Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 3.1e-75 285.0 143 100.0
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 5.5e-48 194.5 146 69.2
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 6.1e-47 191.0 151 69.5
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 3.4e-45 185.3 146 69.2
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 1.8e-43 179.5 143 63.6
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 5.4e-43 177.9 160 61.2
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 7.0e-43 177.6 155 61.3
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 9.1e-43 177.2 161 61.5
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 9.1e-43 177.2 110 76.4
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 2.0e-42 176.0 145 66.9
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 2.0e-42 176.0 147 66.7
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 3.5e-42 175.3 109 77.1
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 4.5e-42 174.9 143 64.3
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 5.9e-42 174.5 152 65.8
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 5.9e-42 174.5 140 64.3
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 7.7e-42 174.1 144 64.6
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 7.7e-42 174.1 155 61.3
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 1.0e-41 173.7 109 75.2
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 1.3e-41 173.3 125 70.4
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 2.3e-41 172.6 142 63.4
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 2.3e-41 172.6 146 63.7
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 2.9e-41 172.2 125 71.2
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 3.8e-41 171.8 101 80.2
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 6.5e-41 171.0 149 62.4
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 8.6e-41 170.6 147 61.9
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 8.6e-41 170.6 151 65.6
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 1.1e-40 170.2 101 79.2
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 1.1e-40 170.2 104 77.9
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 1.1e-40 170.2 143 62.2
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 1.5e-40 169.9 108 70.4
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 1.9e-40 169.5 97 81.4
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 1.9e-40 169.5 145 63.4
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 3.3e-40 168.7 151 64.2
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 3.3e-40 168.7 101 81.2
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 3.3e-40 168.7 125 69.6
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 4.2e-40 168.3 98 82.7
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 4.2e-40 168.3 147 63.9
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 4.2e-40 168.3 151 62.9
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 7.2e-40 167.5 107 75.7
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 9.5e-40 167.2 150 61.3
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 9.5e-40 167.2 147 63.3
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 1.6e-39 166.4 107 74.8
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 2.1e-39 166.0 117 68.4
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 2.1e-39 166.0 151 62.3
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 2.8e-39 165.6 145 60.7
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 3.6e-39 165.2 108 69.4
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 4.7e-39 164.9 143 62.2
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 4.7e-39 164.9 108 72.2
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 6.1e-39 164.5 128 64.1
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 6.1e-39 164.5 146 63.7
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 8.0e-39 164.1 98 76.5
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 8.0e-39 164.1 98 76.5
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 1.4e-38 163.3 146 61.0
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 8.9e-38 160.6 103 74.8
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 8.9e-38 160.6 109 74.3
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 3.4e-37 158.7 158 54.4
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 4.4e-37 158.3 153 58.8
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 4.4e-37 158.3 95 78.9
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 7.5e-37 157.5 134 58.2
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 1.7e-36 156.4 109 67.9
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 1.7e-36 156.4 133 59.4
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 1.7e-36 156.4 133 59.4
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 1.7e-36 156.4 141 58.2
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 1.7e-36 156.4 109 66.1
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 2.8e-36 155.6 98 79.6
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 3.7e-36 155.2 107 69.2
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 3.7e-36 155.2 118 67.8
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 4.9e-36 154.8 115 64.3
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 4.9e-36 154.8 104 72.1
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 6.3e-36 154.5 115 64.3
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 1.1e-35 153.7 118 66.1
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 1.8e-35 152.9 125 61.6
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 3.1e-35 152.1 114 63.2
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 3.1e-35 152.1 107 69.2
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 4.1e-35 151.8 117 65.0
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 5.4e-35 151.4 116 64.7
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 7.0e-35 151.0 141 53.2
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 2.0e-34 149.4 142 52.1
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 2.0e-34 149.4 107 67.3
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 2.7e-34 149.1 143 51.7
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 1.3e-33 146.7 182 47.8
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 1.7e-33 146.4 155 55.5
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 1.7e-33 146.4 104 67.3
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 2.3e-33 146.0 98 71.4
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 2.3e-33 146.0 97 72.2
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 3.8e-33 145.2 110 63.6
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 5.0e-33 144.8 97 71.1
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 1.1e-32 143.7 98 70.4
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 1.9e-32 142.9 110 62.7
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 2.5e-32 142.5 129 57.4
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 3.3e-32 142.1 119 58.0
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 3.3e-32 142.1 110 61.8
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 4.3e-32 141.7 110 61.8
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 4.3e-32 141.7 110 61.8
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 4.3e-32 141.7 104 64.4
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 5.6e-32 141.4 107 63.6
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 1.2e-31 140.2 168 47.0
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 2.1e-31 139.4 110 59.1
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 2.8e-31 139.0 97 68.0
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 2.8e-31 139.0 104 62.5
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 6.1e-31 137.9 134 54.5
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 4.0e-30 135.2 107 57.9
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 8.9e-30 134.0 151 55.6
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 9.8e-29 130.6 119 62.2
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 1.7e-28 129.8 126 53.2
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 3.5e-26 122.1 195 40.0
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 3.9e-25 118.6 74 77.0
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 1.9e-24 116.3 98 63.3
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 6.8e-22 107.8 61 80.3
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 9.8e-21 104.0 104 50.0
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 9.8e-21 104.0 112 56.2
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 1.3e-20 103.6 126 45.2
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 2.2e-20 102.8 55 89.1
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 2.4e-19 99.4 54 87.0
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 7.0e-19 97.8 108 43.5
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 1.3e-17 93.6 95 45.3
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 1.6e-15 86.7 96 44.8
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 1.1e-14 84.0 98 55.1
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 8.3e-12 74.3 95 42.1
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 1.4e-11 73.6 42 76.2
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 2.8e-07 59.3 96 34.4
MBI13_g38674_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 3.6e-07 58.9 103 39.8


User provided reference genes

Program Settings