Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 0.0e+00 1656.3 879 100.0
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 7.5e-305 1050.4 812 65.3
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 2.0e-297 1025.8 810 65.2
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.3e-296 1023.1 823 65.1
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 6.4e-296 1020.8 883 61.5
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 1.6e-294 1016.1 878 61.7
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 7.8e-294 1013.8 814 64.0
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 5.1e-293 1011.1 817 64.6
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 5.6e-292 1007.7 814 64.5
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 4.0e-290 1001.5 835 62.9
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 4.1e-287 991.5 812 63.4
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 5.1e-285 984.6 868 64.1
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 5.6e-284 981.1 813 64.8
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 2.8e-283 978.8 814 64.1
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 4.2e-279 964.9 820 61.2
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 2.5e-276 955.7 826 63.8
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 3.3e-276 955.3 821 62.7
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 2.8e-275 952.2 814 62.3
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 2.4e-274 949.1 784 65.8
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 5.3e-274 948.0 784 63.3
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 9.0e-274 947.2 825 60.1
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 9.9e-273 943.7 809 62.1
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 3.8e-272 941.8 813 62.5
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.2e-270 936.8 814 62.3
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 6.0e-270 934.5 815 62.1
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.0e-269 933.7 812 61.8
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 3.3e-268 928.7 783 62.1
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 4.3e-268 928.3 800 61.9
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 9.6e-268 927.2 728 66.1
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 2.1e-267 926.0 793 62.9
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 9.0e-266 920.6 790 61.5
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 4.5e-265 918.3 792 61.6
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 1.3e-264 916.8 800 61.2
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 1.0e-261 907.1 812 61.0
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 1.8e-261 906.4 793 59.8
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 6.7e-261 904.4 792 59.7
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 6.7e-261 904.4 676 68.5
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 8.7e-261 904.0 785 60.5
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 3.3e-260 902.1 774 61.5
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 4.3e-260 901.7 568 73.6
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 1.8e-258 896.3 832 58.8
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 2.2e-256 889.4 708 65.3
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 4.9e-256 888.3 899 54.9
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 1.1e-255 887.1 794 60.7
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 2.5e-255 885.9 805 59.5
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 3.2e-255 885.6 808 58.8
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 1.6e-254 883.2 809 58.3
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 4.6e-254 881.7 713 64.2
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 6.0e-254 881.3 811 59.1
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 1.0e-253 880.6 822 57.5
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 3.9e-253 878.6 801 60.4
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 8.7e-253 877.5 717 64.2
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 8.7e-253 877.5 728 63.3
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 1.1e-252 877.1 813 58.2
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 3.7e-251 872.1 671 66.8
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 4.8e-251 871.7 831 57.6
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 1.0e-248 864.0 787 57.1
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 1.1e-247 860.5 800 59.6
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 9.3e-247 857.4 783 60.0
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 9.3e-247 857.4 671 65.3
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 4.6e-246 855.1 809 56.1
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 1.3e-245 853.6 544 72.8
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 2.3e-245 852.8 790 57.3
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 8.7e-245 850.9 813 56.8
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 5.7e-244 848.2 806 58.4
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 3.4e-241 839.0 799 58.7
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 7.7e-241 837.8 786 59.2
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 6.7e-237 824.7 816 56.4
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 4.8e-235 818.5 803 55.9
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 3.1e-234 815.8 699 62.1
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 1.3e-232 810.4 768 56.0
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 3.2e-231 805.8 783 57.3
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 9.4e-231 804.3 775 55.9
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 3.9e-229 798.9 824 54.4
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 3.3e-228 795.8 782 56.1
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 8.2e-227 791.2 776 56.6
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 1.7e-224 783.5 798 54.5
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 8.5e-224 781.2 839 52.4
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 4.2e-223 778.9 692 60.4
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 2.7e-222 776.2 814 53.1
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 5.3e-218 761.9 768 54.2
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 5.5e-215 751.9 790 53.9
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 8.0e-214 748.0 887 49.4
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 2.3e-213 746.5 829 52.5
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 2.6e-212 743.0 888 49.0
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 2.7e-206 723.0 616 63.6
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 1.6e-198 697.2 790 50.0
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 6.2e-174 615.5 577 59.1
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 3.1e-157 560.1 475 57.1
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 1.7e-155 554.3 401 66.3
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 2.7e-153 547.0 557 49.9
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 5.6e-151 539.3 330 72.7
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 3.1e-149 533.5 804 44.7
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.7e-147 527.7 585 54.0
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 1.9e-143 514.2 490 60.0
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 3.8e-139 500.0 583 48.0
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 1.1e-130 471.9 408 63.2
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.8e-128 464.5 264 76.5
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 2.4e-109 401.0 423 49.6
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 3.3e-103 380.6 404 49.5
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 7.2e-98 362.8 528 47.9
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 3.0e-96 357.5 350 52.0
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 7.5e-95 352.8 187 84.0
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 6.8e-88 329.7 196 76.0
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 3.0e-75 287.7 433 44.3
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 9.5e-74 282.7 182 69.8
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 1.3e-51 209.1 329 48.3
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 1.2e-36 159.5 117 66.7
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 2.4e-32 145.2 81 77.8
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 8.4e-30 136.7 393 29.8
HPP92_011562 Vanilla planifolia HOM05D007000 ORTHO05D009020 6.7e-19 100.5 109 43.1
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 3.3e-18 98.2 77 58.4
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 9.0e-16 90.1 72 50.0
Potri.004G188432 Populus trichocarpa HOM05D007000 ORTHO05D030830 2.8e-09 68.6 100 46.0
Actinidia27040 Actinidia chinensis HOM05D007000 ORTHO05D030830 1.1e-08 66.6 284 34.9
Oeu040143.1 Olea europaea HOM05D007000 ORTHO05D288686 8.5e-06 57.0 53 50.9


User provided reference genes

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