa.g.sc81.150 Carica papaya HOM05D003862 ORTHO05D004398 4.4e-33 144.4 95 77.9
Duzib168G1372 Durio zibethinus HOM05D003862 ORTHO05D004398 4.4e-33 144.4 95 76.8
Duzib170G0179 Durio zibethinus HOM05D003862 ORTHO05D004398 4.4e-33 144.4 95 76.8
Thhalv10002743m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 5.7e-33 144.1 95 75.8
Sp2g01740 Schrenkiella parvula HOM05D003862 ORTHO05D004398 5.7e-33 144.1 95 75.8
AT3G46560 Arabidopsis thaliana HOM05D003862 ORTHO05D004398 7.4e-33 143.7 95 75.8
Gohir.D03G125700 Gossypium hirsutum HOM05D003862 ORTHO05D004398 7.4e-33 143.7 95 76.8
Gohir.D13G233100 Gossypium hirsutum HOM05D003862 ORTHO05D004398 7.4e-33 143.7 95 76.8
Gorai.003G131900 Gossypium raimondii HOM05D003862 ORTHO05D004398 7.4e-33 143.7 95 76.8
Gorai.013G263900 Gossypium raimondii HOM05D003862 ORTHO05D004398 7.4e-33 143.7 95 76.8
Thecc.09G321500 Theobroma cacao HOM05D003862 ORTHO05D004398 7.4e-33 143.7 95 76.8
Carub.0005s1283 Capsella rubella HOM05D003862 ORTHO05D004398 1.3e-32 142.9 95 75.8
COL.COLO4_18508 Corchorus olitorius HOM05D003862 ORTHO05D004398 1.3e-32 142.9 95 76.8
Thhalv10023780m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 1.3e-32 142.9 95 74.7
MD03G1093400 Malus domestica HOM05D003862 ORTHO05D004398 1.3e-32 142.9 82 86.6
THA.LOC104810779 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 1.3e-32 142.9 95 75.8
THA.LOC104799442 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 1.7e-32 142.5 95 75.8
Gohir.A03G042066 Gossypium hirsutum HOM05D003862 ORTHO05D004398 2.2e-32 142.1 95 75.8
Gohir.A13G227500 Gossypium hirsutum HOM05D003862 ORTHO05D004398 2.8e-32 141.7 95 75.8
AL5G25420 Arabidopsis lyrata HOM05D003862 ORTHO05D004398 3.7e-32 141.4 95 74.7
Actinidia05313 Actinidia chinensis HOM05D003862 ORTHO05D004398 6.3e-32 140.6 88 80.7
BcaC02g10413 Brassica carinata HOM05D003862 ORTHO05D004398 6.3e-32 140.6 95 73.7
C04p29160 Brassica napus HOM05D003862 ORTHO05D004398 6.3e-32 140.6 95 73.7
BolC4t24450H Brassica oleracea HOM05D003862 ORTHO05D004398 6.3e-32 140.6 95 73.7
Ciclev10029679m.g Citrus clementina HOM05D003862 ORTHO05D004398 6.3e-32 140.6 95 74.7
BcaC04g22454 Brassica carinata HOM05D003862 ORTHO05D004398 8.2e-32 140.2 95 72.6
A09p15900 Brassica napus HOM05D003862 ORTHO05D004398 8.2e-32 140.2 95 72.6
C09p19140 Brassica napus HOM05D003862 ORTHO05D004398 8.2e-32 140.2 95 72.6
BolC9t54821H Brassica oleracea HOM05D003862 ORTHO05D004398 8.2e-32 140.2 95 72.6
BraA09t37226Z Brassica rapa HOM05D003862 ORTHO05D004398 8.2e-32 140.2 95 72.6
FAN02G2377 Fragaria x ananassa HOM05D003862 ORTHO05D004398 8.2e-32 140.2 95 74.7
FAN09G4075 Fragaria x ananassa HOM05D003862 ORTHO05D004398 8.2e-32 140.2 95 74.7
HanXRQChr01g0009491 Helianthus annuus HOM05D003862 ORTHO05D004398 8.2e-32 140.2 91 76.9
Rhsim05G0192800 Rhododendron simsii HOM05D003862 ORTHO05D004398 8.2e-32 140.2 118 66.1
CARHR155240 Cardamine hirsuta HOM05D003862 ORTHO05D004398 1.1e-31 139.8 95 73.7
FvH4_6g13690 Fragaria vesca HOM05D003862 ORTHO05D004398 1.1e-31 139.8 95 74.7
Hund04959 Selenicereus undatus HOM05D003862 ORTHO05D004398 1.4e-31 139.4 95 70.5
Carub.0003s2691 Capsella rubella HOM05D003862 ORTHO05D004398 1.8e-31 139.0 95 73.7
Aa31LG4G15560 Aethionema arabicum HOM05D003862 ORTHO05D004398 4.1e-31 137.9 95 71.6
A03p68180 Brassica napus HOM05D003862 ORTHO05D004398 4.1e-31 137.9 95 72.6
BraA01t02647Z Brassica rapa HOM05D003862 ORTHO05D004398 4.1e-31 137.9 95 72.6
BcaB07g31364 Brassica carinata HOM05D003862 ORTHO05D004398 5.3e-31 137.5 95 71.6
VMungo1127G0240 Vigna mungo HOM05D003862 ORTHO05D004398 5.3e-31 137.5 82 85.4
Aa31sc23G440 Aethionema arabicum HOM05D003862 ORTHO05D004398 7.0e-31 137.1 95 71.6
Peaxi162Scf01517g00013 Petunia axillaris HOM05D003862 ORTHO05D004398 7.0e-31 137.1 93 72.0
Manes.02G133100 Manihot esculenta HOM05D003862 ORTHO05D004398 9.1e-31 136.7 94 73.4
AagrBONN_evm.TU.Sc2ySwM_368.1516 Anthoceros agrestis HOM05D003862 ORTHO05D004398 2.6e-30 135.2 87 73.6
Manes.01G173900 Manihot esculenta HOM05D003862 ORTHO05D004398 2.6e-30 135.2 94 72.3
Pp3c24_15930 Physcomitrium patens HOM05D003862 ORTHO05D004398 5.9e-30 134.0 87 74.7
ATR0559G041 Amborella trichopoda HOM05D003862 ORTHO05D004398 1.3e-29 132.9 82 78.0
Actinidia11257 Actinidia chinensis HOM05D003862 ORTHO05D004398 8.5e-29 130.2 77 85.7
vmacro08654 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 1.9e-28 129.0 151 51.0
arahy.Tifrunner.gnm1.ann1.817FQF Arachis hypogaea HOM05D003862 ORTHO05D004398 3.2e-28 128.3 92 70.7
arahy.Tifrunner.gnm1.ann1.JG2TRE Arachis hypogaea HOM05D003862 ORTHO05D004398 3.2e-28 128.3 92 70.7
Haze_24096 Corylus avellana HOM05D003862 ORTHO05D004398 3.2e-28 128.3 76 82.9
Mapoly0020s0168 Marchantia polymorpha HOM05D003862 ORTHO05D004398 4.2e-28 127.9 87 67.8
QL01p031927 Quercus lobata HOM05D003862 ORTHO05D004398 1.2e-27 126.3 62 95.2
Aqoxy4G02928 Aquilegia oxysepala HOM05D003862 ORTHO05D004398 1.6e-27 125.9 94 64.9
arahy.Tifrunner.gnm1.ann1.GD7L84 Arachis hypogaea HOM05D003862 ORTHO05D004398 1.6e-27 125.9 92 69.6
Pp3c20_6200 Physcomitrium patens HOM05D003862 ORTHO05D004398 2.7e-27 125.2 87 70.1
arahy.Tifrunner.gnm1.ann1.L1N949 Arachis hypogaea HOM05D003862 ORTHO05D004398 3.6e-27 124.8 92 68.5
Glyma.03G082300 Glycine max HOM05D003862 ORTHO05D004398 3.6e-27 124.8 94 63.8
Phvul.L001624 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 3.6e-27 124.8 94 64.9
Lj3g0015625 Lotus japonicus HOM05D003862 ORTHO05D004398 1.8e-26 122.5 94 63.8
Nn2g14532 Nelumbo nucifera HOM05D003862 ORTHO05D004398 4.0e-26 121.3 69 84.1
QL07p048307 Quercus lobata HOM05D003862 ORTHO05D004398 4.0e-26 121.3 159 47.2
PGR004G0102 Punica granatum HOM05D003862 ORTHO05D004398 2.6e-25 118.6 91 65.9
Sc20g0004910 Simmondsia chinensis HOM05D003862 ORTHO05D004398 2.6e-25 118.6 63 88.9
SMO367G0781 Selaginella moellendorffii HOM05D003862 ORTHO05D004398 4.4e-25 117.9 83 67.5
Dinv37171 Davidia involucrata HOM05D003862 ORTHO05D004398 5.7e-25 117.5 62 90.3
Eucgr.A01265 Eucalyptus grandis HOM05D003862 ORTHO05D004398 5.7e-25 117.5 88 67.0
CAN.G326.7 Capsicum annuum HOM05D003862 ORTHO05D004398 1.3e-24 116.3 63 85.7
SalBow2G1777 Salvia bowleyana HOM05D003862 ORTHO05D004398 1.3e-24 116.3 93 61.3
FAN27G3302 Fragaria x ananassa HOM05D003862 ORTHO05D004398 4.8e-24 114.4 95 63.2
TPR.G5603 Trifolium pratense HOM05D003862 ORTHO05D004398 8.2e-24 113.6 94 58.5
CBR_g46834 Chara braunii HOM05D003862 ORTHO05D004398 1.4e-23 112.8 95 57.9
Psat7g239120 Pisum sativum HOM05D003862 ORTHO05D004398 9.1e-23 110.2 94 55.3
MCO12G250 Micromonas commoda HOM05D003862 ORTHO05D004398 1.2e-22 109.8 93 57.0
unitig_6.g29269 Utricularia gibba HOM05D003862 ORTHO05D004398 7.7e-22 107.1 94 59.6
unitig_747.g21430 Utricularia gibba HOM05D003862 ORTHO05D004398 7.7e-22 107.1 94 59.6
MBI14_g20103_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 2.9e-21 105.1 95 64.2
FAN14G4115 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.1e-20 103.2 95 62.1
Solyc08g048070.1 Solanum lycopersicum HOM05D003862 ORTHO05D004398 4.2e-20 101.3 67 71.6
Peaxi162Scf00165g00129 Petunia axillaris HOM05D003862 ORTHO05D004398 1.0e-18 96.7 85 61.2
PRCOL_00005138 Prasinoderma coloniale HOM05D003862 ORTHO05D004398 1.1e-15 86.7 79 49.4
Cre01.g033400 Chlamydomonas reinhardtii HOM05D003862 ORTHO05D004398 7.7e-14 80.5 73 47.9
Os05g0111100 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 4.2e-12 74.7 78 46.2
Medtr4g021715 Medicago truncatula HOM05D003862 ORTHO05D004398 9.5e-12 73.6 94 43.6


User provided reference genes

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