Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2578 Cannabis sativa HOM05D004740 ORTHO05D005991 6.0e-217 757.3 404 100.0
TAR623G0659 Trochodendron aralioides HOM05D004740 ORTHO05D005991 4.7e-169 598.2 394 80.7
CSS0045632 Camellia sinensis var. sinensis HOM05D004740 ORTHO05D005991 4.4e-167 591.7 381 82.2
QL01p026440 Quercus lobata HOM05D004740 ORTHO05D005991 4.4e-167 591.7 407 79.9
CiPaw.13G069800 Carya illinoinensis HOM05D004740 ORTHO05D005991 6.3e-166 587.8 388 81.4
Dinv28694 Davidia involucrata HOM05D004740 ORTHO05D005991 1.6e-164 583.2 412 76.7
EL10Ac7g15913 Beta vulgaris HOM05D004740 ORTHO05D005991 6.6e-163 577.8 381 79.8
Sp4g12790 Schrenkiella parvula HOM05D004740 ORTHO05D005991 6.6e-163 577.8 393 79.1
PSO801G0690 Papaver somniferum HOM05D004740 ORTHO05D005991 8.6e-163 577.4 384 78.6
Haze_24407 Corylus avellana HOM05D004740 ORTHO05D005991 1.5e-162 576.6 374 82.1
PSO339G6109 Papaver somniferum HOM05D004740 ORTHO05D005991 1.5e-162 576.6 378 79.9
Sed0001589 Sechium edule HOM05D004740 ORTHO05D005991 1.9e-162 576.2 378 82.0
Peaxi162Scf00055g00057 Petunia axillaris HOM05D004740 ORTHO05D005991 4.3e-162 575.1 369 81.6
Rhsim13G0064700 Rhododendron simsii HOM05D004740 ORTHO05D005991 5.6e-162 574.7 383 80.4
MD11G1056800 Malus domestica HOM05D004740 ORTHO05D005991 7.3e-162 574.3 391 79.8
vmacro02923 Vaccinium macrocarpon HOM05D004740 ORTHO05D005991 9.5e-162 573.9 383 80.4
Duzib168G1324 Durio zibethinus HOM05D004740 ORTHO05D005991 3.6e-161 572.0 389 79.9
COL.COLO4_11143 Corchorus olitorius HOM05D004740 ORTHO05D005991 6.1e-161 571.2 355 85.6
Thecc.09G357100 Theobroma cacao HOM05D004740 ORTHO05D005991 8.0e-161 570.9 388 79.4
Potri.009G077800 Populus trichocarpa HOM05D004740 ORTHO05D005991 1.4e-160 570.1 393 78.4
Gorai.003G150000 Gossypium raimondii HOM05D004740 ORTHO05D005991 1.8e-160 569.7 335 88.1
TWI75G0989 Tripterygium wilfordii HOM05D004740 ORTHO05D005991 1.8e-160 569.7 393 78.1
Nitab4.5_0002737g0070 Nicotiana tabacum HOM05D004740 ORTHO05D005991 2.3e-160 569.3 406 76.4
MELO3C020514.2 Cucumis melo HOM05D004740 ORTHO05D005991 4.0e-160 568.5 399 76.9
Lj2A1092T52 Lonicera japonica HOM05D004740 ORTHO05D005991 4.0e-160 568.5 377 79.3
Thhalv10016751m.g Eutrema salsugineum HOM05D004740 ORTHO05D005991 5.2e-160 568.2 392 79.3
AT2G30200 Arabidopsis thaliana HOM05D004740 ORTHO05D005991 6.8e-160 567.8 389 78.1
CsaV3_1G036540 Cucumis sativus L. HOM05D004740 ORTHO05D005991 6.8e-160 567.8 375 80.5
Nitab4.5_0001121g0110 Nicotiana tabacum HOM05D004740 ORTHO05D005991 6.8e-160 567.8 404 75.5
arahy.Tifrunner.gnm1.ann1.MX8U3M Arachis hypogaea HOM05D004740 ORTHO05D005991 8.9e-160 567.4 405 77.5
arahy.Tifrunner.gnm1.ann1.FJ253B Arachis hypogaea HOM05D004740 ORTHO05D005991 1.5e-159 566.6 405 77.5
BolC3t14364H Brassica oleracea HOM05D004740 ORTHO05D005991 2.0e-159 566.2 391 78.5
Ah.15g096090 Amaranthus hybridus HOM05D004740 ORTHO05D005991 2.6e-159 565.8 379 78.6
MD03G1055800 Malus domestica HOM05D004740 ORTHO05D005991 2.6e-159 565.8 402 77.4
Sc12g0002010 Simmondsia chinensis HOM05D004740 ORTHO05D005991 2.6e-159 565.8 399 75.7
arahy.Tifrunner.gnm1.ann1.T9C115 Arachis hypogaea HOM05D004740 ORTHO05D005991 4.4e-159 565.1 405 77.5
Carub.0004s1135 Capsella rubella HOM05D004740 ORTHO05D005991 4.4e-159 565.1 404 77.2
Gohir.A03G025700 Gossypium hirsutum HOM05D004740 ORTHO05D005991 4.4e-159 565.1 387 80.1
CARHR123500 Cardamine hirsuta HOM05D004740 ORTHO05D005991 5.7e-159 564.7 389 79.4
Sabra09G0059400 Salix brachista HOM05D004740 ORTHO05D005991 7.5e-159 564.3 393 77.6
SalBow2G1640 Salvia bowleyana HOM05D004740 ORTHO05D005991 9.8e-159 563.9 408 74.5
AL4G25030 Arabidopsis lyrata HOM05D004740 ORTHO05D005991 1.7e-158 563.1 381 79.5
Cfa011772 Carpinus fangiana HOM05D004740 ORTHO05D005991 1.7e-158 563.1 385 79.2
RcHm_v2.0_Chr5g0071571 Rosa chinensis HOM05D004740 ORTHO05D005991 2.2e-158 562.8 399 76.7
Gohir.D03G142800 Gossypium hirsutum HOM05D004740 ORTHO05D005991 2.9e-158 562.4 387 79.8
PGR102G2346 Punica granatum HOM05D004740 ORTHO05D005991 2.9e-158 562.4 393 77.6
Prupe.6G048900 Prunus persica HOM05D004740 ORTHO05D005991 4.9e-158 561.6 406 76.1
FvH4_3g39690 Fragaria vesca HOM05D004740 ORTHO05D005991 6.4e-158 561.2 399 76.4
THA.LOC104826277 Tarenaya hassleriana HOM05D004740 ORTHO05D005991 1.4e-157 560.1 376 78.5
ClCG03G000380 Citrullus lanatus HOM05D004740 ORTHO05D005991 1.8e-157 559.7 412 74.8
THA.LOC104800771 Tarenaya hassleriana HOM05D004740 ORTHO05D005991 4.1e-157 558.5 355 82.0
Ciclev10028558m.g Citrus clementina HOM05D004740 ORTHO05D005991 5.4e-157 558.1 414 75.6
Sopen01g002970 Solanum pennellii HOM05D004740 ORTHO05D005991 5.4e-157 558.1 359 81.1
Lj6g0008641 Lotus japonicus HOM05D004740 ORTHO05D005991 7.0e-157 557.8 377 78.0
Solyc01g006980.4 Solanum lycopersicum HOM05D004740 ORTHO05D005991 7.0e-157 557.8 359 80.8
BraA04t17832Z Brassica rapa HOM05D004740 ORTHO05D005991 1.2e-156 557.0 403 74.9
Manes.18G127700 Manihot esculenta HOM05D004740 ORTHO05D005991 1.2e-156 557.0 400 76.5
PGSC0003DMG400021362 Solanum tuberosum HOM05D004740 ORTHO05D005991 1.6e-156 556.6 359 80.8
Migut.N00764 Erythranthe guttata HOM05D004740 ORTHO05D005991 2.7e-156 555.8 404 75.0
MSTRG.17889 Avicennia marina HOM05D004740 ORTHO05D005991 3.5e-156 555.4 410 73.4
Lalb_Chr18g0051371 Lupinus albus HOM05D004740 ORTHO05D005991 3.5e-156 555.4 406 75.6
Aa31LG5G6500 Aethionema arabicum HOM05D004740 ORTHO05D005991 5.9e-156 554.7 398 75.6
Glyma.18G057700 Glycine max HOM05D004740 ORTHO05D005991 5.9e-156 554.7 376 78.5
BolC4t23568H Brassica oleracea HOM05D004740 ORTHO05D005991 1.3e-155 553.5 390 77.7
Aqoxy2G00789 Aquilegia oxysepala HOM05D004740 ORTHO05D005991 5.0e-155 551.6 400 77.0
Nn2g13251 Nelumbo nucifera HOM05D004740 ORTHO05D005991 5.0e-155 551.6 372 80.6
Eucgr.J01859 Eucalyptus grandis HOM05D004740 ORTHO05D005991 6.6e-155 551.2 413 73.1
Hund29009 Selenicereus undatus HOM05D004740 ORTHO05D005991 6.6e-155 551.2 366 78.7
Hund29013 Selenicereus undatus HOM05D004740 ORTHO05D005991 6.6e-155 551.2 366 78.7
BcaC02g11103 Brassica carinata HOM05D004740 ORTHO05D005991 8.6e-155 550.8 390 77.2
A05p15240 Brassica napus HOM05D004740 ORTHO05D005991 8.6e-155 550.8 391 77.2
C04p20390 Brassica napus HOM05D004740 ORTHO05D005991 8.6e-155 550.8 391 77.2
Lalb_Chr15g0083211 Lupinus albus HOM05D004740 ORTHO05D005991 8.6e-155 550.8 377 78.5
SGA_v2.0_scaffold146G36123 Striga asiatica HOM05D004740 ORTHO05D005991 8.6e-155 550.8 378 77.0
BraA05t20443Z Brassica rapa HOM05D004740 ORTHO05D005991 1.1e-154 550.4 391 77.2
FAN21G3316 Fragaria x ananassa HOM05D004740 ORTHO05D005991 1.9e-154 549.7 424 72.2
FAN21G3649 Fragaria x ananassa HOM05D004740 ORTHO05D005991 1.9e-154 549.7 424 72.2
Ca_15002_v3 Cicer arietinum L. HOM05D004740 ORTHO05D005991 2.5e-154 549.3 377 76.4
C04p59110 Brassica napus HOM05D004740 ORTHO05D005991 3.3e-154 548.9 400 74.5
BolC4t27422H Brassica oleracea HOM05D004740 ORTHO05D005991 3.3e-154 548.9 400 74.5
CAN.G911.42 Capsicum annuum HOM05D004740 ORTHO05D005991 5.6e-154 548.1 350 81.1
FAN11G1726 Fragaria x ananassa HOM05D004740 ORTHO05D005991 5.6e-154 548.1 422 72.3
FAN16G0900 Fragaria x ananassa HOM05D004740 ORTHO05D005991 5.6e-154 548.1 422 72.3
BcaC02g08041 Brassica carinata HOM05D004740 ORTHO05D005991 6.2e-153 544.7 400 73.8
Phvul.006G073300 Phaseolus vulgaris HOM05D004740 ORTHO05D005991 1.1e-152 543.9 401 74.6
BcaB06g28350 Brassica carinata HOM05D004740 ORTHO05D005991 1.4e-152 543.5 405 72.8
Medtr3g031380 Medicago truncatula HOM05D004740 ORTHO05D005991 1.4e-152 543.5 400 73.0
HanXRQChr01g0012131 Helianthus annuus HOM05D004740 ORTHO05D005991 1.8e-152 543.1 380 74.7
MBI05_g35601_MAGBIO Magnolia biondii HOM05D004740 ORTHO05D005991 2.3e-152 542.7 385 76.4
AUR62001878 Chenopodium quinoa HOM05D004740 ORTHO05D005991 3.1e-152 542.3 385 75.3
VMungo0540G0639 Vigna mungo HOM05D004740 ORTHO05D005991 4.0e-152 542.0 375 77.3
CDE06G2756 Ceratophyllum demersum HOM05D004740 ORTHO05D005991 5.2e-152 541.6 373 76.4
FAN25G0671 Fragaria x ananassa HOM05D004740 ORTHO05D005991 5.2e-152 541.6 423 70.9
Psat5g153440 Pisum sativum HOM05D004740 ORTHO05D005991 5.2e-152 541.6 399 72.7
Glyma.11G164500 Glycine max HOM05D004740 ORTHO05D005991 1.5e-151 540.0 375 76.0
BcaB02g10307 Brassica carinata HOM05D004740 ORTHO05D005991 2.0e-151 539.7 365 79.5
TAR633G1387 Trochodendron aralioides HOM05D004740 ORTHO05D005991 2.6e-151 539.3 327 85.3
AUR62009675 Chenopodium quinoa HOM05D004740 ORTHO05D005991 2.9e-150 535.8 385 74.0
arahy.Tifrunner.gnm1.ann1.C8ZV0S Arachis hypogaea HOM05D004740 ORTHO05D005991 1.1e-149 533.9 415 73.7
Os03g0297400 Oryza sativa ssp. japonica HOM05D004740 ORTHO05D005991 1.0e-147 527.3 334 80.8
DCAR_018228 Daucus carota HOM05D004740 ORTHO05D005991 1.3e-147 526.9 383 74.4
HPP92_013770 Vanilla planifolia HOM05D004740 ORTHO05D005991 5.0e-147 525.0 347 78.4
unitig_60.g25555 Utricularia gibba HOM05D004740 ORTHO05D005991 7.3e-146 521.2 385 71.7
HanXRQChr01g0012161 Helianthus annuus HOM05D004740 ORTHO05D005991 3.6e-145 518.8 377 73.5
Zm00001eb013760 Zea mays HOM05D004740 ORTHO05D005991 4.7e-145 518.5 326 80.7
ECA248G3413 Erigeron canadensis HOM05D004740 ORTHO05D005991 1.1e-144 517.3 387 71.6
BcaB01g04122 Brassica carinata HOM05D004740 ORTHO05D005991 6.4e-142 508.1 377 75.3
CiPaw.14G054500 Carya illinoinensis HOM05D004740 ORTHO05D005991 2.4e-141 506.1 297 87.9
Actinidia32613 Actinidia chinensis HOM05D004740 ORTHO05D005991 1.2e-140 503.8 380 72.4
Cc01_g14810 Coffea canephora HOM05D004740 ORTHO05D005991 1.2e-140 503.8 297 86.2
TPR.G35611 Trifolium pratense HOM05D004740 ORTHO05D005991 1.6e-140 503.4 297 85.9
BcaC01g06023 Brassica carinata HOM05D004740 ORTHO05D005991 2.1e-140 503.1 379 73.6
Lsat_1_v5_gn_5_174621 Lactuca sativa HOM05D004740 ORTHO05D005991 2.7e-140 502.7 421 66.3
Mapoly0009s0078 Marchantia polymorpha HOM05D004740 ORTHO05D005991 7.3e-138 494.6 327 75.8
ATR0594G208 Amborella trichopoda HOM05D004740 ORTHO05D005991 9.5e-138 494.2 297 85.2
SEGI_23058 Sequoiadendron giganteum HOM05D004740 ORTHO05D005991 6.2e-137 491.5 384 69.3
C03p19860 Brassica napus HOM05D004740 ORTHO05D005991 8.1e-137 491.1 342 78.9
Pp3c20_19160 Physcomitrium patens HOM05D004740 ORTHO05D005991 4.0e-136 488.8 371 69.8
A04p22970 Brassica napus HOM05D004740 ORTHO05D005991 6.4e-134 481.5 353 75.1
Sed0003355 Sechium edule HOM05D004740 ORTHO05D005991 1.7e-131 473.4 313 79.6
Atru.chr3.4126 Acer truncatum HOM05D004740 ORTHO05D005991 2.9e-126 456.1 414 65.7
AagrBONN_evm.TU.Sc2ySwM_228.2654 Anthoceros agrestis HOM05D004740 ORTHO05D005991 2.9e-126 456.1 324 71.3
SMO200G0259 Selaginella moellendorffii HOM05D004740 ORTHO05D005991 9.3e-125 451.1 370 65.4
SHI19203 Sapria himalayana HOM05D004740 ORTHO05D005991 1.7e-123 446.8 422 61.4
Nn2g10995 Nelumbo nucifera HOM05D004740 ORTHO05D005991 1.8e-120 436.8 377 68.2
Cpa.g.sc2.364 Carica papaya HOM05D004740 ORTHO05D005991 1.2e-116 424.1 246 89.8
arahy.Tifrunner.gnm1.ann1.R7F6LC Arachis hypogaea HOM05D004740 ORTHO05D005991 5.1e-115 418.7 272 81.2
Cre14.g621650 Chlamydomonas reinhardtii HOM05D004740 ORTHO05D005991 8.7e-115 417.9 316 69.0
Potri.001G282600 Populus trichocarpa HOM05D004740 ORTHO05D005991 4.8e-113 412.1 348 66.4
PRCOL_00005899 Prasinoderma coloniale HOM05D004740 ORTHO05D005991 6.2e-105 385.2 295 67.8
CBR_g33923 Chara braunii HOM05D004740 ORTHO05D005991 1.8e-104 383.6 333 59.5
MCO01G413 Micromonas commoda HOM05D004740 ORTHO05D005991 3.1e-96 356.3 336 57.4
GSVIVG01024639001 Vitis vinifera HOM05D004740 ORTHO05D005991 1.1e-90 337.8 198 88.4
A03p16880 Brassica napus HOM05D004740 ORTHO05D005991 4.1e-80 302.8 198 80.8
BraA03t10976Z Brassica rapa HOM05D004740 ORTHO05D005991 4.1e-80 302.8 198 80.8
Oeu005355.3 Olea europaea HOM05D003290 ORTHO05D005991 6.3e-73 278.9 166 84.9
Actinidia23202 Actinidia chinensis HOM05D004740 ORTHO05D005991 1.3e-65 254.6 380 46.3
PRCOL_00000466 Prasinoderma coloniale HOM05D004740 ORTHO05D005991 5.9e-63 245.7 295 45.1
MCO04G051 Micromonas commoda HOM05D004740 ORTHO05D005991 2.6e-58 230.3 305 44.3
GSVIVG01024638001 Vitis vinifera HOM05D004740 ORTHO05D005991 5.9e-55 219.2 129 82.9
COL.COLO4_24546 Corchorus olitorius HOM05D004740 ORTHO05D008255 1.9e-53 214.2 201 63.2
Cre02.g088250 Chlamydomonas reinhardtii HOM05D004740 ORTHO05D005991 5.5e-53 212.6 329 40.4
Actinidia02620 Actinidia chinensis HOM05D004740 ORTHO05D005991 6.1e-52 209.1 154 73.4
Nitab4.5_0006359g0020 Nicotiana tabacum HOM05D004740 ORTHO05D005991 1.1e-45 188.3 178 60.1
Nitab4.5_0000644g0120 Nicotiana tabacum HOM05D004740 ORTHO05D005991 9.5e-37 158.7 149 58.4
Nitab4.5_0006126g0030 Nicotiana tabacum HOM05D004740 ORTHO05D005991 1.4e-35 154.8 213 47.4
Oeu025052.1 Olea europaea HOM05D004740 ORTHO05D005991 6.8e-35 152.5 130 64.6
Zm00001eb396720 Zea mays HOM05D004740 ORTHO05D444996 1.5e-29 134.8 80 83.8
HPP92_013838 Vanilla planifolia HOM05D004740 ORTHO05D005991 8.1e-28 129.0 101 65.3
MBI10_g37352_MAGBIO Magnolia biondii HOM05D004740 ORTHO05D241996 7.6e-18 95.9 75 68.0
COL.COLO4_37924 Corchorus olitorius HOM05D004740 ORTHO05D005991 1.7e-14 84.7 59 71.2
Nitab4.5_0000644g0100 Nicotiana tabacum HOM05D004740 ORTHO05D284956 2.3e-14 84.3 48 87.5
HPP92_012003 Vanilla planifolia HOM05D004740 ORTHO05D429499 5.1e-14 83.2 90 53.3
VMungo0331G0938 Vigna mungo HOM05D000577 ORTHO05D001093 3.6e-12 77.0 62 66.1
Carub.0004s1136 Capsella rubella HOM05D004740 ORTHO05D005991 3.4e-10 70.5 42 76.2
MBI15_g35007_MAGBIO Magnolia biondii HOM05D000363 ORTHO05D017376 6.4e-09 66.2 43 74.4
ATR0037G072 Amborella trichopoda HOM05D004740 ORTHO05D066598 3.9e-06 57.0 88 43.2


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