Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2573 Cannabis sativa HOM05D007204 ORTHO05D008593 1.5e-110 402.9 214 100.0
QL01p040026 Quercus lobata HOM05D007204 ORTHO05D008593 9.8e-57 224.2 210 61.0
Dinv09663 Davidia involucrata HOM05D007204 ORTHO05D008593 2.7e-54 216.1 210 59.0
Prupe.6G050500 Prunus persica HOM05D007204 ORTHO05D008593 8.5e-53 211.1 212 54.2
GSVIVG01024663001 Vitis vinifera HOM05D007204 ORTHO05D008593 4.2e-52 208.8 199 60.8
FAN16G2350 Fragaria x ananassa HOM05D007204 ORTHO05D008593 3.6e-51 205.7 213 54.0
RcHm_v2.0_Chr5g0071301 Rosa chinensis HOM05D007204 ORTHO05D008593 4.7e-51 205.3 213 54.0
Atru.chr3.4133 Acer truncatum HOM05D007204 ORTHO05D008593 5.2e-50 201.8 203 56.2
FAN25G1877 Fragaria x ananassa HOM05D007204 ORTHO05D008593 6.8e-50 201.4 213 53.1
FvH4_3g39530 Fragaria vesca HOM05D007204 ORTHO05D008593 8.8e-50 201.1 213 53.1
MD11G1063300 Malus domestica HOM05D007204 ORTHO05D008593 3.4e-49 199.1 198 56.1
CiPaw.14G055100 Carya illinoinensis HOM05D007204 ORTHO05D008593 5.7e-49 198.4 210 52.9
Cfa011760 Carpinus fangiana HOM05D007204 ORTHO05D008593 7.5e-49 198.0 203 58.1
Duzib168G0028 Durio zibethinus HOM05D007204 ORTHO05D008593 8.3e-48 194.5 212 50.9
TWI31G1133 Tripterygium wilfordii HOM05D007204 ORTHO05D008593 1.4e-47 193.7 206 53.9
Potri.001G281500 Populus trichocarpa HOM05D007204 ORTHO05D008593 3.1e-47 192.6 201 55.2
PGR102G0940 Punica granatum HOM05D007204 ORTHO05D008593 3.1e-47 192.6 205 50.7
Hma1.2p1_0841F.1_g226930 Hydrangea macrophylla HOM05D007204 ORTHO05D008593 4.1e-47 192.2 168 61.9
FAN21G2638 Fragaria x ananassa HOM05D007204 ORTHO05D008593 3.5e-46 189.1 218 50.5
Cc01_g14730 Coffea canephora HOM05D007204 ORTHO05D008593 7.7e-46 188.0 209 52.6
Sed0020276 Sechium edule HOM05D007204 ORTHO05D008593 1.3e-45 187.2 209 51.7
Actinidia32616 Actinidia chinensis HOM05D007204 ORTHO05D008593 8.6e-45 184.5 214 51.4
Thecc.09G355900 Theobroma cacao HOM05D007204 ORTHO05D008593 5.6e-44 181.8 208 48.1
Ciclev10029273m.g Citrus clementina HOM05D007204 ORTHO05D008593 3.6e-43 179.1 163 54.6
Gohir.D03G142400 Gossypium hirsutum HOM05D007204 ORTHO05D008593 6.1e-43 178.3 210 49.5
FAN11G3207 Fragaria x ananassa HOM05D007204 ORTHO05D008593 1.0e-42 177.6 182 54.4
Gorai.003G149500 Gossypium raimondii HOM05D007204 ORTHO05D008593 1.8e-42 176.8 206 49.0
Lj6g0005890 Lotus japonicus HOM05D007204 ORTHO05D008593 2.6e-41 172.9 187 49.2
COL.COLO4_11129 Corchorus olitorius HOM05D007204 ORTHO05D008593 4.4e-41 172.2 213 49.8
MELO3C026086.2 Cucumis melo HOM05D007204 ORTHO05D008593 7.5e-41 171.4 204 50.5
Rhsim13G0065200 Rhododendron simsii HOM05D007204 ORTHO05D008593 9.8e-41 171.0 200 50.5
CsaV3_1G015330 Cucumis sativus L. HOM05D007204 ORTHO05D008593 2.2e-40 169.9 204 49.5
Nitab4.5_0007880g0040 Nicotiana tabacum HOM05D007204 ORTHO05D008593 2.9e-40 169.5 197 52.8
PGSC0003DMG400030457 Solanum tuberosum HOM05D007204 ORTHO05D008593 6.4e-40 168.3 197 52.8
TPR.G32886 Trifolium pratense HOM05D007204 ORTHO05D008593 6.4e-40 168.3 205 50.7
VMungo0540G1924 Vigna mungo HOM05D007204 ORTHO05D008593 8.3e-40 167.9 203 47.8
Gohir.A03G026100 Gossypium hirsutum HOM05D007204 ORTHO05D008593 5.4e-39 165.2 181 51.4
Phvul.006G073000 Phaseolus vulgaris HOM05D007204 ORTHO05D008593 5.4e-39 165.2 190 49.5
Sc21g0005220 Simmondsia chinensis HOM05D007204 ORTHO05D008593 7.0e-39 164.9 203 50.2
DCAR_012274 Daucus carota HOM05D007204 ORTHO05D008593 3.5e-38 162.5 185 51.4
Nn2g10986 Nelumbo nucifera HOM05D007204 ORTHO05D008593 4.6e-38 162.2 206 47.1
HanXRQChr08g0229231 Helianthus annuus HOM05D007204 ORTHO05D008593 5.9e-38 161.8 207 46.4
Psat5g153840 Pisum sativum HOM05D007204 ORTHO05D008593 5.9e-38 161.8 206 47.6
Migut.N00766 Erythranthe guttata HOM05D007204 ORTHO05D008593 3.0e-37 159.5 194 49.0
Eucgr.B03990 Eucalyptus grandis HOM05D007204 ORTHO05D008593 3.0e-37 159.5 211 46.9
PSO339G1295 Papaver somniferum HOM05D007204 ORTHO05D008593 1.1e-36 157.5 198 48.0
Manes.17G034600 Manihot esculenta HOM05D007204 ORTHO05D008593 1.9e-36 156.8 203 48.8
Carub.0001s0635 Capsella rubella HOM05D007204 ORTHO05D008593 3.3e-36 156.0 182 49.5
ClCG03G000270 Citrullus lanatus HOM05D007204 ORTHO05D008593 4.3e-36 155.6 213 48.8
Peaxi162Scf00390g00079 Petunia axillaris HOM05D007204 ORTHO05D008593 7.3e-36 154.8 205 49.3
THA.LOC104800761 Tarenaya hassleriana HOM05D007204 ORTHO05D008593 7.3e-36 154.8 200 48.0
BcaC05g24670 Brassica carinata HOM05D007204 ORTHO05D008593 9.5e-36 154.5 182 48.9
A10p05600 Brassica napus HOM05D007204 ORTHO05D008593 1.2e-35 154.1 182 48.9
C05p05140 Brassica napus HOM05D007204 ORTHO05D008593 1.2e-35 154.1 182 48.4
BcaNung06767 Brassica carinata HOM05D007204 ORTHO05D008593 3.6e-35 152.5 182 48.4
Aqoxy2G00798 Aquilegia oxysepala HOM05D007204 ORTHO05D008593 4.7e-35 152.1 160 50.6
CARHR006750 Cardamine hirsuta HOM05D007204 ORTHO05D008593 1.4e-34 150.6 205 47.3
Medtr3g031680 Medicago truncatula HOM05D007204 ORTHO05D008593 1.4e-34 150.6 187 47.6
SGA_v2.0_scaffold146G36125 Striga asiatica HOM05D007204 ORTHO05D008593 1.4e-34 150.6 201 44.3
TAR623G0341 Trochodendron aralioides HOM05D007204 ORTHO05D008593 1.4e-34 150.6 155 53.5
Thhalv10009490m.g Eutrema salsugineum HOM05D007204 ORTHO05D008593 1.8e-34 150.2 198 47.5
MSTRG.9779 Avicennia marina HOM05D007204 ORTHO05D008593 5.2e-34 148.7 193 46.1
AL1G17180 Arabidopsis lyrata HOM05D007204 ORTHO05D008593 8.9e-34 147.9 182 45.6
Lsat_1_v5_gn_9_18401 Lactuca sativa HOM05D007204 ORTHO05D008593 1.5e-33 147.1 214 43.5
AT1G07060 Arabidopsis thaliana HOM05D007204 ORTHO05D008593 2.0e-33 146.7 182 47.3
PSO801G0770 Papaver somniferum HOM05D007204 ORTHO05D008593 2.6e-33 146.4 198 45.5
Medtr3g031720 Medicago truncatula HOM05D007204 ORTHO05D008593 5.8e-33 145.2 187 46.0
AUR62009682 Chenopodium quinoa HOM05D007204 ORTHO05D008593 1.3e-32 144.1 216 42.1
Sp1g05780 Schrenkiella parvula HOM05D007204 ORTHO05D008593 2.2e-32 143.3 183 46.4
arahy.Tifrunner.gnm1.ann1.QCA2Y7 Arachis hypogaea HOM05D007204 ORTHO05D008593 4.9e-32 142.1 198 42.9
BraA10t42821Z Brassica rapa HOM05D007204 ORTHO05D008593 4.9e-32 142.1 206 43.2
Aa31LG1G8110 Aethionema arabicum HOM05D007204 ORTHO05D008593 8.3e-32 141.4 198 44.4
MBI03_g33621_MAGBIO Magnolia biondii HOM05D007204 ORTHO05D008593 1.1e-31 141.0 255 38.4
BolC5t29286H Brassica oleracea HOM05D007204 ORTHO05D008593 2.4e-31 139.8 206 43.2
arahy.Tifrunner.gnm1.ann1.IVNQ32 Arachis hypogaea HOM05D007204 ORTHO05D008593 1.6e-30 137.1 217 40.1
BcaNung06763 Brassica carinata HOM05D007204 ORTHO05D008593 3.5e-30 136.0 203 43.8
AUR62001886 Chenopodium quinoa HOM05D007204 ORTHO05D008593 1.3e-29 134.0 179 46.9
Glyma.18G058101 Glycine max HOM05D007204 ORTHO05D008593 8.6e-29 131.3 138 52.2
SalBow2G2431 Salvia bowleyana HOM05D007204 ORTHO05D008593 8.6e-29 131.3 182 44.5
Lj2A1091T48 Lonicera japonica HOM05D007204 ORTHO05D008593 1.5e-28 130.6 119 57.1
Nitab4.5_0009741g0040 Nicotiana tabacum HOM05D007204 ORTHO05D008593 2.5e-28 129.8 259 38.2
Sabra16G0175100 Salix brachista HOM05D007204 ORTHO05D008593 3.3e-28 129.4 123 56.9
Solyc06g082320.4 Solanum lycopersicum HOM05D007204 ORTHO05D008593 9.5e-28 127.9 144 54.2
Lalb_Chr15g0083171 Lupinus albus HOM05D007204 ORTHO05D008593 1.2e-27 127.5 139 50.4
HPP92_019711 Vanilla planifolia HOM05D000883 ORTHO05D002942 1.6e-27 127.1 198 40.9
ECA247G3086 Erigeron canadensis HOM05D007204 ORTHO05D008593 6.2e-27 125.2 315 31.7
Oeu034090.2 Olea europaea HOM05D007204 ORTHO05D008593 4.0e-26 122.5 140 51.4
CSS0017241 Camellia sinensis var. sinensis HOM05D007204 ORTHO05D008593 8.9e-26 121.3 121 52.1
BcaC05g24674 Brassica carinata HOM05D007204 ORTHO05D008593 1.2e-25 120.9 156 45.5
CSS0041349 Camellia sinensis var. sinensis HOM05D007204 ORTHO05D008593 2.6e-25 119.8 121 51.2
Hund18956 Selenicereus undatus HOM05D007204 ORTHO05D008593 2.9e-24 116.3 173 44.5
vmacro02927 Vaccinium macrocarpon HOM05D007204 ORTHO05D008593 6.0e-22 108.6 182 42.9
ATR0174G030 Amborella trichopoda HOM05D007204 ORTHO05D008593 3.3e-20 102.8 189 39.2
SGA_v2.0_scaffold120G32948 Striga asiatica HOM05D007204 ORTHO05D008593 1.6e-19 100.5 287 31.4
unitig_94.g28350 Utricularia gibba HOM05D007204 ORTHO05D008593 1.4e-18 97.4 128 42.2
Zm00001eb195020 Zea mays HOM05D007204 ORTHO05D008593 2.3e-18 96.7 201 34.8
Os12g0106100 Oryza sativa ssp. japonica HOM05D007204 ORTHO05D008593 1.2e-17 94.4 193 36.3
Os11g0106800 Oryza sativa ssp. japonica HOM05D007204 ORTHO05D008593 1.5e-17 94.0 121 46.3
Sopen06g033710 Solanum pennellii HOM05D007204 ORTHO05D008593 2.7e-14 83.2 96 51.0
SEGI_02179 Sequoiadendron giganteum HOM05D056589 ORTHO05D008593 4.6e-14 82.4 179 32.4
Ca_05090_v3 Cicer arietinum L. HOM05D007204 ORTHO05D008593 1.7e-08 63.9 86 44.2
Ca_14995_v3 Cicer arietinum L. HOM05D007204 ORTHO05D008593 1.7e-08 63.9 86 44.2
SMO358G0161 Selaginella moellendorffii HOM05D007204 ORTHO05D008593 3.2e-07 59.7 178 33.1
Zm00001eb025660 Zea mays HOM05D007204 ORTHO05D008593 1.6e-06 57.4 99 40.4


User provided reference genes

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