Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 5.5e-164 580.9 286 100.0
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 8.4e-64 248.1 168 69.0
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 8.4e-64 248.1 155 74.8
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 7.1e-63 245.0 155 72.9
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 7.1e-63 245.0 154 74.7
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 9.3e-63 244.6 150 74.0
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 7.9e-62 241.5 150 75.3
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 3.9e-61 239.2 159 69.8
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 1.9e-60 236.9 169 69.2
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 3.3e-60 236.1 181 66.3
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 3.7e-59 232.6 151 72.8
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 1.4e-58 230.7 162 67.3
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 2.4e-58 229.9 150 70.7
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 9.0e-58 228.0 149 72.5
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 2.6e-57 226.5 157 68.8
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 2.2e-56 223.4 153 68.6
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 8.5e-56 221.5 158 66.5
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 2.5e-55 219.9 148 70.9
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 7.2e-55 218.4 150 72.0
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 9.3e-55 218.0 154 67.5
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 2.1e-54 216.9 148 68.9
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 2.1e-54 216.9 148 67.6
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 2.1e-54 216.9 162 64.2
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 3.6e-54 216.1 155 66.5
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 3.6e-54 216.1 166 63.3
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 1.3e-53 214.2 148 68.9
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 1.8e-53 213.8 150 68.0
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 8.7e-53 211.5 149 68.5
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 1.1e-52 211.1 222 49.1
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.5e-52 209.9 158 62.0
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.5e-52 209.9 158 62.0
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.5e-52 209.9 158 62.0
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 3.3e-52 209.5 157 65.6
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 3.3e-52 209.5 149 67.1
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 5.7e-52 208.8 158 62.0
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 9.7e-52 208.0 157 65.0
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 2.8e-51 206.5 147 67.3
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 2.8e-51 206.5 158 64.6
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 3.7e-51 206.1 150 65.3
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 4.8e-51 205.7 162 59.3
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 4.8e-51 205.7 166 62.0
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 6.3e-51 205.3 150 65.3
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 8.2e-51 204.9 148 64.9
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 1.4e-50 204.1 166 61.4
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 1.8e-50 203.8 150 62.0
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 4.1e-50 202.6 170 59.4
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 4.1e-50 202.6 152 65.8
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 1.5e-49 200.7 161 65.2
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 2.0e-49 200.3 153 64.7
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 5.9e-49 198.7 152 62.5
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 1.0e-48 198.0 154 63.6
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 1.7e-48 197.2 164 61.6
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 2.2e-48 196.8 131 67.9
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 6.5e-48 195.3 132 67.4
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 4.2e-47 192.6 131 67.9
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 4.2e-47 192.6 162 63.0
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 1.6e-46 190.7 166 57.2
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 2.1e-46 190.3 166 55.4
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 2.1e-46 190.3 166 55.4
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 2.7e-46 189.9 166 56.0
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 4.6e-46 189.1 138 64.5
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 4.6e-46 189.1 149 61.7
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 7.9e-46 188.3 150 57.3
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 1.1e-44 184.5 150 60.7
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 3.3e-44 183.0 147 62.6
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 4.4e-44 182.6 157 56.1
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 9.7e-44 181.4 150 58.0
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 3.7e-43 179.5 140 59.3
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 1.1e-42 177.9 201 47.3
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 9.1e-42 174.9 133 66.2
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 2.0e-41 173.7 132 61.4
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 2.6e-41 173.3 145 57.9
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 4.5e-41 172.6 150 55.3
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 1.0e-40 171.4 150 55.3
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 1.7e-40 170.6 160 51.9
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 6.5e-40 168.7 154 54.5
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 1.9e-39 167.2 150 52.7
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 1.9e-39 167.2 160 51.2
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 2.5e-39 166.8 142 57.0
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 2.5e-39 166.8 155 54.2
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 5.5e-39 165.6 170 53.5
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 3.0e-37 159.8 172 51.2
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 2.0e-36 157.1 129 58.1
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 1.1e-34 151.4 116 62.1
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 1.4e-34 151.0 206 41.7
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 3.1e-34 149.8 99 68.7
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 7.0e-34 148.7 127 57.5
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 3.5e-33 146.4 147 46.9
CANSAT54G1816 Cannabis sativa HOM05D000068 ORTHO05D004908 1.1e-31 141.4 118 71.2
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 2.5e-31 140.2 132 54.5
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 9.4e-31 138.3 135 51.9
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.8e-29 134.0 81 75.3
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 2.6e-28 130.2 80 76.2
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 1.3e-27 127.9 161 47.2
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 4.8e-27 125.9 101 53.5
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 5.0e-24 115.9 92 59.8
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 5.0e-24 115.9 99 58.6
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 5.5e-23 112.5 99 57.6
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 7.2e-23 112.1 85 64.7
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 6.1e-22 109.0 86 61.6
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 1.4e-21 107.8 139 44.6
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 3.0e-21 106.7 78 69.2
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 3.0e-21 106.7 76 61.8
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 1.4e-18 97.8 151 37.7
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 2.4e-18 97.1 136 39.0
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 7.0e-18 95.5 67 68.7
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 3.8e-16 89.7 73 54.8
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 1.5e-15 87.8 110 46.4
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 1.5e-12 77.8 60 65.0
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 1.8e-10 70.9 75 50.7
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 1.2e-09 68.2 73 49.3
MCO11G099 Micromonas commoda HOM05D007186 ORTHO05D008970 7.8e-09 65.5 108 31.5
MD17G1110300 Malus domestica HOM05D007186 ORTHO05D008970 8.6e-08 62.0 42 66.7


User provided reference genes

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