Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2629 Cannabis sativa HOM05D007325 ORTHO05D009251 1.0e-62 243.4 139 100.0
Prupe.6G302100 Prunus persica HOM05D007325 ORTHO05D009251 5.4e-24 114.8 143 53.1
MD12G1197000 Malus domestica HOM05D007325 ORTHO05D009251 6.0e-23 111.3 125 52.8
RcHm_v2.0_Chr3g0459051 Rosa chinensis HOM05D007325 ORTHO05D009251 4.3e-21 105.1 87 66.7
TPR.G3077 Trifolium pratense HOM05D007325 ORTHO05D009251 9.6e-21 104.0 106 58.5
Lj5g0004840 Lotus japonicus HOM05D007325 ORTHO05D009251 1.6e-20 103.2 129 52.7
Phvul.001G220700 Phaseolus vulgaris HOM05D007325 ORTHO05D009251 3.6e-20 102.1 126 54.0
VMungo1383G0662 Vigna mungo HOM05D007325 ORTHO05D009251 6.2e-20 101.3 140 48.6
MD04G1183600 Malus domestica HOM05D007325 ORTHO05D009251 2.4e-19 99.4 142 45.8
Psat6g156800 Pisum sativum HOM05D007325 ORTHO05D009251 4.0e-19 98.6 101 57.4
Glyma.03G226900 Glycine max HOM05D007325 ORTHO05D009251 8.9e-19 97.4 91 61.5
Lalb_Chr21g0309941 Lupinus albus HOM05D007325 ORTHO05D009251 8.9e-19 97.4 124 51.6
FAN09G1210 Fragaria x ananassa HOM05D007325 ORTHO05D009251 2.0e-18 96.3 126 53.2
Lalb_Chr02g0147341 Lupinus albus HOM05D007325 ORTHO05D009251 5.8e-18 94.7 124 50.8
Cfa004401 Carpinus fangiana HOM05D008494 ORTHO05D010021 9.9e-18 94.0 130 49.2
arahy.Tifrunner.gnm1.ann1.Y42B53 Arachis hypogaea HOM05D007325 ORTHO05D009251 1.7e-17 93.2 84 61.9
Dinv24533 Davidia involucrata HOM05D003267 ORTHO05D003955 2.2e-17 92.8 90 57.8
Thecc.05G331600 Theobroma cacao HOM05D007325 ORTHO05D009251 2.9e-17 92.4 91 58.2
Lalb_Chr04g0260261 Lupinus albus HOM05D007325 ORTHO05D009251 3.8e-17 92.0 112 54.5
Medtr1g085240 Medicago truncatula HOM05D007325 ORTHO05D009251 3.8e-17 92.0 97 57.7
Atru.chr12.1499 Acer truncatum HOM05D007325 ORTHO05D009251 6.4e-17 91.3 110 55.5
Manes.08G105900 Manihot esculenta HOM05D007325 ORTHO05D009251 6.4e-17 91.3 92 58.7
Thhalv10022316m.g Eutrema salsugineum HOM05D007325 ORTHO05D009251 1.4e-16 90.1 140 41.4
PGSC0003DMG400018232 Solanum tuberosum HOM05D007325 ORTHO05D009251 1.4e-16 90.1 90 58.9
Ciclev10030031m.g Citrus clementina HOM05D007325 ORTHO05D009251 1.9e-16 89.7 76 67.1
FAN02G3982 Fragaria x ananassa HOM05D007325 ORTHO05D009251 7.1e-16 87.8 131 48.1
FAN05G0265 Fragaria x ananassa HOM05D007325 ORTHO05D009251 7.1e-16 87.8 131 48.1
FAN05G4266 Fragaria x ananassa HOM05D007325 ORTHO05D009251 7.1e-16 87.8 131 48.1
Lj5P313T22 Lonicera japonica HOM05D007325 ORTHO05D009251 1.2e-15 87.0 92 55.4
Sp3g04850 Schrenkiella parvula HOM05D007325 ORTHO05D009251 2.1e-15 86.3 93 52.7
Potri.005G000700 Populus trichocarpa HOM05D007325 ORTHO05D009251 2.7e-15 85.9 136 43.4
Sopen01g044880 Solanum pennellii HOM05D007325 ORTHO05D009251 2.7e-15 85.9 90 54.4
Gohir.D13G117300 Gossypium hirsutum HOM05D007325 ORTHO05D009251 3.5e-15 85.5 90 54.4
Gohir.A13G114400 Gossypium hirsutum HOM05D007325 ORTHO05D009251 4.6e-15 85.1 90 54.4
THA.LOC104822290 Tarenaya hassleriana HOM05D007325 ORTHO05D009251 4.6e-15 85.1 68 61.8
Glyma.20G089800 Glycine max HOM05D007325 ORTHO05D009251 7.8e-15 84.3 115 45.2
Manes.09G182800 Manihot esculenta HOM05D007325 ORTHO05D009251 7.8e-15 84.3 92 54.3
FvH4_6g08790 Fragaria vesca HOM05D007325 ORTHO05D009251 1.0e-14 84.0 129 46.5
Glyma.19G223800 Glycine max HOM05D007325 ORTHO05D009251 1.0e-14 84.0 72 65.3
Lj1g0016832 Lotus japonicus HOM05D007325 ORTHO05D009251 1.7e-14 83.2 105 51.4
Phvul.007G207000 Phaseolus vulgaris HOM05D007325 ORTHO05D009251 2.3e-14 82.8 62 69.4
Lalb_Chr06g0167201 Lupinus albus HOM05D007325 ORTHO05D009251 3.0e-14 82.4 87 51.7
Cc02_g36910 Coffea canephora HOM05D007325 ORTHO05D009251 3.9e-14 82.0 96 52.1
Gorai.013G131900 Gossypium raimondii HOM05D007325 ORTHO05D009251 3.9e-14 82.0 90 53.3
BcaC01g04310 Brassica carinata HOM05D007325 ORTHO05D009251 1.1e-13 80.5 88 53.4
C03p41860 Brassica napus HOM05D007325 ORTHO05D009251 1.1e-13 80.5 88 53.4
BolC3t16469H Brassica oleracea HOM05D007325 ORTHO05D009251 1.1e-13 80.5 88 53.4
QL03p011419 Quercus lobata HOM05D007325 ORTHO05D009251 1.5e-13 80.1 97 53.6
VMungo0720G0176 Vigna mungo HOM05D003267 ORTHO05D003955 2.5e-13 79.3 62 66.1
ATR0693G152 Amborella trichopoda HOM05D007325 ORTHO05D009251 3.3e-13 79.0 66 63.6
Eucgr.H01350 Eucalyptus grandis HOM05D007325 ORTHO05D009251 4.3e-13 78.6 91 52.7
Carub.0003s0533 Capsella rubella HOM05D007325 ORTHO05D009251 9.6e-13 77.4 93 49.5
Oeu061920.1 Olea europaea HOM05D007325 ORTHO05D009251 1.6e-12 76.6 95 47.4
arahy.Tifrunner.gnm1.ann1.GPC6YY Arachis hypogaea HOM05D007325 ORTHO05D009251 2.1e-12 76.3 93 53.8
Lalb_Chr15g0077801 Lupinus albus HOM05D007325 ORTHO05D009251 2.1e-12 76.3 93 49.5
BraA03t12615Z Brassica rapa HOM05D007325 ORTHO05D009251 2.8e-12 75.9 88 52.3
Dinv30961 Davidia involucrata HOM05D007325 ORTHO05D009251 2.8e-12 75.9 90 52.2
FAN14G5110 Fragaria x ananassa HOM05D007325 ORTHO05D009251 3.6e-12 75.5 97 51.5
HanXRQChr04g0108581 Helianthus annuus HOM05D007325 ORTHO05D009251 3.6e-12 75.5 91 49.5
BcaC05g30077 Brassica carinata HOM05D007325 ORTHO05D009251 4.8e-12 75.1 88 51.1
C05p61330 Brassica napus HOM05D007325 ORTHO05D009251 4.8e-12 75.1 88 51.1
BolC5t34792H Brassica oleracea HOM05D007325 ORTHO05D009251 4.8e-12 75.1 88 51.1
Potri.005G000401 Populus trichocarpa HOM05D007325 ORTHO05D009251 4.8e-12 75.1 111 45.9
CARHR080420 Cardamine hirsuta HOM05D007325 ORTHO05D009251 8.1e-12 74.3 93 48.4
Glyma.10G141100 Glycine max HOM05D007325 ORTHO05D009251 8.1e-12 74.3 60 63.3
PGR119G2017 Punica granatum HOM05D007325 ORTHO05D009251 8.1e-12 74.3 71 63.4
AL3G16720 Arabidopsis lyrata HOM05D007325 ORTHO05D009251 1.4e-11 73.6 88 51.1
TAR365G0322 Trochodendron aralioides HOM05D007325 ORTHO05D009251 1.4e-11 73.6 68 61.8
Aa31LG5G16370 Aethionema arabicum HOM05D007325 ORTHO05D009251 2.4e-11 72.8 117 41.9
CSS0011097 Camellia sinensis var. sinensis HOM05D007325 ORTHO05D009251 3.1e-11 72.4 74 58.1
Carub.0006s2420 Capsella rubella HOM05D007325 ORTHO05D009251 3.1e-11 72.4 69 58.0
A05p42120 Brassica napus HOM05D007325 ORTHO05D009251 4.0e-11 72.0 88 51.1
BraA05t22930Z Brassica rapa HOM05D007325 ORTHO05D009251 5.3e-11 71.6 69 59.4
A03p34390 Brassica napus HOM05D007325 ORTHO05D009251 9.0e-11 70.9 88 50.0
Medtr7g111180 Medicago truncatula HOM05D007325 ORTHO05D009251 9.0e-11 70.9 66 59.1
Lj9P239T47 Lonicera japonica HOM05D007325 ORTHO05D009251 1.2e-10 70.5 72 56.9
BcaB04g19232 Brassica carinata HOM05D007325 ORTHO05D009251 1.5e-10 70.1 86 50.0
Medtr7g111170 Medicago truncatula HOM05D007325 ORTHO05D009251 4.4e-10 68.6 66 57.6
Aa31LG11G10030 Aethionema arabicum HOM05D007325 ORTHO05D009251 1.3e-09 67.0 85 48.2
MBI18_g03881_MAGBIO Magnolia biondii HOM05D007325 ORTHO05D009251 4.9e-09 65.1 58 55.2
Migut.B00680 Erythranthe guttata HOM05D007325 ORTHO05D009251 6.4e-09 64.7 92 44.6
MBI18_g28938_MAGBIO Magnolia biondii HOM05D007325 ORTHO05D009251 6.4e-09 64.7 68 54.4
Lsat_1_v5_gn_9_83741 Lactuca sativa HOM05D007325 ORTHO05D009251 8.4e-09 64.3 70 48.6
Psat0s4029g0040 Pisum sativum HOM05D007325 ORTHO05D009251 1.1e-08 63.9 66 54.5
Eucgr.B01357 Eucalyptus grandis HOM05D007325 ORTHO05D009251 1.4e-08 63.5 109 45.9
TAR365G1009 Trochodendron aralioides HOM05D007325 ORTHO05D009251 1.4e-08 63.5 72 52.8
TWI14G0425 Tripterygium wilfordii HOM05D007325 ORTHO05D009251 2.4e-08 62.8 72 58.3
Thhalv10005170m.g Eutrema salsugineum HOM05D007325 ORTHO05D009251 5.4e-08 61.6 68 50.0
PGR031G0924 Punica granatum HOM05D007325 ORTHO05D009251 5.4e-08 61.6 77 51.9
AT5G26731 Arabidopsis thaliana HOM05D007325 ORTHO05D009251 7.1e-08 61.2 68 51.5
BcaNung02823 Brassica carinata HOM05D007325 ORTHO05D009251 1.6e-07 60.1 85 43.5
C07p41670 Brassica napus HOM05D007325 ORTHO05D009251 1.6e-07 60.1 85 43.5
BolC7t44702H Brassica oleracea HOM05D007325 ORTHO05D009251 1.6e-07 60.1 85 43.5
A06p36820 Brassica napus HOM05D007325 ORTHO05D009251 2.7e-07 59.3 85 42.4
Sp2g21390 Schrenkiella parvula HOM05D007325 ORTHO05D009251 2.7e-07 59.3 84 44.0
SGA_v2.0_scaffold131G34452 Striga asiatica HOM05D007325 ORTHO05D009251 4.6e-07 58.5 77 46.8
BraA06t26608Z Brassica rapa HOM05D007325 ORTHO05D009251 6.0e-07 58.2 85 41.2
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 7.9e-07 57.8 47 57.4
AL6G38400 Arabidopsis lyrata HOM05D007325 ORTHO05D009251 1.3e-06 57.0 68 48.5
SalBow6G6911 Salvia bowleyana HOM05D007325 ORTHO05D009251 1.3e-06 57.0 85 43.5
TPR.G8391 Trifolium pratense HOM05D007325 ORTHO05D009251 1.3e-06 57.0 98 44.9
C09p06380 Brassica napus HOM05D007325 ORTHO05D009251 1.7e-06 56.6 85 41.2
Sed0022272 Sechium edule HOM05D007325 ORTHO05D009251 2.3e-06 56.2 69 49.3
BolC9t53557H Brassica oleracea HOM05D007325 ORTHO05D009251 5.1e-06 55.1 85 40.0
CARHR186980 Cardamine hirsuta HOM05D007325 ORTHO05D009251 5.1e-06 55.1 67 49.3
Oeu006910.1 Olea europaea HOM05D007325 ORTHO05D009251 6.6e-06 54.7 82 42.7
BcaC04g23624 Brassica carinata HOM05D007325 ORTHO05D009251 8.7e-06 54.3 85 40.0


User provided reference genes

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