Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2866 Cannabis sativa HOM05D003732 ORTHO05D004965 2.0e-183 645.6 319 100.0
Duzib168G0288 Durio zibethinus HOM05D003732 ORTHO05D004965 1.6e-140 503.1 317 78.2
Manes.11G138400 Manihot esculenta HOM05D003732 ORTHO05D004965 5.2e-139 498.0 317 77.6
Thecc.09G335200 Theobroma cacao HOM05D003732 ORTHO05D004965 1.5e-138 496.5 317 78.2
Haze_23969 Corylus avellana HOM05D003732 ORTHO05D004965 2.6e-138 495.7 317 77.0
Cfa011398 Carpinus fangiana HOM05D003732 ORTHO05D004965 1.3e-137 493.4 317 77.0
QL01p035526 Quercus lobata HOM05D003732 ORTHO05D004965 1.9e-136 489.6 316 75.9
COL.COLO4_18395 Corchorus olitorius HOM05D003732 ORTHO05D004965 7.1e-136 487.6 317 76.0
Cpa.g.sc139.33 Carica papaya HOM05D003732 ORTHO05D004965 6.0e-135 484.6 317 74.8
Dinv06348 Davidia involucrata HOM05D003732 ORTHO05D004965 1.7e-134 483.0 317 75.7
FAN11G1631 Fragaria x ananassa HOM05D003732 ORTHO05D004965 3.0e-134 482.3 318 75.5
Gorai.003G139600 Gossypium raimondii HOM05D003732 ORTHO05D004965 8.6e-134 480.7 317 75.1
MD03G1107400 Malus domestica HOM05D003732 ORTHO05D004965 1.1e-133 480.3 316 75.3
CSS0050219 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 1.5e-133 479.9 317 73.8
RcHm_v2.0_Chr5g0061771 Rosa chinensis HOM05D003732 ORTHO05D004965 2.5e-133 479.2 317 74.1
Gohir.D03G132600 Gossypium hirsutum HOM05D003732 ORTHO05D004965 3.3e-133 478.8 317 74.8
GSVIVG01025089001 Vitis vinifera HOM05D003732 ORTHO05D004965 3.3e-133 478.8 317 74.8
Ciclev10028610m.g Citrus clementina HOM05D003732 ORTHO05D004965 1.2e-132 476.9 317 74.4
Prupe.6G090200 Prunus persica HOM05D003732 ORTHO05D004965 1.2e-132 476.9 316 74.4
Atru.chr3.3750 Acer truncatum HOM05D003732 ORTHO05D004965 1.6e-132 476.5 317 73.8
FvH4_3g34120 Fragaria vesca HOM05D003732 ORTHO05D004965 1.6e-132 476.5 317 74.1
Gohir.A03G035700 Gossypium hirsutum HOM05D003732 ORTHO05D004965 1.6e-132 476.5 319 74.6
CiPaw.13G104000 Carya illinoinensis HOM05D003732 ORTHO05D004965 4.7e-132 474.9 312 75.0
MELO3C026850.2 Cucumis melo HOM05D003732 ORTHO05D004965 1.4e-131 473.4 317 73.5
PGR102G1443 Punica granatum HOM05D003732 ORTHO05D004965 1.4e-131 473.4 317 72.6
vmacro14491 Vaccinium macrocarpon HOM05D003732 ORTHO05D004965 4.0e-131 471.9 335 71.0
Potri.001G233300 Populus trichocarpa HOM05D003732 ORTHO05D004965 6.8e-131 471.1 317 74.4
FAN21G0728 Fragaria x ananassa HOM05D003732 ORTHO05D004965 8.9e-131 470.7 318 74.2
Lj2C1044T10 Lonicera japonica HOM05D003732 ORTHO05D004965 8.9e-131 470.7 370 67.0
CsaV3_1G012760 Cucumis sativus L. HOM05D003732 ORTHO05D004965 4.4e-130 468.4 317 72.2
FAN16G2257 Fragaria x ananassa HOM05D003732 ORTHO05D004965 7.6e-130 467.6 318 73.9
CSS0010801 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 9.9e-130 467.2 346 68.2
Oeu051855.1 Olea europaea HOM05D003732 ORTHO05D004965 9.9e-130 467.2 317 73.5
Migut.D02165 Erythranthe guttata HOM05D003732 ORTHO05D004965 1.7e-129 466.5 317 72.9
TAR633G0632 Trochodendron aralioides HOM05D003732 ORTHO05D004965 1.7e-129 466.5 317 72.2
Medtr2g095840 Medicago truncatula HOM05D003732 ORTHO05D004965 4.9e-129 464.9 317 72.2
TWI79G1305 Tripterygium wilfordii HOM05D003732 ORTHO05D004965 1.4e-128 463.4 317 73.8
Hund18963 Selenicereus undatus HOM05D003732 ORTHO05D004965 1.9e-128 463.0 317 72.2
Sabra16G0139500 Salix brachista HOM05D003732 ORTHO05D004965 2.4e-128 462.6 325 72.6
Ca_01368_v3 Cicer arietinum L. HOM05D003732 ORTHO05D004965 5.4e-128 461.5 317 71.3
TPR.G11613 Trifolium pratense HOM05D003732 ORTHO05D004965 5.4e-128 461.5 317 71.9
EL10Ac7g15885 Beta vulgaris HOM05D003732 ORTHO05D004965 7.1e-128 461.1 317 71.3
Cc01_g11890 Coffea canephora HOM05D003732 ORTHO05D004965 9.2e-128 460.7 317 71.6
Phvul.L001386 Phaseolus vulgaris HOM05D003732 ORTHO05D004965 1.2e-127 460.3 317 72.2
AUR62036244 Chenopodium quinoa HOM05D003732 ORTHO05D004965 2.1e-127 459.5 317 71.6
Sed0004042 Sechium edule HOM05D003732 ORTHO05D004965 2.7e-127 459.1 317 71.9
ECA236G0640 Erigeron canadensis HOM05D003732 ORTHO05D004965 4.6e-127 458.4 317 71.3
SalBow3G0013 Salvia bowleyana HOM05D003732 ORTHO05D004965 6.0e-127 458.0 315 72.7
VMungo1080G0314 Vigna mungo HOM05D003732 ORTHO05D004965 7.8e-127 457.6 317 72.2
Peaxi162Scf00616g00312 Petunia axillaris HOM05D003732 ORTHO05D004965 1.0e-126 457.2 321 69.8
SGA_v2.0_scaffold316G48397 Striga asiatica HOM05D003732 ORTHO05D004965 1.0e-126 457.2 351 67.0
Lj3g0021313 Lotus japonicus HOM05D003732 ORTHO05D004965 1.7e-126 456.4 317 71.0
Glyma.13G330100 Glycine max HOM05D003732 ORTHO05D004965 3.9e-126 455.3 317 71.3
AUR62009702 Chenopodium quinoa HOM05D003732 ORTHO05D004965 5.1e-126 454.9 317 70.7
Thhalv10002573m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 5.1e-126 454.9 317 71.0
Aa31LG4G14990 Aethionema arabicum HOM05D003732 ORTHO05D004965 8.6e-126 454.1 317 70.0
BcaC09g49713 Brassica carinata HOM05D003732 ORTHO05D004965 8.6e-126 454.1 317 70.3
CARHR149900 Cardamine hirsuta HOM05D003732 ORTHO05D004965 1.5e-125 453.4 317 69.4
AT3G45770 Arabidopsis thaliana HOM05D003732 ORTHO05D004965 2.5e-125 452.6 317 70.0
Lsat_1_v5_gn_8_76381 Lactuca sativa HOM05D003732 ORTHO05D004965 2.5e-125 452.6 313 69.6
Carub.0005s1163 Capsella rubella HOM05D003732 ORTHO05D004965 3.3e-125 452.2 317 70.3
Hma1.2p1_2042F.1_g312240 Hydrangea macrophylla HOM05D003732 ORTHO05D004965 3.3e-125 452.2 339 68.1
Nn2g10611 Nelumbo nucifera HOM05D003732 ORTHO05D004965 3.3e-125 452.2 317 69.7
Aqoxy4G03155 Aquilegia oxysepala HOM05D003732 ORTHO05D004965 5.6e-125 451.4 317 70.7
Sp5g15750 Schrenkiella parvula HOM05D003732 ORTHO05D004965 1.2e-124 450.3 317 70.3
SpUn0096_0020 Schrenkiella parvula HOM05D003732 ORTHO05D004965 1.2e-124 450.3 317 70.3
PGSC0003DMG400025357 Solanum tuberosum HOM05D003732 ORTHO05D004965 1.6e-124 449.9 317 68.5
C01p33680 Brassica napus HOM05D003732 ORTHO05D004965 2.1e-124 449.5 318 69.8
Nitab4.5_0003743g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 2.8e-124 449.1 325 68.0
Solyc11g072640.3 Solanum lycopersicum HOM05D003732 ORTHO05D004965 2.8e-124 449.1 317 68.5
BcaB05g24098 Brassica carinata HOM05D003732 ORTHO05D004965 3.6e-124 448.7 317 69.4
Nitab4.5_0004465g0030 Nicotiana tabacum HOM05D003732 ORTHO05D004965 4.7e-124 448.4 325 67.7
A01p26450 Brassica napus HOM05D003732 ORTHO05D004965 6.2e-124 448.0 318 69.8
BraA01t02569Z Brassica rapa HOM05D003732 ORTHO05D004965 6.2e-124 448.0 318 69.8
CSS0019034 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 6.2e-124 448.0 341 67.7
Psat5g281400 Pisum sativum HOM05D003732 ORTHO05D004965 1.1e-123 447.2 317 69.7
AL5G24450 Arabidopsis lyrata HOM05D003732 ORTHO05D004965 1.4e-123 446.8 317 69.4
MBI19_g13322_MAGBIO Magnolia biondii HOM05D003732 ORTHO05D004965 4.0e-123 445.3 317 70.0
Sopen11g030310 Solanum pennellii HOM05D003732 ORTHO05D004965 4.0e-123 445.3 317 67.5
arahy.Tifrunner.gnm1.ann1.B493EM Arachis hypogaea HOM05D003732 ORTHO05D004965 8.9e-123 444.1 332 68.4
PSO384G0746 Papaver somniferum HOM05D003732 ORTHO05D004965 1.2e-122 443.7 317 68.1
ClCG03G002100 Citrullus lanatus HOM05D003732 ORTHO05D004965 2.0e-122 443.0 304 72.4
arahy.Tifrunner.gnm1.ann1.58CB50 Arachis hypogaea HOM05D003732 ORTHO05D004965 3.4e-122 442.2 317 70.3
HanXRQChr05g0133971 Helianthus annuus HOM05D003732 ORTHO05D004965 4.4e-122 441.8 317 68.1
PSO339G6685 Papaver somniferum HOM05D003732 ORTHO05D004965 4.4e-122 441.8 317 67.8
HanXRQChr05g0133981 Helianthus annuus HOM05D003732 ORTHO05D004965 2.2e-121 439.5 316 68.0
HPP92_018603 Vanilla planifolia HOM05D003732 ORTHO05D004965 3.8e-121 438.7 317 66.9
ATR0594G008 Amborella trichopoda HOM05D003732 ORTHO05D004965 1.4e-120 436.8 317 68.1
DCAR_005290 Daucus carota HOM05D003732 ORTHO05D004965 1.4e-120 436.8 317 68.1
HanXRQChr06g0175491 Helianthus annuus HOM05D003732 ORTHO05D004965 1.9e-120 436.4 317 67.5
Zm00001eb171040 Zea mays HOM05D003732 ORTHO05D004965 5.4e-120 434.9 319 66.8
BolC1t03315H Brassica oleracea HOM05D003732 ORTHO05D004965 1.7e-118 429.9 307 69.1
FAN25G0838 Fragaria x ananassa HOM05D003732 ORTHO05D004965 1.9e-117 426.4 317 68.8
Thhalv10025585m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 2.1e-116 422.9 321 64.5
unitig_736.g22424 Utricularia gibba HOM05D003732 ORTHO05D004965 6.2e-116 421.4 317 65.3
Ah.15g096680 Amaranthus hybridus HOM05D003732 ORTHO05D004965 7.1e-112 407.9 306 65.7
PSO170G1826 Papaver somniferum HOM05D003732 ORTHO05D004965 3.3e-109 399.1 317 61.8
CAN.G84.24 Capsicum annuum HOM05D003732 ORTHO05D004965 1.6e-108 396.7 317 63.1
Nitab4.5_0004465g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 1.1e-107 394.0 312 64.7
CAN.G84.25 Capsicum annuum HOM05D003732 ORTHO05D004965 2.7e-103 379.4 322 61.2
Nitab4.5_0003743g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 2.3e-102 376.3 317 62.8
Nitab4.5_0004465g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 2.3e-102 376.3 317 59.6
CDE09G1079 Ceratophyllum demersum HOM05D003732 ORTHO05D004965 3.0e-102 375.9 286 64.0
Sopen12g032610 Solanum pennellii HOM05D003732 ORTHO05D004965 3.0e-102 375.9 317 60.6
Solyc12g096780.2 Solanum lycopersicum HOM05D003732 ORTHO05D004965 2.5e-101 372.9 317 60.3
Sopen11g030320 Solanum pennellii HOM05D003732 ORTHO05D004965 3.3e-101 372.5 317 58.4
CAN.G84.23 Capsicum annuum HOM05D003732 ORTHO05D004965 3.7e-100 369.0 319 59.2
Sc06g0008130 Simmondsia chinensis HOM05D003732 ORTHO05D004965 2.1e-95 353.2 246 72.0
SEGI_28331 Sequoiadendron giganteum HOM05D003732 ORTHO05D004965 3.5e-95 352.4 285 61.1
Rhsim01G0223000 Rhododendron simsii HOM05D003732 ORTHO05D004965 7.9e-87 324.7 334 54.2
ATR0594G235 Amborella trichopoda HOM05D003732 ORTHO05D004965 8.7e-86 321.2 245 66.1
Peaxi162Scf00616g00313 Petunia axillaris HOM05D003732 ORTHO05D004965 2.8e-84 316.2 290 59.0
BcaB05g22412 Brassica carinata HOM05D003732 ORTHO05D004965 2.6e-82 309.7 271 60.9
Peaxi162Scf00616g00319 Petunia axillaris HOM05D003732 ORTHO05D004965 1.0e-81 307.8 318 53.1
SMO367G0374 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 1.3e-81 307.4 317 49.8
Pp3c9_8960 Physcomitrium patens HOM05D003732 ORTHO05D004965 5.0e-81 305.4 317 49.2
CBR_g29478 Chara braunii HOM05D003732 ORTHO05D004965 3.2e-72 276.2 317 46.4
SHI43202 Sapria himalayana HOM05D003732 ORTHO05D004965 6.3e-68 261.9 243 56.0
PGSC0003DMG402029257 Solanum tuberosum HOM05D003732 ORTHO05D004965 1.9e-64 250.4 217 57.1
Cre01.g035350 Chlamydomonas reinhardtii HOM05D003732 ORTHO05D004965 5.5e-56 222.2 286 43.0
PGSC0003DMG401029354 Solanum tuberosum HOM05D003732 ORTHO05D004965 7.2e-56 221.9 194 58.2
Lalb_Chr24g0394381 Lupinus albus HOM05D003732 ORTHO05D004965 5.7e-53 212.2 121 82.6
Eucgr.B02444 Eucalyptus grandis HOM05D003732 ORTHO05D004965 1.6e-50 204.1 136 69.9
ATR0594G185 Amborella trichopoda HOM05D003732 ORTHO05D004965 5.5e-48 195.7 138 68.1
AagrBONN_evm.TU.Sc2ySwM_344.1470 Anthoceros agrestis HOM05D003732 ORTHO05D004965 1.7e-41 174.1 196 47.4
Eucgr.B02443 Eucalyptus grandis HOM05D003732 ORTHO05D004965 1.7e-41 174.1 136 61.8
Glyma.15G043900 Glycine max HOM05D003732 ORTHO05D004965 4.3e-40 169.5 102 79.4
MSTRG.18619 Avicennia marina HOM05D003732 ORTHO05D004965 1.8e-38 164.1 94 78.7
Cfa026351 Carpinus fangiana HOM05D003732 ORTHO05D004965 3.5e-34 149.8 353 32.3
Haze_26759 Corylus avellana HOM05D003732 ORTHO05D004965 3.5e-34 149.8 277 32.9
Os12g0102100 Oryza sativa ssp. japonica HOM05D003732 ORTHO05D004965 4.9e-28 129.4 98 63.3
Cfa024534 Carpinus fangiana HOM05D003732 ORTHO05D004965 4.1e-27 126.3 331 28.7
MCO04G436 Micromonas commoda HOM05D003732 ORTHO05D004965 5.0e-25 119.4 304 29.9
MCO07G380 Micromonas commoda HOM05D003732 ORTHO05D004965 8.6e-25 118.6 299 31.1
SMO358G0684 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 4.3e-24 116.3 275 28.0
SMO358G0103 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 6.2e-23 112.5 313 29.4
PRCOL_00004177 Prasinoderma coloniale HOM05D003732 ORTHO05D004965 8.1e-23 112.1 297 30.6
Pp3c1_40480 Physcomitrium patens HOM05D003732 ORTHO05D004965 2.9e-20 103.6 274 27.4
SMO196G0264 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 4.9e-20 102.8 323 25.4
SMO358G0184 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 6.4e-20 102.4 313 28.8
PGSC0003DMG400029352 Solanum tuberosum HOM05D003732 ORTHO05D004965 6.0e-18 95.9 114 47.4
Cre02.g116550 Chlamydomonas reinhardtii HOM05D003732 ORTHO05D004965 2.3e-17 94.0 293 28.0
Pp3c21_14810 Physcomitrium patens HOM05D003732 ORTHO05D004965 4.3e-16 89.7 287 26.8
SMO239G0017 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 5.6e-16 89.4 232 27.6
SMO118G0022 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 7.3e-16 89.0 246 26.8
PGSC0003DMG402029354 Solanum tuberosum HOM05D003732 ORTHO05D004965 2.1e-15 87.4 49 73.5
Lalb_Chr24g0394361 Lupinus albus HOM05D003732 ORTHO05D004965 4.0e-14 83.2 46 80.4
Cre11.g476550 Chlamydomonas reinhardtii HOM05D003732 ORTHO05D004965 5.2e-14 82.8 304 25.3
AagrBONN_evm.TU.Sc2ySwM_228.5018 Anthoceros agrestis HOM05D003732 ORTHO05D014000 1.2e-13 81.6 138 35.5
Pp3c17_6460 Physcomitrium patens HOM05D003732 ORTHO05D014000 2.9e-12 77.0 155 30.3
SMO340G0035 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 4.9e-12 76.3 239 25.5
Medtr8g099510 Medicago truncatula HOM05D003732 ORTHO05D004965 2.4e-11 73.9 46 71.7
Mapoly0073s0049 Marchantia polymorpha HOM05D003732 ORTHO05D004965 3.2e-11 73.6 256 23.8
Mapoly0071s0075 Marchantia polymorpha HOM05D003732 ORTHO05D004965 1.6e-10 71.2 250 25.6
SMO067G0006 Selaginella moellendorffii HOM05D003732 ORTHO05D030126 3.5e-10 70.1 256 22.3
Nn3g16769 Nelumbo nucifera HOM05D003732 ORTHO05D014000 7.8e-10 68.9 174 30.5
AagrBONN_evm.TU.Sc2ySwM_117.955 Anthoceros agrestis HOM05D003732 ORTHO05D004965 1.3e-09 68.2 285 24.6
Mapoly2449s0001 Marchantia polymorpha HOM05D003732 ORTHO05D004965 6.6e-09 65.9 243 25.9
Haze_07546 Corylus avellana HOM05D003732 ORTHO05D014000 1.5e-08 64.7 172 28.5
Pp3c1_29590 Physcomitrium patens HOM05D003732 ORTHO05D004965 2.5e-08 63.9 160 27.5
GSVIVG01007696001 Vitis vinifera HOM05D003732 ORTHO05D014000 2.5e-08 63.9 163 29.4
Cfa019169 Carpinus fangiana HOM05D003732 ORTHO05D014000 3.3e-08 63.5 172 28.5
AagrBONN_evm.TU.Sc2ySwM_117.3460 Anthoceros agrestis HOM05D003732 ORTHO05D004965 5.6e-08 62.8 200 25.0
Aqoxy3G01103 Aquilegia oxysepala HOM05D003732 ORTHO05D014000 9.6e-08 62.0 161 29.8
Oeu006959.1 Olea europaea HOM05D004246 ORTHO05D005035 3.6e-07 60.1 296 22.6
Dinv24812 Davidia involucrata HOM05D003732 ORTHO05D014000 8.1e-07 58.9 161 28.0
CDE07G2061 Ceratophyllum demersum HOM05D003732 ORTHO05D014000 1.4e-06 58.2 166 27.1
Aa31LG10G4360 Aethionema arabicum HOM05D004246 ORTHO05D005035 1.8e-06 57.8 302 21.9
BcaB04g17303 Brassica carinata HOM05D004246 ORTHO05D005035 3.1e-06 57.0 302 21.9
A08p03640 Brassica napus HOM05D004246 ORTHO05D005035 4.0e-06 56.6 302 22.5
Thhalv10011316m.g Eutrema salsugineum HOM05D004246 ORTHO05D005035 4.0e-06 56.6 302 22.2
C06p04490 Brassica napus HOM05D004246 ORTHO05D005035 5.2e-06 56.2 302 21.9
HPP92_021842 Vanilla planifolia HOM05D003732 ORTHO05D014000 5.2e-06 56.2 155 27.1
BcaC07g37017 Brassica carinata HOM05D004246 ORTHO05D005035 6.8e-06 55.8 302 22.2
Sp1g36530 Schrenkiella parvula HOM05D004246 ORTHO05D005035 6.8e-06 55.8 294 22.4
A06p03710 Brassica napus HOM05D004246 ORTHO05D005035 8.9e-06 55.5 226 24.3
SGA_v2.0_scaffold90G27668 Striga asiatica HOM05D004246 ORTHO05D005035 8.9e-06 55.5 296 21.6


User provided reference genes

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