Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2607 Cannabis sativa HOM05D029669 ORTHO05D010823 3.6e-123 444.9 219 100.0
CANSAT35G0470 Cannabis sativa HOM05D029669 ORTHO05D010823 5.4e-119 431.0 214 99.1
CANSAT56G3357 Cannabis sativa HOM05D029669 ORTHO05D010823 4.6e-70 268.5 139 95.7
CANSAT25G2344 Cannabis sativa HOM05D029669 ORTHO05D010823 1.4e-58 230.3 118 98.3
CANSAT21G2496 Cannabis sativa HOM05D009769 ORTHO05D010823 2.7e-38 162.9 207 43.5
CANSAT78G0023 Cannabis sativa HOM05D009769 ORTHO05D010823 1.4e-18 97.4 71 57.7
Nn3g19299 Nelumbo nucifera HOM05D007651 ORTHO05D000898 9.2e-10 68.2 210 27.6
Atru.chr3.1743 Acer truncatum HOM05D008396 ORTHO05D000898 1.2e-09 67.8 103 33.0
Atru.chr5.2180 Acer truncatum HOM05D004096 ORTHO05D000898 1.2e-09 67.8 212 23.6
Atru.chr10.1446 Acer truncatum HOM05D004096 ORTHO05D000898 1.0e-08 64.7 103 31.1
Ciclev10033783m.g Citrus clementina HOM05D008396 ORTHO05D000898 1.7e-08 63.9 91 33.0
CANSAT64G0341 Cannabis sativa HOM05D009769 ORTHO05D010823 1.1e-07 61.2 135 34.1
Dinv08235 Davidia involucrata HOM05D008396 ORTHO05D000898 1.1e-07 61.2 99 31.3
Atru.chr11.572 Acer truncatum HOM05D007651 ORTHO05D000898 1.5e-07 60.8 106 29.2
Dinv15468 Davidia involucrata HOM05D008396 ORTHO05D000898 1.5e-07 60.8 65 36.9
Ciclev10021259m.g Citrus clementina HOM05D008396 ORTHO05D000898 1.9e-07 60.5 218 24.3
Atru.chr3.3033 Acer truncatum HOM05D007651 ORTHO05D000898 3.3e-07 59.7 103 29.1
Dinv12671 Davidia involucrata HOM05D008396 ORTHO05D000898 7.3e-07 58.5 65 36.9
FvH4_2g09911 Fragaria vesca HOM05D004096 ORTHO05D000898 9.5e-07 58.2 88 28.4
FAN24G1944 Fragaria x ananassa HOM05D004096 ORTHO05D000898 9.5e-07 58.2 88 28.4
Rhsim04G0115000 Rhododendron simsii HOM05D007651 ORTHO05D000898 1.2e-06 57.8 101 27.7
QL03p022565 Quercus lobata HOM05D007651 ORTHO05D000898 1.6e-06 57.4 162 24.7
CANSAT78G0590 Cannabis sativa HOM05D009769 ORTHO05D000898 2.1e-06 57.0 25 100.0
Prupe.5G238300 Prunus persica HOM05D004096 ORTHO05D000898 2.1e-06 57.0 203 30.5
RcHm_v2.0_Chr6g0266671 Rosa chinensis HOM05D004096 ORTHO05D000898 2.1e-06 57.0 88 28.4
Ciclev10002333m.g Citrus clementina HOM05D008396 ORTHO05D000898 2.8e-06 56.6 218 23.9
FAN20G1880 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.6e-06 56.2 88 28.4
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 3.6e-06 56.2 211 26.1
Dinv08228 Davidia involucrata HOM05D008396 ORTHO05D000898 4.7e-06 55.8 85 32.9
Dinv36340 Davidia involucrata HOM05D008396 ORTHO05D000898 4.7e-06 55.8 82 34.1
QL04p089735 Quercus lobata HOM05D022192 ORTHO05D009908 4.7e-06 55.8 163 25.8
Dinv10220 Davidia involucrata HOM05D008396 ORTHO05D000898 6.1e-06 55.5 82 30.5
FAN04G2605 Fragaria x ananassa HOM05D008674 ORTHO05D000898 6.1e-06 55.5 128 33.6
Rhsim02G0102000 Rhododendron simsii HOM05D002347 ORTHO05D000898 6.1e-06 55.5 101 26.7
Rhsim02G0142200 Rhododendron simsii HOM05D007651 ORTHO05D000898 6.1e-06 55.5 101 26.7
Rhsim05G0139900 Rhododendron simsii HOM05D007651 ORTHO05D000898 6.1e-06 55.5 134 25.4
Rhsim09G0109800 Rhododendron simsii HOM05D007651 ORTHO05D000898 6.1e-06 55.5 101 26.7
Dinv35892 Davidia involucrata HOM05D008396 ORTHO05D000898 8.0e-06 55.1 65 38.5
FAN27G1870 Fragaria x ananassa HOM05D004096 ORTHO05D000898 8.0e-06 55.1 84 28.6
Rhsim01G0153500 Rhododendron simsii HOM05D011344 ORTHO05D016379 8.0e-06 55.1 91 27.5


User provided reference genes

Program Settings