Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 6.6e-110 401.0 242 100.0
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 1.4e-27 127.5 232 39.7
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 4.5e-26 122.5 227 41.9
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 1.4e-22 110.9 135 49.6
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 6.8e-22 108.6 228 38.6
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.3e-20 104.4 84 66.7
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.2e-20 103.6 84 66.7
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 4.8e-20 102.4 228 39.9
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 8.3e-20 101.7 84 65.5
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 1.4e-19 100.9 227 37.9
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 4.1e-19 99.4 227 36.1
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 4.5e-18 95.9 73 68.5
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 5.9e-18 95.5 76 67.1
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.7e-17 94.0 80 66.2
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.9e-17 93.2 80 66.2
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 3.8e-17 92.8 128 45.3
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 5.0e-17 92.4 72 68.1
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 6.5e-17 92.0 125 44.0
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 3.2e-16 89.7 235 36.2
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.6e-15 87.4 86 61.6
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 2.1e-15 87.0 226 40.3
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 4.7e-15 85.9 73 65.8
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 6.1e-15 85.5 132 43.2
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 8.0e-15 85.1 72 63.9
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 8.0e-15 85.1 72 59.7
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 2.3e-14 83.6 74 62.2
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 5.2e-14 82.4 97 46.4
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 6.8e-14 82.0 73 58.9
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 6.8e-14 82.0 128 40.6
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 1.5e-13 80.9 76 59.2
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 3.4e-13 79.7 99 52.5
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 7.5e-13 78.6 97 46.4
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 9.8e-13 78.2 76 57.9
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 9.8e-13 78.2 76 57.9
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 9.8e-13 78.2 76 57.9
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 1.3e-12 77.8 246 32.5
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 1.7e-12 77.4 74 60.8
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 2.2e-12 77.0 77 54.5
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 3.7e-12 76.3 69 55.1
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 3.7e-12 76.3 135 41.5
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 4.9e-12 75.9 73 56.2
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 4.9e-12 75.9 130 45.4
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 4.9e-12 75.9 130 45.4
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 6.3e-12 75.5 130 45.4
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 6.3e-12 75.5 125 43.2
MD03G1095400 Malus domestica HOM05D005967 ORTHO05D005174 8.3e-12 75.1 135 41.5
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 1.1e-11 74.7 130 45.4
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 1.1e-11 74.7 77 54.5
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 1.1e-11 74.7 110 43.6
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 1.4e-11 74.3 129 38.8
Migut.N02671 Erythranthe guttata HOM05D005967 ORTHO05D005174 1.4e-11 74.3 72 56.9
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.4e-11 74.3 80 51.2
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.4e-11 74.3 80 51.2
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 1.8e-11 73.9 134 40.3
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 1.8e-11 73.9 70 55.7
RcHm_v2.0_Chr5g0064301 Rosa chinensis HOM05D005967 ORTHO05D005174 1.8e-11 73.9 140 41.4
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 2.4e-11 73.6 71 52.1
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 2.4e-11 73.6 123 39.0
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.1e-11 73.2 78 52.6
FAN25G3118 Fragaria x ananassa HOM05D005967 ORTHO05D005174 5.4e-11 72.4 130 44.6
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 1.2e-10 71.2 124 36.3
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 3.5e-10 69.7 80 52.5
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 3.5e-10 69.7 77 51.9
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 5.9e-10 68.9 75 53.3
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.0e-09 68.2 106 39.6
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.0e-09 68.2 106 39.6
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 1.0e-09 68.2 73 53.4
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.3e-09 67.8 75 48.0
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 1.7e-09 67.4 110 39.1
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 1.7e-09 67.4 76 47.4
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 1.7e-09 67.4 76 44.7
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 2.3e-09 67.0 73 54.8
Peaxi162Scf00832g00006 Petunia axillaris HOM05D030065 ORTHO05D005174 2.9e-09 66.6 71 54.9
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 2.9e-09 66.6 73 54.8
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 3.8e-09 66.2 74 52.7
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 3.8e-09 66.2 83 43.4
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 5.0e-09 65.9 73 47.9
Ca_28209_v3 Cicer arietinum L. HOM05D005967 ORTHO05D005174 8.6e-09 65.1 77 55.8
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 8.6e-09 65.1 75 49.3
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 1.1e-08 64.7 87 47.1
EL10As1g23034 Beta vulgaris HOM05D005967 ORTHO05D005174 1.5e-08 64.3 77 50.6
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 1.5e-08 64.3 73 53.4
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 1.9e-08 63.9 76 55.3
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 1.9e-08 63.9 64 54.7
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 3.3e-08 63.2 75 52.0
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.3e-08 63.2 75 45.3
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 4.3e-08 62.8 66 54.5
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 7.3e-08 62.0 140 35.7
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 1.2e-07 61.2 80 48.8
Nitab4.5_0004094g0010 Nicotiana tabacum HOM05D005967 ORTHO05D005174 1.2e-07 61.2 97 43.3
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 1.6e-07 60.8 83 43.4
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 2.1e-07 60.5 70 48.6
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 2.8e-07 60.1 79 45.6
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 2.8e-07 60.1 56 55.4
Sopen11g025730 Solanum pennellii HOM05D030065 ORTHO05D005174 3.6e-07 59.7 72 47.2
PGSC0003DMG400000470 Solanum tuberosum HOM05D030065 ORTHO05D005174 3.6e-07 59.7 72 47.2
Rhsim05G0192000 Rhododendron simsii HOM05D005967 ORTHO05D005174 4.7e-07 59.3 74 44.6
VMungo1309G2816 Vigna mungo HOM05D005967 ORTHO05D005174 4.7e-07 59.3 73 43.8
Eucgr.B02374 Eucalyptus grandis HOM05D005967 ORTHO05D005174 6.1e-07 58.9 81 40.7
Rhsim01G0227100 Rhododendron simsii HOM05D005967 ORTHO05D005174 6.1e-07 58.9 125 31.2
Medtr4g063885 Medicago truncatula HOM05D005967 ORTHO05D005174 8.0e-07 58.5 85 48.2
Phvul.L004943 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 1.0e-06 58.2 73 46.6
DCAR_020849 Daucus carota HOM05D005967 ORTHO05D005174 1.4e-06 57.8 78 47.4
Solyc11g066000.1 Solanum lycopersicum HOM05D030065 ORTHO05D005174 1.4e-06 57.8 72 47.2
Lj3g0001714 Lotus japonicus HOM05D005967 ORTHO05D005174 4.0e-06 56.2 104 37.5
Gorai.006G173200 Gossypium raimondii HOM05D036294 ORTHO05D036268 5.2e-06 55.8 61 54.1
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 6.8e-06 55.5 128 34.4
Psat3g141040 Pisum sativum HOM05D005967 ORTHO05D005174 6.8e-06 55.5 79 41.8
Psat0s8791g0040 Pisum sativum HOM05D005967 ORTHO05D005174 8.9e-06 55.1 65 55.4
TPR.G5598 Trifolium pratense HOM05D005967 ORTHO05D005174 8.9e-06 55.1 111 36.9


User provided reference genes

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