Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2812 Cannabis sativa HOM05D007887 ORTHO05D009725 1.1e-44 183.0 93 100.0
Prupe.6G095800 Prunus persica HOM05D007887 ORTHO05D009725 4.0e-15 84.7 101 52.5
MD11G1131400 Malus domestica HOM05D007887 ORTHO05D009725 2.0e-14 82.4 105 53.3
Manes.11G141900 Manihot esculenta HOM05D007887 ORTHO05D009725 4.4e-14 81.3 79 57.0
MD03G1112500 Malus domestica HOM05D007887 ORTHO05D009725 1.3e-13 79.7 103 53.4
RcHm_v2.0_Chr5g0060411 Rosa chinensis HOM05D007887 ORTHO05D009725 1.7e-13 79.3 100 51.0
FvH4_3g33040 Fragaria vesca HOM05D007887 ORTHO05D009725 2.9e-13 78.6 99 49.5
TAR633G0435 Trochodendron aralioides HOM05D007887 ORTHO05D009725 4.9e-13 77.8 94 52.1
Thecc.09G259300 Theobroma cacao HOM05D007887 ORTHO05D009725 6.4e-13 77.4 100 48.0
Cfa011356 Carpinus fangiana HOM05D007887 ORTHO05D009725 8.4e-13 77.0 100 50.0
CSS0013187 Camellia sinensis var. sinensis HOM05D007887 ORTHO05D009725 1.1e-12 76.6 97 50.5
FAN11G2401 Fragaria x ananassa HOM05D007887 ORTHO05D009725 1.9e-12 75.9 99 48.5
Manes.04G024800 Manihot esculenta HOM05D007887 ORTHO05D009725 1.9e-12 75.9 103 52.4
FAN16G3357 Fragaria x ananassa HOM05D007887 ORTHO05D009725 2.4e-12 75.5 101 48.5
CSS0010599 Camellia sinensis var. sinensis HOM05D007887 ORTHO05D009725 3.2e-12 75.1 97 50.5
Haze_23901 Corylus avellana HOM05D007887 ORTHO05D009725 7.1e-12 73.9 99 47.5
CiPaw.13G108000 Carya illinoinensis HOM05D007887 ORTHO05D009725 9.3e-12 73.6 101 51.5
GSVIVG01025148001 Vitis vinifera HOM05D007887 ORTHO05D009725 1.2e-11 73.2 95 51.6
FAN25G1511 Fragaria x ananassa HOM05D007887 ORTHO05D009725 1.6e-11 72.8 100 48.0
Aqoxy1G00528 Aquilegia oxysepala HOM05D007887 ORTHO05D009725 1.7e-10 69.3 101 46.5
Ciclev10029602m.g Citrus clementina HOM05D007887 ORTHO05D009725 5.6e-09 64.3 43 69.8
Actinidia24082 Actinidia chinensis HOM05D007887 ORTHO05D009725 1.3e-08 63.2 44 65.9
HanXRQChr13g0404441 Helianthus annuus HOM05D007887 ORTHO05D009725 2.1e-08 62.4 48 60.4
Phvul.011G072900 Phaseolus vulgaris HOM05D007887 ORTHO05D009725 2.1e-08 62.4 83 42.2
Glyma.11G153796 Glycine max HOM05D007887 ORTHO05D009725 4.8e-08 61.2 85 42.4
Medtr4g060620 Medicago truncatula HOM05D007887 ORTHO05D009725 6.2e-08 60.8 97 40.2
arahy.Tifrunner.gnm1.ann1.ZKT7Q5 Arachis hypogaea HOM05D007887 ORTHO05D009725 8.1e-08 60.5 45 60.0
Glyma.12G071500 Glycine max HOM05D007887 ORTHO05D009725 1.4e-07 59.7 61 47.5
arahy.Tifrunner.gnm1.ann1.QG78WL Arachis hypogaea HOM05D007887 ORTHO05D009725 2.4e-07 58.9 45 57.8
Aa31LG1G12450 Aethionema arabicum HOM05D007887 ORTHO05D009725 3.1e-07 58.5 45 60.0
arahy.Tifrunner.gnm1.ann1.5EA918 Arachis hypogaea HOM05D007887 ORTHO05D009725 3.1e-07 58.5 45 57.8
arahy.Tifrunner.gnm1.ann1.VU6S4B Arachis hypogaea HOM05D007887 ORTHO05D009725 3.1e-07 58.5 45 60.0
Hma1.2p1_0071F.1_g038090 Hydrangea macrophylla HOM05D007887 ORTHO05D009725 3.1e-07 58.5 90 48.9
TPR.G36408 Trifolium pratense HOM05D007887 ORTHO05D009725 6.9e-07 57.4 98 45.9
Gohir.A13G220700 Gossypium hirsutum HOM05D037992 ORTHO05D009725 9.0e-07 57.0 94 39.4
Sp6g21990 Schrenkiella parvula HOM05D007887 ORTHO05D009725 9.0e-07 57.0 56 51.8
Psat7g222640 Pisum sativum HOM05D007887 ORTHO05D009725 1.2e-06 56.6 77 42.9
Eucgr.J00947 Eucalyptus grandis HOM05D007887 ORTHO05D009725 1.5e-06 56.2 53 52.8
AL8G37010 Arabidopsis lyrata HOM05D007887 ORTHO05D009725 2.6e-06 55.5 51 51.0
Lalb_Chr03g0027141 Lupinus albus HOM05D007887 ORTHO05D009725 3.4e-06 55.1 57 49.1
AT5G60400 Arabidopsis thaliana HOM05D007887 ORTHO05D009725 4.4e-06 54.7 72 44.4
BraA03t10429Z Brassica rapa HOM05D007887 ORTHO05D009725 5.8e-06 54.3 91 40.7
Thhalv10015113m.g Eutrema salsugineum HOM05D007887 ORTHO05D009725 7.6e-06 53.9 57 47.4
Lj3g0000190 Lotus japonicus HOM05D007887 ORTHO05D009725 7.6e-06 53.9 66 47.0
BcaC03g13976 Brassica carinata HOM05D007887 ORTHO05D009725 9.9e-06 53.5 97 40.2
C02p11720 Brassica napus HOM05D007887 ORTHO05D009725 9.9e-06 53.5 98 42.9
C03p12840 Brassica napus HOM05D007887 ORTHO05D009725 9.9e-06 53.5 92 41.3
BolC2t07269H Brassica oleracea HOM05D007887 ORTHO05D009725 9.9e-06 53.5 97 40.2
BolC3t13748H Brassica oleracea HOM05D007887 ORTHO05D009725 9.9e-06 53.5 92 41.3
BraA02t05730Z Brassica rapa HOM05D007887 ORTHO05D009725 9.9e-06 53.5 98 42.9


User provided reference genes

Program Settings