Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2787 Cannabis sativa HOM05D000003 ORTHO05D000167 9.7e-74 280.0 139 100.0
CANSAT54G3056 Cannabis sativa HOM05D000003 ORTHO05D000167 6.4e-41 171.0 136 61.8
CANSAT01G0185 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-40 169.9 136 60.3
CANSAT54G1564 Cannabis sativa HOM05D000003 ORTHO05D000167 5.4e-40 167.9 133 57.9
CANSAT01G1078 Cannabis sativa HOM05D000003 ORTHO05D000004 4.6e-39 164.9 133 58.6
CANSAT54G2882 Cannabis sativa HOM05D000003 ORTHO05D000004 7.8e-39 164.1 133 56.4
CANSAT54G1704 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-38 163.3 133 59.4
CANSAT25G0547 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-38 162.9 134 59.7
CANSAT21G1041 Cannabis sativa HOM05D000003 ORTHO05D000004 3.0e-38 162.2 133 56.4
CANSAT25G0754 Cannabis sativa HOM05D000003 ORTHO05D000004 3.0e-38 162.2 136 58.8
CANSAT21G2325 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-37 158.7 133 57.1
CANSAT54G1879 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-34 149.8 121 60.3
CANSAT78G0787 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-34 149.8 131 57.3
CANSAT80G2424 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-27 126.7 104 60.6
CANSAT35G0158 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-27 125.9 90 62.2
CANSAT64G2061 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-25 120.2 100 55.0
CANSAT11G1079 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-21 106.3 86 55.8
CANSAT35G0288 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-17 93.2 130 38.5
CANSAT64G1529 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-17 92.8 130 38.5
CANSAT80G2229 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-16 89.4 132 34.8
CANSAT11G0106 Cannabis sativa HOM05D000003 ORTHO05D000167 4.2e-16 88.6 95 43.2
CANSAT64G1660 Cannabis sativa HOM05D000003 ORTHO05D000004 7.1e-16 87.8 125 38.4
CANSAT54G2709 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-15 86.3 132 34.8
CANSAT35G1518 Cannabis sativa HOM05D000003 ORTHO05D000004 6.0e-15 84.7 127 37.8
CANSAT01G0512 Cannabis sativa HOM05D000003 ORTHO05D000167 3.9e-14 82.0 127 34.6
CANSAT56G2910 Cannabis sativa HOM05D000003 ORTHO05D000167 3.9e-14 82.0 130 33.8
CANSAT64G1779 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-13 80.1 130 35.4
CANSAT64G1471 Cannabis sativa HOM05D000003 ORTHO05D000167 1.9e-13 79.7 128 32.8
CANSAT80G0283 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-13 79.7 127 39.4
CANSAT21G1936 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-13 78.2 130 31.5
CANSAT37G0018 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-12 76.6 130 33.1
CANSAT21G0265 Cannabis sativa HOM05D000003 ORTHO05D000167 4.8e-12 75.1 127 32.3
CANSAT35G1823 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-11 73.6 127 30.7
CANSAT25G1265 Cannabis sativa HOM05D000003 ORTHO05D000167 3.1e-11 72.4 130 30.8
CANSAT64G2575 Cannabis sativa HOM05D000003 ORTHO05D000004 4.0e-11 72.0 127 32.3
CANSAT56G0865 Cannabis sativa HOM05D000003 ORTHO05D000167 6.9e-11 71.2 130 34.6
CANSAT11G0632 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-10 70.5 130 33.1
CANSAT25G1542 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-10 70.5 130 33.1
CANSAT25G1682 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-10 70.1 125 32.0
CANSAT01G1919 Cannabis sativa HOM05D000003 ORTHO05D000167 4.4e-10 68.6 127 33.1
CANSAT25G3224 Cannabis sativa HOM05D000003 ORTHO05D000167 4.4e-10 68.6 128 30.5
CANSAT25G0454 Cannabis sativa HOM05D000003 ORTHO05D000167 7.6e-10 67.8 127 30.7
CANSAT80G2262 Cannabis sativa HOM05D000003 ORTHO05D000167 9.9e-10 67.4 120 31.7
CANSAT35G0410 Cannabis sativa HOM05D000003 ORTHO05D000167 1.3e-09 67.0 125 31.2
CANSAT56G3043 Cannabis sativa HOM05D000003 ORTHO05D000167 1.3e-09 67.0 127 32.3
RcHm_v2.0_Chr2g0147661 Rosa chinensis HOM05D000003 ORTHO05D010713 2.2e-09 66.2 123 29.3
CANSAT35G1852 Cannabis sativa HOM05D000003 ORTHO05D000004 3.8e-09 65.5 122 31.1
CANSAT21G0988 Cannabis sativa HOM05D000003 ORTHO05D000004 4.9e-09 65.1 128 29.7
CANSAT35G1206 Cannabis sativa HOM05D000003 ORTHO05D000167 4.9e-09 65.1 128 29.7
CANSAT80G1457 Cannabis sativa HOM05D000003 ORTHO05D000167 4.9e-09 65.1 127 31.5
CANSAT54G1158 Cannabis sativa HOM05D000003 ORTHO05D000167 6.4e-09 64.7 91 37.4
CANSAT64G0231 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-08 63.9 128 29.7
CANSAT80G2272 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-08 63.9 85 38.8
CANSAT78G0786 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-08 63.5 130 31.5
CANSAT21G0849 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-08 62.8 127 27.6
CANSAT56G0050 Cannabis sativa HOM05D000031 ORTHO05D000030 4.2e-08 62.0 129 28.7
RcHm_v2.0_Chr7g0236061 Rosa chinensis HOM05D000003 ORTHO05D000004 5.4e-08 61.6 123 30.9
CANSAT01G1430 Cannabis sativa HOM05D000003 ORTHO05D000167 9.3e-08 60.8 128 27.3
CANSAT25G3483 Cannabis sativa HOM05D000003 ORTHO05D000167 9.3e-08 60.8 130 30.0
CANSAT25G1269 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-07 60.5 96 36.5
CANSAT56G3747 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-07 60.1 130 30.8
Atru.chr13.1861 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-07 59.7 127 29.1
CANSAT56G0342 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-07 59.7 131 27.5
CANSAT80G1228 Cannabis sativa HOM05D000003 ORTHO05D000167 4.6e-07 58.5 130 29.2
CANSAT78G1435 Cannabis sativa HOM05D000003 ORTHO05D000004 6.0e-07 58.2 130 28.5
CANSAT21G1369 Cannabis sativa HOM05D000003 ORTHO05D000004 7.9e-07 57.8 130 27.7
CANSAT11G0084 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-06 57.4 80 36.2
CANSAT80G1791 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-06 57.4 130 30.8
RcHm_v2.0_Chr4g0415961 Rosa chinensis HOM05D000003 ORTHO05D000167 1.0e-06 57.4 119 28.6
Atru.chr2.1599 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-06 56.6 127 29.9
FAN01G2727 Fragaria x ananassa HOM05D000003 ORTHO05D011454 1.7e-06 56.6 115 29.6
Gorai.005G199400 Gossypium raimondii HOM05D008766 ORTHO05D010886 1.7e-06 56.6 122 29.5
Nitab4.5_0000340g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.7e-06 56.6 107 34.6
CANSAT64G1882 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-06 55.8 127 26.8
CANSAT80G1428 Cannabis sativa HOM05D000003 ORTHO05D000167 3.9e-06 55.5 125 28.0
CANSAT21G2476 Cannabis sativa HOM05D000003 ORTHO05D000004 5.1e-06 55.1 113 28.3
CANSAT25G0663 Cannabis sativa HOM05D000003 ORTHO05D000167 5.1e-06 55.1 133 28.6
CANSAT54G2214 Cannabis sativa HOM05D000003 ORTHO05D000167 5.1e-06 55.1 128 26.6
BolC4t23673H Brassica oleracea HOM05D001239 ORTHO05D000925 6.6e-06 54.7 129 27.1
CANSAT56G1552 Cannabis sativa HOM05D000003 ORTHO05D000004 6.6e-06 54.7 128 26.6
CANSAT64G2594 Cannabis sativa HOM05D000003 ORTHO05D000167 6.6e-06 54.7 116 31.0
Gorai.007G179900 Gossypium raimondii HOM05D008766 ORTHO05D010886 6.6e-06 54.7 129 24.0
Atru.chr3.1273 Acer truncatum HOM05D000003 ORTHO05D000167 8.7e-06 54.3 119 27.7


User provided reference genes

Program Settings