Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 4.8e-91 337.8 171 100.0
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 1.9e-87 325.9 166 98.8
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 2.9e-51 205.7 161 65.8
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 6.4e-51 204.5 193 61.1
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 5.4e-50 201.4 174 62.6
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 9.2e-50 200.7 194 59.3
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 2.7e-49 199.1 171 62.6
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 2.7e-49 199.1 173 60.7
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 4.6e-49 198.4 149 67.8
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 7.8e-49 197.6 149 67.1
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.0e-48 197.2 149 67.1
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 1.3e-48 196.8 192 60.4
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 2.3e-48 196.1 192 57.3
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 3.0e-48 195.7 137 70.8
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 3.0e-48 195.7 149 67.1
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 3.9e-48 195.3 192 60.4
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 6.6e-48 194.5 153 65.4
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 6.6e-48 194.5 174 60.9
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 8.6e-48 194.1 192 59.4
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 1.1e-47 193.7 192 58.9
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 1.5e-47 193.4 192 55.2
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 1.5e-47 193.4 151 65.6
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 2.5e-47 192.6 173 61.8
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 7.3e-47 191.0 137 68.6
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 7.3e-47 191.0 194 57.2
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 9.6e-47 190.7 194 55.2
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 1.2e-46 190.3 138 70.3
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 1.2e-46 190.3 198 56.1
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 2.1e-46 189.5 139 65.5
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 2.8e-46 189.1 139 67.6
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 4.7e-46 188.3 142 65.5
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 6.2e-46 188.0 142 64.8
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 1.1e-45 187.2 142 64.1
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 1.1e-45 187.2 138 65.2
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 1.4e-45 186.8 137 65.7
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 1.4e-45 186.8 200 55.0
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 1.4e-45 186.8 138 64.5
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.4e-45 186.8 156 58.3
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 1.4e-45 186.8 194 55.2
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.8e-45 186.4 149 64.4
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 1.8e-45 186.4 168 60.1
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 2.4e-45 186.0 138 66.7
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 3.1e-45 185.7 148 64.2
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 4.0e-45 185.3 183 56.8
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 4.0e-45 185.3 192 58.9
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 5.2e-45 184.9 143 65.0
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 5.2e-45 184.9 143 65.0
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 5.2e-45 184.9 143 65.0
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 5.2e-45 184.9 143 65.0
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 5.2e-45 184.9 143 65.0
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 5.2e-45 184.9 143 65.0
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 5.2e-45 184.9 138 63.8
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 6.8e-45 184.5 192 55.7
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 6.8e-45 184.5 150 62.7
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 8.9e-45 184.1 138 65.2
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 1.2e-44 183.7 152 61.2
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 1.2e-44 183.7 149 61.1
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 1.2e-44 183.7 142 62.0
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 1.5e-44 183.3 139 64.7
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 2.6e-44 182.6 159 59.7
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 3.4e-44 182.2 158 60.1
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 5.8e-44 181.4 161 60.2
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 5.8e-44 181.4 136 65.4
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 7.6e-44 181.0 147 62.6
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 9.9e-44 180.6 213 49.3
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 9.9e-44 180.6 149 60.4
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 2.2e-43 179.5 138 63.8
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 2.9e-43 179.1 138 64.5
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 3.8e-43 178.7 165 58.2
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 6.4e-43 177.9 148 62.2
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 1.1e-42 177.2 178 54.5
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 1.9e-42 176.4 155 61.9
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 2.4e-42 176.0 192 51.6
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 5.4e-42 174.9 136 64.7
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 5.4e-42 174.9 138 62.3
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 5.4e-42 174.9 138 62.3
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 9.3e-42 174.1 175 53.7
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 1.2e-41 173.7 152 60.5
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 1.6e-41 173.3 173 54.9
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 2.1e-41 172.9 136 64.7
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 2.1e-41 172.9 152 61.2
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 4.6e-41 171.8 149 59.1
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 1.0e-40 170.6 192 49.5
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 1.1e-39 167.2 151 58.3
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.3e-38 163.7 124 66.9
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 2.8e-38 162.5 173 52.6
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 2.4e-37 159.5 136 62.5
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 4.4e-36 155.2 142 53.5
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 7.6e-36 154.5 160 53.8
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 6.4e-35 151.4 167 49.7
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.9e-34 149.8 135 58.5
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 6.0e-33 144.8 112 64.3
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 2.8e-30 136.0 108 62.0
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 5.8e-28 128.3 135 48.1
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 2.2e-27 126.3 140 46.4
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 1.1e-23 114.0 123 50.4
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 2.5e-23 112.8 98 62.2
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 3.7e-22 109.0 192 36.5
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 4.8e-22 108.6 138 42.8
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 8.1e-22 107.8 65 78.5
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 2.1e-17 93.2 166 40.4


User provided reference genes

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