Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2662 Cannabis sativa HOM05D001890 ORTHO05D003442 1.7e-102 375.9 180 100.0
CANSAT64G0653 Cannabis sativa HOM05D001890 ORTHO05D003442 2.0e-87 325.9 158 98.7
Cfa020085 Carpinus fangiana HOM05D001890 ORTHO05D003442 7.7e-63 244.2 158 71.5
MD14G1042900 Malus domestica HOM05D001890 ORTHO05D003442 4.6e-60 235.0 158 67.7
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 6.7e-59 231.1 158 70.3
FvH4_6g20770 Fragaria vesca HOM05D001890 ORTHO05D003442 1.5e-58 229.9 158 69.6
FAN14G1848 Fragaria x ananassa HOM05D001890 ORTHO05D003442 1.5e-58 229.9 158 69.6
MD12G1043900 Malus domestica HOM05D001890 ORTHO05D003442 2.6e-58 229.2 158 65.8
QL07p026881 Quercus lobata HOM05D001890 ORTHO05D003442 5.7e-58 228.0 158 67.7
RcHm_v2.0_Chr3g0476671 Rosa chinensis HOM05D001890 ORTHO05D003442 5.7e-58 228.0 158 70.3
Prupe.7G091200 Prunus persica HOM05D001890 ORTHO05D003442 2.2e-57 226.1 158 67.1
CiPaw.10G019600 Carya illinoinensis HOM05D001890 ORTHO05D003442 3.1e-56 222.2 158 65.8
Ciclev10011250m.g Citrus clementina HOM05D001890 ORTHO05D003442 2.2e-54 216.1 158 65.2
Duzib093G1618 Durio zibethinus HOM05D001890 ORTHO05D003442 2.9e-54 215.7 158 65.8
Lalb_Chr01g0017781 Lupinus albus HOM05D001890 ORTHO05D003442 2.9e-54 215.7 160 61.9
Cpa.g.sc104.3 Carica papaya HOM05D001890 ORTHO05D003442 3.8e-54 215.3 158 64.6
Duzib128G1367 Durio zibethinus HOM05D001890 ORTHO05D003442 8.5e-54 214.2 158 64.6
arahy.Tifrunner.gnm1.ann1.3V0CBS Arachis hypogaea HOM05D001890 ORTHO05D003442 1.1e-53 213.8 156 64.1
ClCG10G018130 Citrullus lanatus HOM05D001890 ORTHO05D003442 1.1e-53 213.8 159 60.4
Thecc.05G108400 Theobroma cacao HOM05D001890 ORTHO05D003442 1.4e-53 213.4 158 63.9
Eucgr.A02559 Eucalyptus grandis HOM05D001890 ORTHO05D003442 4.2e-53 211.8 164 62.8
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 5.5e-53 211.5 158 63.3
Ca_11670_v3 Cicer arietinum L. HOM05D001890 ORTHO05D003442 9.4e-53 210.7 158 61.4
COL.COLO4_29518 Corchorus olitorius HOM05D001890 ORTHO05D003442 1.2e-52 210.3 158 62.0
Gohir.D09G129000 Gossypium hirsutum HOM05D001890 ORTHO05D003442 1.2e-52 210.3 158 64.6
Gorai.006G147700 Gossypium raimondii HOM05D001890 ORTHO05D003442 1.2e-52 210.3 158 64.6
TAR369G0675 Trochodendron aralioides HOM05D001890 ORTHO05D003442 1.2e-52 210.3 158 62.0
VMungo0720G1360 Vigna mungo HOM05D001890 ORTHO05D003442 1.2e-52 210.3 158 63.3
Gohir.A09G132700 Gossypium hirsutum HOM05D001890 ORTHO05D003442 1.6e-52 209.9 158 64.6
Sed0025654 Sechium edule HOM05D001890 ORTHO05D003442 1.6e-52 209.9 165 59.4
Potri.006G201000 Populus trichocarpa HOM05D001890 ORTHO05D003442 2.1e-52 209.5 158 61.4
GSVIVG01022534001 Vitis vinifera HOM05D001890 ORTHO05D003442 2.1e-52 209.5 158 60.1
CiPaw.09G022800 Carya illinoinensis HOM05D001890 ORTHO05D003442 3.6e-52 208.8 158 61.4
Medtr1g055315 Medicago truncatula HOM05D001890 ORTHO05D003442 3.6e-52 208.8 158 60.8
Psat1g223360 Pisum sativum HOM05D001890 ORTHO05D003442 7.9e-52 207.6 158 59.5
CsaV3_3G038170 Cucumis sativus L. HOM05D001890 ORTHO05D003442 1.8e-51 206.5 159 60.4
Glyma.02G193200 Glycine max HOM05D001890 ORTHO05D003442 1.8e-51 206.5 158 62.0
Phvul.007G266400 Phaseolus vulgaris HOM05D001890 ORTHO05D003442 1.8e-51 206.5 158 62.0
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 1.8e-51 206.5 158 59.5
Potri.016G067000 Populus trichocarpa HOM05D001890 ORTHO05D003442 3.0e-51 205.7 158 60.8
PGR004G2025 Punica granatum HOM05D001890 ORTHO05D003442 3.0e-51 205.7 156 59.6
Gorai.002G153500 Gossypium raimondii HOM05D001890 ORTHO05D003442 2.0e-50 203.0 158 63.9
Lj1g0026398 Lotus japonicus HOM05D001890 ORTHO05D003442 2.0e-50 203.0 158 58.2
Gohir.D01G122600 Gossypium hirsutum HOM05D001890 ORTHO05D003442 2.6e-50 202.6 158 63.9
Actinidia06190 Actinidia chinensis HOM05D001890 ORTHO05D003442 3.3e-50 202.2 153 64.7
arahy.Tifrunner.gnm1.ann1.AQHB6D Arachis hypogaea HOM05D001890 ORTHO05D003442 3.3e-50 202.2 158 61.4
SalBow5G5266 Salvia bowleyana HOM05D001890 ORTHO05D003442 4.4e-50 201.8 158 60.1
Sed0008069 Sechium edule HOM05D001890 ORTHO05D003442 4.4e-50 201.8 159 58.5
Aqoxy1G00604 Aquilegia oxysepala HOM05D001890 ORTHO05D003442 5.7e-50 201.4 156 57.7
Lalb_Chr20g0111261 Lupinus albus HOM05D001890 ORTHO05D003442 5.7e-50 201.4 153 62.1
Lj5g0000561 Lotus japonicus HOM05D001890 ORTHO05D003442 9.7e-50 200.7 158 60.8
Migut.L01851 Erythranthe guttata HOM05D001890 ORTHO05D003442 2.2e-49 199.5 159 61.6
Glyma.10G083700 Glycine max HOM05D001890 ORTHO05D003442 2.2e-49 199.5 158 61.4
Manes.08G036000 Manihot esculenta HOM05D001890 ORTHO05D003442 2.2e-49 199.5 154 63.0
arahy.Tifrunner.gnm1.ann1.M3JRXW Arachis hypogaea HOM05D001890 ORTHO05D003442 2.8e-49 199.1 158 60.1
MBI11_g01309_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D003442 2.8e-49 199.1 158 58.9
Solyc01g006870.4 Solanum lycopersicum HOM05D001890 ORTHO05D003442 6.3e-49 198.0 153 59.5
Sopen01g002860 Solanum pennellii HOM05D001890 ORTHO05D003442 6.3e-49 198.0 153 59.5
Glyma.03G203900 Glycine max HOM05D001890 ORTHO05D003442 1.1e-48 197.2 152 62.5
Hma1.2p1_2851F.1_g329440 Hydrangea macrophylla HOM05D001890 ORTHO05D003442 1.1e-48 197.2 158 57.6
PGSC0003DMG400028231 Solanum tuberosum HOM05D001890 ORTHO05D003442 1.1e-48 197.2 158 59.5
CSS0016780 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D003442 1.4e-48 196.8 158 61.4
SGA_v2.0_scaffold392G50676 Striga asiatica HOM05D001890 ORTHO05D003442 1.4e-48 196.8 154 61.0
FAN09G2041 Fragaria x ananassa HOM05D001890 ORTHO05D003442 1.8e-48 196.4 158 62.7
TWI77G0744 Tripterygium wilfordii HOM05D001890 ORTHO05D003442 1.8e-48 196.4 158 55.1
Hma1.2p1_0969F.1_g242598 Hydrangea macrophylla HOM05D001890 ORTHO05D003442 2.4e-48 196.1 158 57.6
Nitab4.5_0000721g0220 Nicotiana tabacum HOM05D001890 ORTHO05D003442 2.4e-48 196.1 153 59.5
DCAR_013449 Daucus carota HOM05D001890 ORTHO05D003442 3.1e-48 195.7 158 59.5
Nitab4.5_0005218g0020 Nicotiana tabacum HOM05D001890 ORTHO05D003442 3.1e-48 195.7 153 60.1
Hund10836 Selenicereus undatus HOM05D001890 ORTHO05D003442 5.3e-48 194.9 149 62.4
Nitab4.5_0001918g0040 Nicotiana tabacum HOM05D001890 ORTHO05D003442 7.0e-48 194.5 153 59.5
Migut.J00744 Erythranthe guttata HOM05D001890 ORTHO05D003442 1.6e-47 193.4 158 58.2
Glyma.19G201300 Glycine max HOM05D001890 ORTHO05D003442 2.0e-47 193.0 152 60.5
TAR623G0995 Trochodendron aralioides HOM05D001890 ORTHO05D003442 2.6e-47 192.6 158 56.3
Atru.chr8.1303 Acer truncatum HOM05D001890 ORTHO05D003442 3.5e-47 192.2 140 67.1
Psat3g028200 Pisum sativum HOM05D001890 ORTHO05D003442 4.5e-47 191.8 160 59.4
VMungo1383G2242 Vigna mungo HOM05D001890 ORTHO05D003442 4.5e-47 191.8 153 60.1
Cc01_g02980 Coffea canephora HOM05D001890 ORTHO05D003442 5.9e-47 191.4 158 59.5
Solyc10g081770.3 Solanum lycopersicum HOM05D001890 ORTHO05D003442 2.2e-46 189.5 153 58.2
Cc06_g06840 Coffea canephora HOM05D001890 ORTHO05D003442 2.9e-46 189.1 158 60.1
ECA233G4742 Erigeron canadensis HOM05D001890 ORTHO05D003442 2.9e-46 189.1 156 56.4
Oeu020167.1 Olea europaea HOM05D001890 ORTHO05D003442 2.9e-46 189.1 159 59.1
Sopen10g032280 Solanum pennellii HOM05D001890 ORTHO05D003442 2.9e-46 189.1 153 58.2
THA.LOC104816629 Tarenaya hassleriana HOM05D001890 ORTHO05D003442 5.0e-46 188.3 164 54.3
CAN.G674.15 Capsicum annuum HOM05D001890 ORTHO05D003442 6.5e-46 188.0 153 56.2
Phvul.001G197400 Phaseolus vulgaris HOM05D001890 ORTHO05D003442 8.5e-46 187.6 152 58.6
vmacro09092 Vaccinium macrocarpon HOM05D001890 ORTHO05D003442 8.5e-46 187.6 140 66.4
Medtr7g106640 Medicago truncatula HOM05D001890 ORTHO05D003442 1.5e-45 186.8 157 58.6
Aa31LG3G5200 Aethionema arabicum HOM05D001890 ORTHO05D003442 1.9e-45 186.4 158 51.9
Cc01_g03030 Coffea canephora HOM05D001890 ORTHO05D003442 4.2e-45 185.3 152 59.2
HanXRQChr13g0398661 Helianthus annuus HOM05D001890 ORTHO05D003442 4.2e-45 185.3 156 54.5
CDE04G0663 Ceratophyllum demersum HOM05D001890 ORTHO05D003442 5.5e-45 184.9 158 55.7
Sc07g0006350 Simmondsia chinensis HOM05D001890 ORTHO05D003442 7.2e-45 184.5 158 57.6
TPR.G25807 Trifolium pratense HOM05D001890 ORTHO05D003442 9.4e-45 184.1 159 55.3
Ca_09069_v3 Cicer arietinum L. HOM05D001890 ORTHO05D003442 1.6e-44 183.3 160 57.5
Nn2g14393 Nelumbo nucifera HOM05D001890 ORTHO05D003442 2.1e-44 183.0 158 52.5
THA.LOC104826799 Tarenaya hassleriana HOM05D001890 ORTHO05D003442 2.1e-44 183.0 160 53.8
EL10Ac5g11825 Beta vulgaris HOM05D001890 ORTHO05D003442 1.4e-43 180.3 160 57.5
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 3.0e-43 179.1 156 55.8
AUR62036337 Chenopodium quinoa HOM05D001890 ORTHO05D003442 3.0e-43 179.1 152 59.9
Lsat_1_v5_gn_6_34701 Lactuca sativa HOM05D001890 ORTHO05D003442 4.0e-43 178.7 153 57.5
Dinv11882 Davidia involucrata HOM05D001890 ORTHO05D003442 5.2e-43 178.3 140 62.1
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 6.7e-43 177.9 156 55.1
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 6.7e-43 177.9 156 55.1
AUR62030696 Chenopodium quinoa HOM05D001890 ORTHO05D003442 6.7e-43 177.9 152 59.9
HanXRQChr02g0053331 Helianthus annuus HOM05D001890 ORTHO05D003442 6.7e-43 177.9 155 52.9
Os11g0568700 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D003442 6.7e-43 177.9 160 53.1
PSO339G5959 Papaver somniferum HOM05D001890 ORTHO05D003442 6.7e-43 177.9 158 51.9
Nn6g34599 Nelumbo nucifera HOM05D001890 ORTHO05D003442 8.8e-43 177.6 158 53.2
HPP92_005860 Vanilla planifolia HOM05D001890 ORTHO05D003442 1.2e-42 177.2 158 51.9
A03p02730 Brassica napus HOM05D001890 ORTHO05D003442 3.3e-42 175.6 156 53.2
Ah.12g059450 Amaranthus hybridus HOM05D001890 ORTHO05D003442 4.4e-42 175.3 151 57.6
A03p37250 Brassica napus HOM05D001890 ORTHO05D003442 5.7e-42 174.9 158 50.0
BraA03t12885Z Brassica rapa HOM05D001890 ORTHO05D003442 5.7e-42 174.9 158 50.0
PSO384G4950 Papaver somniferum HOM05D001890 ORTHO05D003442 7.5e-42 174.5 158 50.6
CARHR206750 Cardamine hirsuta HOM05D001890 ORTHO05D003442 1.3e-41 173.7 173 50.3
Sp3g09950 Schrenkiella parvula HOM05D001890 ORTHO05D003442 1.3e-41 173.7 158 49.4
BraA03t09636Z Brassica rapa HOM05D001890 ORTHO05D003442 2.8e-41 172.6 156 52.6
ATR0697G280 Amborella trichopoda HOM05D001890 ORTHO05D003442 4.8e-41 171.8 150 52.7
C03p45110 Brassica napus HOM05D001890 ORTHO05D003442 4.8e-41 171.8 167 48.5
BolC3t16775H Brassica oleracea HOM05D001890 ORTHO05D003442 4.8e-41 171.8 167 48.5
Sp6g36420 Schrenkiella parvula HOM05D001890 ORTHO05D003442 4.8e-41 171.8 159 52.8
Thhalv10013326m.g Eutrema salsugineum HOM05D001890 ORTHO05D003442 8.2e-41 171.0 159 50.9
BcaB06g25587 Brassica carinata HOM05D001890 ORTHO05D003442 1.1e-40 170.6 159 49.7
Nitab4.5_0009788g0020 Nicotiana tabacum HOM05D001890 ORTHO05D003442 1.1e-40 170.6 135 60.7
BcaB04g18657 Brassica carinata HOM05D001890 ORTHO05D003442 1.8e-40 169.9 159 49.1
Sed0014759 Sechium edule HOM05D001890 ORTHO05D003442 1.8e-40 169.9 160 52.5
Actinidia07949 Actinidia chinensis HOM05D001890 ORTHO05D003442 5.3e-40 168.3 122 66.4
BcaC01g04089 Brassica carinata HOM05D001890 ORTHO05D003442 5.3e-40 168.3 158 50.0
AL6G16530 Arabidopsis lyrata HOM05D001890 ORTHO05D003442 7.0e-40 167.9 158 51.3
BcaC06g32575 Brassica carinata HOM05D001890 ORTHO05D003442 1.2e-39 167.2 158 49.4
Thhalv10020420m.g Eutrema salsugineum HOM05D001890 ORTHO05D003442 1.6e-39 166.8 159 47.2
A05p37600 Brassica napus HOM05D001890 ORTHO05D003442 4.5e-39 165.2 152 50.7
BraA05t22558Z Brassica rapa HOM05D001890 ORTHO05D003442 1.0e-38 164.1 152 50.0
BolC9t59781H Brassica oleracea HOM05D001890 ORTHO05D003442 1.3e-38 163.7 158 48.1
Carub.0006s0532 Capsella rubella HOM05D001890 ORTHO05D003442 1.3e-38 163.7 156 50.6
PSO063G3472 Papaver somniferum HOM05D001890 ORTHO05D003442 1.7e-38 163.3 158 46.8
A10p29950 Brassica napus HOM05D001890 ORTHO05D003442 2.2e-38 162.9 158 48.7
BraA10t45034Z Brassica rapa HOM05D001890 ORTHO05D003442 2.2e-38 162.9 158 48.7
CARHR086270 Cardamine hirsuta HOM05D001890 ORTHO05D003442 2.9e-38 162.5 159 45.3
AL3G23280 Arabidopsis lyrata HOM05D001890 ORTHO05D003442 8.5e-38 161.0 160 43.8
BcaC06g32374 Brassica carinata HOM05D001890 ORTHO05D003442 1.5e-37 160.2 158 46.8
C09p70360 Brassica napus HOM05D001890 ORTHO05D003442 1.5e-37 160.2 158 46.8
Peaxi162Scf00675g00056 Petunia axillaris HOM05D001890 ORTHO05D003442 2.5e-37 159.5 165 50.3
Rhsim02G0181100 Rhododendron simsii HOM05D001890 ORTHO05D003442 2.5e-37 159.5 127 62.2
Carub.0003s1106 Capsella rubella HOM05D001890 ORTHO05D003442 1.2e-36 157.1 158 44.3
Peaxi162Scf00203g00101 Petunia axillaris HOM05D001890 ORTHO05D003442 1.6e-36 156.8 134 56.0
BcaC05g29335 Brassica carinata HOM05D001890 ORTHO05D003442 2.7e-36 156.0 152 48.7
BolC5t34281H Brassica oleracea HOM05D001890 ORTHO05D003442 2.7e-36 156.0 152 48.7
C05p56160 Brassica napus HOM05D001890 ORTHO05D003442 8.0e-36 154.5 152 48.0
Sabra06G0154700 Salix brachista HOM05D001890 ORTHO05D003442 8.0e-36 154.5 199 44.2
PSO384G4065 Papaver somniferum HOM05D001890 ORTHO05D003442 5.2e-35 151.8 160 46.2
PSO339G3824 Papaver somniferum HOM05D001890 ORTHO05D003442 1.2e-34 150.6 160 45.6
arahy.Tifrunner.gnm1.ann1.JU9MFG Arachis hypogaea HOM05D001890 ORTHO05D003442 2.6e-34 149.4 126 59.5
Haze_20107 Corylus avellana HOM05D001890 ORTHO05D003442 4.8e-33 145.2 158 50.6
MELO3C009560.2 Cucumis melo HOM05D001890 ORTHO05D003442 6.3e-33 144.8 159 49.1
Sabra16G0068300 Salix brachista HOM05D001890 ORTHO05D003442 6.3e-33 144.8 125 58.4
CAN.G911.29 Capsicum annuum HOM05D001890 ORTHO05D003442 4.1e-32 142.1 153 47.1
Aqoxy2G00642 Aquilegia oxysepala HOM05D001890 ORTHO05D003442 7.0e-32 141.4 154 47.4
PSO339G0680 Papaver somniferum HOM05D001890 ORTHO05D003442 3.5e-31 139.0 125 51.2
unitig_746.g26781 Utricularia gibba HOM05D001890 ORTHO05D003442 5.0e-30 135.2 117 51.3
SEGI_19574 Sequoiadendron giganteum HOM05D001890 ORTHO05D003442 8.6e-30 134.4 109 52.3
Lj1A1058T56 Lonicera japonica HOM05D001890 ORTHO05D003442 1.1e-29 134.0 90 62.2
Gohir.A01G135400 Gossypium hirsutum HOM05D001890 ORTHO05D003442 3.6e-28 129.0 68 77.9
SGA_v2.0_scaffold31G12814 Striga asiatica HOM05D001890 ORTHO05D003442 8.0e-28 127.9 126 51.6
Aa31sc52G260 Aethionema arabicum HOM05D001890 ORTHO05D003442 5.7e-26 121.7 136 49.3
Manes.09G043100 Manihot esculenta HOM05D001890 ORTHO05D003442 1.7e-25 120.2 69 68.1
PSO063G7439 Papaver somniferum HOM05D001890 ORTHO05D003442 2.8e-25 119.4 71 63.4
SMO356G0493 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 4.1e-24 115.5 148 39.9
Psat6g097960 Pisum sativum HOM05D001890 ORTHO05D003442 5.0e-22 108.6 58 70.7
AT5G06440 Arabidopsis thaliana HOM05D001890 ORTHO05D003442 1.1e-21 107.5 69 62.3
Mapoly0007s0117 Marchantia polymorpha HOM05D001890 ORTHO05D003442 1.5e-21 107.1 157 40.1
HanXRQChr05g0138051 Helianthus annuus HOM05D001890 ORTHO05D003442 2.1e-20 103.2 118 47.5
PSO384G0895 Papaver somniferum HOM05D001890 ORTHO05D003442 2.6e-18 96.3 51 68.6
Pp3c15_23860 Physcomitrium patens HOM05D001890 ORTHO05D003442 2.6e-18 96.3 79 48.1
AT3G11720 Arabidopsis thaliana HOM05D001890 ORTHO05D003442 4.1e-16 89.0 58 55.2
Pp3c9_24430 Physcomitrium patens HOM05D001890 ORTHO05D003442 2.3e-14 83.2 58 51.7
AagrBONN_evm.TU.Sc2ySwM_362.1054 Anthoceros agrestis HOM05D001890 ORTHO05D003442 2.8e-12 76.3 52 53.8
arahy.Tifrunner.gnm1.ann1.AF4ETX Arachis hypogaea HOM05D001890 ORTHO05D003442 1.2e-10 70.9 71 53.5
SHI28305 Sapria himalayana HOM05D001890 ORTHO05D003442 4.4e-10 68.9 37 73.0
TPR.G7023 Trifolium pratense HOM05D001890 ORTHO05D003442 6.4e-09 65.1 36 69.4


User provided reference genes

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