Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2394 Cannabis sativa HOM05D006536 ORTHO05D005877 3.9e-57 224.6 111 100.0
CANSAT54G1080 Cannabis sativa HOM05D006536 ORTHO05D005877 2.1e-50 202.2 127 83.5
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 2.9e-20 102.1 103 52.4
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.0e-12 74.7 92 42.4
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 6.5e-12 74.3 93 44.1
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 1.1e-11 73.6 94 41.5
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 1.9e-11 72.8 94 41.5
Sopen07g032350 Solanum pennellii HOM05D006536 ORTHO05D005877 1.9e-11 72.8 94 41.5
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 7.2e-11 70.9 92 39.1
PSO541G5532 Papaver somniferum HOM05D006536 ORTHO05D005877 1.2e-10 70.1 89 39.3
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 2.1e-10 69.3 92 41.3
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 2.7e-10 68.9 92 39.1
Sopen07g032370 Solanum pennellii HOM05D006536 ORTHO05D005877 2.7e-10 68.9 84 40.5
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 4.6e-10 68.2 89 41.6
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 6.1e-10 67.8 93 38.7
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 6.1e-10 67.8 92 41.3
PSO478G5239 Papaver somniferum HOM05D006536 ORTHO05D005877 7.9e-10 67.4 62 50.0
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 7.9e-10 67.4 92 38.0
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.4e-09 66.6 92 38.0
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.3e-09 65.9 92 38.0
PSO675G9181 Papaver somniferum HOM05D006536 ORTHO05D005877 2.3e-09 65.9 89 40.4
QL08p013066 Quercus lobata HOM05D006536 ORTHO05D005877 2.3e-09 65.9 129 36.4
AUR62015663 Chenopodium quinoa HOM05D009374 ORTHO05D005877 3.0e-09 65.5 84 39.3
PSO017G6165 Papaver somniferum HOM05D006536 ORTHO05D005877 3.0e-09 65.5 62 48.4
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 3.0e-09 65.5 93 41.9
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 5.1e-09 64.7 58 50.0
PSO541G3913 Papaver somniferum HOM05D006536 ORTHO05D005877 5.1e-09 64.7 91 39.6
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 6.7e-09 64.3 144 29.9
AUR62020540 Chenopodium quinoa HOM05D009374 ORTHO05D005877 8.8e-09 63.9 83 39.8
PSO541G2788 Papaver somniferum HOM05D006536 ORTHO05D005877 8.8e-09 63.9 83 41.0
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 2.5e-08 62.4 152 28.3
ClCG09G018590 Citrullus lanatus HOM05D006536 ORTHO05D005877 2.5e-08 62.4 58 50.0
MELO3C025418.2 Cucumis melo HOM05D006536 ORTHO05D005877 2.5e-08 62.4 61 45.9
Nitab4.5_0008018g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.5e-08 62.4 92 37.0
CDE11G0063 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 5.7e-08 61.2 74 41.9
CDE11G0553 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 9.7e-08 60.5 94 39.4
Solyc07g064220.1 Solanum lycopersicum HOM05D006536 ORTHO05D005877 9.7e-08 60.5 95 33.7
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 1.3e-07 60.1 94 38.3
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 1.3e-07 60.1 95 35.8
Sopen07g032360 Solanum pennellii HOM05D006536 ORTHO05D005877 1.3e-07 60.1 94 34.0
Migut.J01035 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.7e-07 59.7 86 38.4
Nitab4.5_0001479g0070 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.2e-07 59.3 88 34.1
PSO782G1199 Papaver somniferum HOM05D006536 ORTHO05D005877 2.2e-07 59.3 62 45.2
PGSC0003DMG400001052 Solanum tuberosum HOM05D006536 ORTHO05D005877 2.8e-07 58.9 67 37.3
MELO3C032238.2 Cucumis melo HOM05D006536 ORTHO05D005877 6.3e-07 57.8 75 40.0
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 6.3e-07 57.8 87 37.9
Lsat_1_v5_gn_3_115460 Lactuca sativa HOM05D006536 ORTHO05D005877 6.3e-07 57.8 101 36.6
SGA_v2.0_scaffold20G09060 Striga asiatica HOM05D006536 ORTHO05D005877 8.2e-07 57.4 82 32.9
PGR083G0622 Punica granatum HOM05D006536 ORTHO05D005877 1.4e-06 56.6 62 48.4
ClCG10G005660 Citrullus lanatus HOM05D006536 ORTHO05D005877 1.8e-06 56.2 75 38.7
Eucgr.F00977 Eucalyptus grandis HOM05D006536 ORTHO05D005877 1.8e-06 56.2 69 39.1
Nitab4.5_0001479g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.8e-06 56.2 92 38.0
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 3.1e-06 55.5 89 31.5
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 3.1e-06 55.5 87 36.8
CsaV3_3G005360 Cucumis sativus L. HOM05D006536 ORTHO05D005877 3.1e-06 55.5 75 37.3
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 3.1e-06 55.5 89 36.0
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 3.1e-06 55.5 70 38.6
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 4.1e-06 55.1 94 26.6
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 5.3e-06 54.7 91 29.7
Migut.J01038 Erythranthe guttata HOM05D006536 ORTHO05D005877 5.3e-06 54.7 67 41.8
Lsat_1_v5_gn_3_115400 Lactuca sativa HOM05D006536 ORTHO05D005877 6.9e-06 54.3 99 32.3


User provided reference genes

Program Settings