Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 5.7e-169 597.4 290 100.0
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 2.1e-150 535.8 289 87.2
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 6.0e-142 507.7 289 83.0
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 7.8e-142 507.3 289 82.7
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 7.8e-142 507.3 289 82.7
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 7.8e-142 507.3 289 82.4
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 2.3e-141 505.8 289 83.4
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 5.1e-141 504.6 289 82.0
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 1.9e-140 502.7 288 81.2
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 3.3e-140 501.9 289 81.7
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 4.3e-140 501.5 289 80.3
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 4.3e-140 501.5 289 82.0
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 4.3e-140 501.5 289 82.0
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 4.3e-140 501.5 289 81.0
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 5.6e-140 501.1 289 80.6
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 5.6e-140 501.1 285 82.5
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 1.6e-139 499.6 285 82.5
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 1.6e-139 499.6 289 82.0
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 2.1e-139 499.2 289 80.3
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 2.8e-139 498.8 289 81.7
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 4.7e-139 498.0 289 81.0
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 6.2e-139 497.7 289 79.9
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 6.2e-139 497.7 289 81.3
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 1.1e-138 496.9 286 81.1
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 1.4e-138 496.5 285 81.8
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 1.8e-138 496.1 289 78.9
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 6.8e-138 494.2 289 78.9
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 1.5e-137 493.0 289 79.2
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 1.5e-137 493.0 289 79.2
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.5e-137 493.0 289 80.3
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.5e-137 493.0 289 78.9
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.0e-137 492.7 289 81.3
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 2.6e-137 492.3 289 78.9
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 2.6e-137 492.3 286 80.1
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 3.4e-137 491.9 289 79.2
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 7.6e-137 490.7 289 78.2
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 7.6e-137 490.7 289 80.3
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 1.3e-136 490.0 320 74.4
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 1.3e-136 490.0 288 78.5
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.7e-136 489.6 289 79.6
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 1.7e-136 489.6 289 79.6
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 2.2e-136 489.2 287 79.8
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 2.2e-136 489.2 287 79.8
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 2.9e-136 488.8 289 79.2
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 2.9e-136 488.8 289 78.2
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 4.9e-136 488.0 289 79.2
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 6.4e-136 487.6 289 78.2
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 8.4e-136 487.3 289 79.9
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 8.4e-136 487.3 286 78.3
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 1.1e-135 486.9 289 77.2
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 1.1e-135 486.9 289 77.2
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.1e-135 486.9 289 78.9
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 1.4e-135 486.5 286 79.0
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 1.4e-135 486.5 289 78.5
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 1.9e-135 486.1 289 77.5
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 3.2e-135 485.3 289 79.2
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 3.2e-135 485.3 289 79.6
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 4.2e-135 485.0 289 78.2
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 4.2e-135 485.0 289 77.2
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 5.4e-135 484.6 289 77.2
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 5.4e-135 484.6 289 78.5
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 7.1e-135 484.2 289 78.5
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 9.3e-135 483.8 291 78.0
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 1.6e-134 483.0 289 77.5
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 2.1e-134 482.6 289 77.2
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 3.5e-134 481.9 289 77.5
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 6.0e-134 481.1 289 77.2
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 1.7e-133 479.6 286 78.0
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 2.3e-133 479.2 289 76.8
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 6.6e-133 477.6 289 76.1
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 6.6e-133 477.6 289 77.9
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 6.6e-133 477.6 271 83.0
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 8.7e-133 477.2 289 77.5
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 1.9e-132 476.1 289 77.2
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.9e-132 476.1 287 78.4
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 2.5e-132 475.7 289 75.8
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 3.3e-132 475.3 289 75.8
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 3.3e-132 475.3 289 75.8
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 3.3e-132 475.3 289 76.8
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 3.3e-132 475.3 275 82.2
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 4.3e-132 474.9 286 78.3
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 7.3e-132 474.2 280 78.2
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 2.8e-131 472.2 289 76.8
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 2.8e-131 472.2 289 76.5
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 4.8e-131 471.5 289 77.5
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 6.2e-131 471.1 288 75.3
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 6.2e-131 471.1 288 75.3
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 8.1e-131 470.7 289 75.8
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 1.4e-130 469.9 289 75.1
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 1.4e-130 469.9 288 73.6
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 2.4e-130 469.2 287 75.3
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 4.0e-130 468.4 289 74.0
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 2.0e-129 466.1 289 74.7
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 7.6e-129 464.2 287 74.6
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 9.9e-129 463.8 289 76.1
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 1.3e-128 463.4 287 74.2
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.7e-128 463.0 289 75.8
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 4.9e-128 461.5 289 74.7
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 8.4e-128 460.7 271 80.4
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 1.9e-127 459.5 288 76.4
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 2.4e-127 459.1 289 73.4
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 1.0e-125 453.8 271 79.3
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 2.5e-124 449.1 291 71.8
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 2.4e-122 442.6 310 70.3
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 1.2e-121 440.3 271 75.3
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 2.9e-120 435.6 289 72.7
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 4.9e-120 434.9 251 79.3
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 6.4e-120 434.5 289 72.7
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 8.4e-120 434.1 287 69.3
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 7.1e-119 431.0 287 68.3
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 1.2e-118 430.3 308 67.5
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 8.7e-117 424.1 282 68.8
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 4.3e-116 421.8 289 69.6
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.9e-111 406.4 270 72.6
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 9.3e-111 404.1 268 69.4
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 1.5e-108 396.7 270 66.7
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 3.1e-106 389.0 282 63.5
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 2.1e-94 349.7 219 74.0
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 3.4e-89 332.4 320 55.6
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 8.2e-83 311.2 183 79.8
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 5.0e-80 302.0 291 48.8
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 8.5e-80 301.2 187 74.9
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 2.6e-76 289.7 180 75.0
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 2.6e-76 289.7 296 50.3
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 4.4e-76 288.9 170 78.8
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 4.8e-75 285.4 291 50.9
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 3.8e-72 275.8 188 68.1
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 1.0e-69 267.7 291 45.4
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 7.0e-58 228.4 313 42.8
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 1.1e-50 204.5 164 63.4
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.4e-50 203.4 221 50.2
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.0e-48 198.0 221 49.3
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 2.8e-46 189.9 119 74.8
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.3e-39 166.0 99 74.7
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 5.6e-39 165.6 98 75.5
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.0e-37 159.5 93 76.3
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 1.1e-26 124.8 75 77.3
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.5e-20 104.4 93 57.0
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 7.6e-20 102.1 164 37.8
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 6.0e-09 65.9 51 56.9
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 2.3e-08 63.9 39 76.9


User provided reference genes

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