Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2612 Cannabis sativa HOM05D001069 ORTHO05D007586 1.5e-63 246.1 133 100.0
Thecc.05G281200 Theobroma cacao HOM05D001069 ORTHO05D007586 2.8e-54 215.3 128 89.1
Lalb_Chr21g0311011 Lupinus albus HOM05D001069 ORTHO05D007586 6.3e-54 214.2 125 88.8
VMungo0720G0790 Vigna mungo HOM05D001069 ORTHO05D007586 1.1e-53 213.4 125 89.6
Duzib128G0644 Durio zibethinus HOM05D001069 ORTHO05D007586 1.4e-53 213.0 128 87.5
RcHm_v2.0_Chr3g0450701 Rosa chinensis HOM05D001069 ORTHO05D007586 1.4e-53 213.0 125 87.2
COL.COLO4_15368 Corchorus olitorius HOM05D001069 ORTHO05D007586 3.1e-53 211.8 124 87.9
FAN09G0270 Fragaria x ananassa HOM05D001069 ORTHO05D007586 3.1e-53 211.8 125 88.0
MSTRG.20449 Avicennia marina HOM05D001069 ORTHO05D007586 4.1e-53 211.5 128 85.9
FvH4_6g02700 Fragaria vesca HOM05D001069 ORTHO05D007586 4.1e-53 211.5 125 87.2
FAN14G5212 Fragaria x ananassa HOM05D001069 ORTHO05D007586 4.1e-53 211.5 125 87.2
Medtr1g080770 Medicago truncatula HOM05D001069 ORTHO05D007586 4.1e-53 211.5 125 88.0
Psat6g145040 Pisum sativum HOM05D001069 ORTHO05D007586 4.1e-53 211.5 125 87.2
Lalb_Chr06g0168091 Lupinus albus HOM05D001069 ORTHO05D007586 5.3e-53 211.1 125 88.0
Manes.09G151800 Manihot esculenta HOM05D001069 ORTHO05D007586 5.3e-53 211.1 125 87.2
arahy.Tifrunner.gnm1.ann1.SY74BB Arachis hypogaea HOM05D001069 ORTHO05D007586 6.9e-53 210.7 125 87.2
Prupe.6G344500 Prunus persica HOM05D001069 ORTHO05D007586 6.9e-53 210.7 125 87.2
CSS0013670 Camellia sinensis var. sinensis HOM05D001069 ORTHO05D007586 9.1e-53 210.3 125 86.4
CSS0018717 Camellia sinensis var. sinensis HOM05D001069 ORTHO05D007586 9.1e-53 210.3 125 86.4
FAN02G3324 Fragaria x ananassa HOM05D001069 ORTHO05D007586 9.1e-53 210.3 125 88.0
FAN05G3732 Fragaria x ananassa HOM05D001069 ORTHO05D007586 9.1e-53 210.3 125 87.2
Glyma.20G225500 Glycine max HOM05D001069 ORTHO05D007586 9.1e-53 210.3 125 87.2
Oeu002656.1 Olea europaea HOM05D001069 ORTHO05D007586 9.1e-53 210.3 128 85.2
Haze_04370 Corylus avellana HOM05D001069 ORTHO05D007586 1.2e-52 209.9 125 86.4
FAN14G1639 Fragaria x ananassa HOM05D001069 ORTHO05D007586 1.5e-52 209.5 125 86.4
FAN14G4385 Fragaria x ananassa HOM05D001069 ORTHO05D007586 1.5e-52 209.5 125 86.4
Gohir.D13G107700 Gossypium hirsutum HOM05D001069 ORTHO05D007586 1.5e-52 209.5 128 86.7
Gorai.013G120600 Gossypium raimondii HOM05D001069 ORTHO05D007586 1.5e-52 209.5 124 87.1
MD12G1242900 Malus domestica HOM05D001069 ORTHO05D007586 1.5e-52 209.5 125 88.0
Lj5g0026442 Lotus japonicus HOM05D001069 ORTHO05D007586 2.0e-52 209.1 127 85.0
TPR.G12907 Trifolium pratense HOM05D001069 ORTHO05D007586 2.0e-52 209.1 125 86.4
Duzib177G1121 Durio zibethinus HOM05D001069 ORTHO05D007586 2.6e-52 208.8 128 86.7
Potri.005G054500 Populus trichocarpa HOM05D001069 ORTHO05D007586 2.6e-52 208.8 125 87.2
Cfa006409 Carpinus fangiana HOM05D001069 ORTHO05D001549 3.4e-52 208.4 123 87.0
CiPaw.08G122900 Carya illinoinensis HOM05D001069 ORTHO05D007586 3.4e-52 208.4 125 85.6
Glyma.10G162900 Glycine max HOM05D001069 ORTHO05D007586 3.4e-52 208.4 125 87.2
Gohir.A13G104300 Gossypium hirsutum HOM05D001069 ORTHO05D007586 3.4e-52 208.4 128 85.9
MD04G1225700 Malus domestica HOM05D001069 ORTHO05D007586 3.4e-52 208.4 125 87.2
Manes.08G135700 Manihot esculenta HOM05D001069 ORTHO05D007586 3.4e-52 208.4 125 87.2
GSVIVG01036275001 Vitis vinifera HOM05D001069 ORTHO05D007586 3.4e-52 208.4 125 85.6
arahy.Tifrunner.gnm1.ann1.AYUH3A Arachis hypogaea HOM05D001069 ORTHO05D007586 4.5e-52 208.0 125 85.6
Eucgr.H04324 Eucalyptus grandis HOM05D001069 ORTHO05D007586 4.5e-52 208.0 125 84.8
Phvul.007G187900 Phaseolus vulgaris HOM05D001069 ORTHO05D007586 4.5e-52 208.0 125 87.2
Potri.013G042100 Populus trichocarpa HOM05D001069 ORTHO05D007586 5.9e-52 207.6 125 85.6
QL03p027238 Quercus lobata HOM05D001069 ORTHO05D007586 7.7e-52 207.2 124 86.3
Nn1g02583 Nelumbo nucifera HOM05D001069 ORTHO05D007586 1.0e-51 206.8 125 84.0
SGA_v2.0_scaffold5G02970 Striga asiatica HOM05D001069 ORTHO05D007586 1.0e-51 206.8 128 83.6
CiPaw.07G068400 Carya illinoinensis HOM05D001069 ORTHO05D007586 1.3e-51 206.5 125 84.8
Rhsim07G0074100 Rhododendron simsii HOM05D001069 ORTHO05D007586 1.3e-51 206.5 125 85.6
Actinidia32808 Actinidia chinensis HOM05D001069 ORTHO05D007586 1.7e-51 206.1 125 84.8
PGR004G2600 Punica granatum HOM05D001069 ORTHO05D007586 1.7e-51 206.1 125 85.6
TAR636G2667 Trochodendron aralioides HOM05D001069 ORTHO05D001549 2.9e-51 205.3 125 83.2
Atru.chr2.835 Acer truncatum HOM05D001069 ORTHO05D007586 5.0e-51 204.5 128 82.8
Peaxi162Scf00282g00417 Petunia axillaris HOM05D001069 ORTHO05D007586 5.0e-51 204.5 128 82.0
BcaB07g34137 Brassica carinata HOM05D001069 ORTHO05D007586 8.5e-51 203.8 129 82.2
Ca_10042_v3 Cicer arietinum L. HOM05D001069 ORTHO05D007586 8.5e-51 203.8 123 85.4
Cc02_g30720 Coffea canephora HOM05D001069 ORTHO05D007586 1.1e-50 203.4 128 83.6
CAN.G134.94 Capsicum annuum HOM05D001069 ORTHO05D007586 2.5e-50 202.2 124 83.9
Nitab4.5_0008996g0040 Nicotiana tabacum HOM05D001069 ORTHO05D007586 2.5e-50 202.2 128 81.2
PSO210G4375 Papaver somniferum HOM05D001069 ORTHO05D007586 2.5e-50 202.2 127 82.7
ECA233G1896 Erigeron canadensis HOM05D000316 ORTHO05D000374 3.2e-50 201.8 127 82.7
Nitab4.5_0001592g0010 Nicotiana tabacum HOM05D001069 ORTHO05D007586 3.2e-50 201.8 133 78.9
A06p05680 Brassica napus HOM05D001069 ORTHO05D007586 4.2e-50 201.4 129 80.6
THA.LOC104823751 Tarenaya hassleriana HOM05D001069 ORTHO05D007586 4.2e-50 201.4 125 83.2
C05p06850 Brassica napus HOM05D001069 ORTHO05D007586 9.4e-50 200.3 129 81.4
PSO832G3124 Papaver somniferum HOM05D001069 ORTHO05D007586 9.4e-50 200.3 127 81.9
CARHR008700 Cardamine hirsuta HOM05D001069 ORTHO05D007586 2.1e-49 199.1 130 80.8
DCAR_006651 Daucus carota HOM05D001069 ORTHO05D007586 2.1e-49 199.1 128 83.6
Migut.B01094 Erythranthe guttata HOM05D001069 ORTHO05D007586 2.1e-49 199.1 128 80.5
Sabra05G0047400 Salix brachista HOM05D001069 ORTHO05D001549 2.7e-49 198.7 131 80.9
TWI12G0612 Tripterygium wilfordii HOM05D001069 ORTHO05D007586 4.7e-49 198.0 125 81.6
Aqoxy2G00949 Aquilegia oxysepala HOM05D001069 ORTHO05D007586 6.1e-49 197.6 127 77.2
MELO3C004390.2 Cucumis melo HOM05D001069 ORTHO05D007586 6.1e-49 197.6 125 80.0
Nn3g19512 Nelumbo nucifera HOM05D001069 ORTHO05D007586 6.1e-49 197.6 125 80.0
Dinv20292 Davidia involucrata HOM05D001069 ORTHO05D007586 7.9e-49 197.2 125 80.8
Os03g0628900 Oryza sativa ssp. japonica HOM05D001069 ORTHO05D007586 7.9e-49 197.2 125 78.4
Sc09g0003960 Simmondsia chinensis HOM05D001069 ORTHO05D007586 7.9e-49 197.2 125 81.6
THA.LOC104805822 Tarenaya hassleriana HOM05D001069 ORTHO05D007586 1.0e-48 196.8 125 81.6
unitig_52.g17389 Utricularia gibba HOM05D001069 ORTHO05D007586 1.4e-48 196.4 124 81.5
HanXRQChr16g0514711 Helianthus annuus HOM05D001069 ORTHO05D007586 3.0e-48 195.3 127 79.5
ClCG02G016730 Citrullus lanatus HOM05D001069 ORTHO05D007586 3.9e-48 194.9 123 79.7
Ciclev10029576m.g Citrus clementina HOM05D001069 ORTHO05D007586 1.1e-47 193.4 128 78.1
Hund22103 Selenicereus undatus HOM05D001069 ORTHO05D007586 2.0e-47 192.6 122 80.3
AL1G19210 Arabidopsis lyrata HOM05D001069 ORTHO05D007586 2.6e-47 192.2 129 76.7
AT1G08780 Arabidopsis thaliana HOM05D001069 ORTHO05D007586 2.6e-47 192.2 129 76.7
Sed0025346 Sechium edule HOM05D001069 ORTHO05D007586 2.6e-47 192.2 125 76.8
EL10Ac4g09163 Beta vulgaris HOM05D001069 ORTHO05D007586 3.3e-47 191.8 125 80.0
Sp1g07420 Schrenkiella parvula HOM05D001069 ORTHO05D007586 3.3e-47 191.8 130 77.7
A08p34980 Brassica napus HOM05D001069 ORTHO05D007586 4.4e-47 191.4 129 76.0
BcaC07g38446 Brassica carinata HOM05D001069 ORTHO05D007586 5.7e-47 191.0 130 75.4
C08p12160 Brassica napus HOM05D001069 ORTHO05D007586 5.7e-47 191.0 130 75.4
BraA08t35409Z Brassica rapa HOM05D001069 ORTHO05D007586 5.7e-47 191.0 129 76.0
Thhalv10009095m.g Eutrema salsugineum HOM05D001069 ORTHO05D007586 5.7e-47 191.0 130 76.9
BolC5t29444H Brassica oleracea HOM05D001069 ORTHO05D007586 7.4e-47 190.7 119 82.4
BcaNung06267 Brassica carinata HOM05D001069 ORTHO05D007586 9.7e-47 190.3 130 74.6
Carub.0001s0812 Capsella rubella HOM05D001069 ORTHO05D007586 1.3e-46 189.9 119 82.4
BraA06t23778Z Brassica rapa HOM05D001069 ORTHO05D007586 1.7e-46 189.5 119 81.5
AUR62004967 Chenopodium quinoa HOM05D001069 ORTHO05D007586 1.7e-46 189.5 125 80.0
AUR62000994 Chenopodium quinoa HOM05D001069 ORTHO05D007586 2.2e-46 189.1 125 79.2
CDE06G2591 Ceratophyllum demersum HOM05D001069 ORTHO05D007586 2.8e-46 188.7 125 76.8
Aa31sc20G40 Aethionema arabicum HOM05D001069 ORTHO05D007586 1.1e-45 186.8 127 77.2
Sed0020567 Sechium edule HOM05D001069 ORTHO05D007586 4.1e-45 184.9 125 74.4
CsaV3_2G004010 Cucumis sativus L. HOM05D001069 ORTHO05D007586 4.5e-44 181.4 125 74.4
PGSC0003DMG401019457 Solanum tuberosum HOM05D001069 ORTHO05D007586 1.1e-42 176.8 128 74.2
BolC8t48854H Brassica oleracea HOM05D001069 ORTHO05D007586 1.9e-42 176.0 154 63.0
ATR0665G433 Amborella trichopoda HOM05D001069 ORTHO05D007586 3.6e-41 171.8 125 68.8
HanXRQChr17g0559331 Helianthus annuus HOM05D001069 ORTHO05D007586 4.7e-41 171.4 125 73.6
MBI04_g44868_MAGBIO Magnolia biondii HOM05D001069 ORTHO05D007586 1.4e-40 169.9 125 72.0
Zm00001eb051110 Zea mays HOM05D001069 ORTHO05D007586 1.4e-40 169.9 125 70.4
Solyc01g097300.4 Solanum lycopersicum HOM05D001069 ORTHO05D007586 1.8e-40 169.5 128 71.9
Sopen01g040970 Solanum pennellii HOM05D001069 ORTHO05D007586 1.8e-40 169.5 128 71.9
CDE07G0518 Ceratophyllum demersum HOM05D001069 ORTHO05D007586 8.8e-40 167.2 125 70.4
Zm00001eb218870 Zea mays HOM05D001069 ORTHO05D007586 4.4e-39 164.9 128 69.5
SGA_v2.0_scaffold24G10675 Striga asiatica HOM05D004194 ORTHO05D005641 2.2e-38 162.5 153 62.1
HPP92_026288 Vanilla planifolia HOM05D001069 ORTHO05D007586 6.3e-38 161.0 125 67.2
Sabra13G0038700 Salix brachista HOM05D001069 ORTHO05D007586 4.7e-33 144.8 88 86.4
arahy.Tifrunner.gnm1.ann1.VQ2WN5 Arachis hypogaea HOM05D001069 ORTHO05D007586 1.4e-32 143.3 84 85.7
Pp3c16_6640 Physcomitrium patens HOM05D001069 ORTHO05D007586 1.8e-32 142.9 125 61.6
CBR_g8595 Chara braunii HOM05D001069 ORTHO05D007586 5.2e-32 141.4 122 59.8
AagrBONN_evm.TU.Sc2ySwM_369.398 Anthoceros agrestis HOM05D001069 ORTHO05D007586 1.5e-31 139.8 128 60.2
Mapoly0094s0008 Marchantia polymorpha HOM05D001069 ORTHO05D007586 5.7e-31 137.9 125 59.2
vmacro13808 Vaccinium macrocarpon HOM05D001069 ORTHO05D007586 7.5e-31 137.5 87 81.6
Lsat_1_v5_gn_5_68360 Lactuca sativa HOM05D001069 ORTHO05D007586 4.8e-30 134.8 87 79.3
SHI18420 Sapria himalayana HOM05D001069 ORTHO05D007586 1.7e-27 126.3 87 73.6
SMO356G0364 Selaginella moellendorffii HOM05D001069 ORTHO05D007586 3.2e-26 122.1 133 52.6
MCO16G237 Micromonas commoda HOM05D001069 ORTHO05D007586 3.7e-22 108.6 120 48.3
PRCOL_00003582 Prasinoderma coloniale HOM05D001069 ORTHO05D007586 2.1e-17 92.8 121 44.6
Cre16.g671750 Chlamydomonas reinhardtii HOM05D001069 ORTHO05D007586 1.0e-16 90.5 121 43.8
TAR365G0807 Trochodendron aralioides HOM05D001069 ORTHO05D007586 2.3e-16 89.4 61 72.1
arahy.Tifrunner.gnm1.ann1.X5I3PL Arachis hypogaea HOM05D001069 ORTHO05D007586 1.1e-13 80.5 46 89.1
arahy.Tifrunner.gnm1.ann1.JAH3YR Arachis hypogaea HOM05D001069 ORTHO05D007586 1.1e-10 70.5 38 89.5
arahy.Tifrunner.gnm1.ann1.VDJK8S Arachis hypogaea HOM05D001069 ORTHO05D007586 1.1e-10 70.5 50 72.0
Sabra13G0038600 Salix brachista HOM05D000002 ORTHO05D000001 1.9e-10 69.7 38 89.5
TAR633G2811 Trochodendron aralioides HOM05D001069 ORTHO05D007586 2.1e-09 66.2 32 96.9
SHI18422 Sapria himalayana HOM05D001069 ORTHO05D007586 2.3e-08 62.8 41 73.2


User provided reference genes

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