Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2237 Cannabis sativa HOM05D002956 ORTHO05D009000 2.6e-175 618.6 309 100.0
Lalb_Chr15g0078501 Lupinus albus HOM05D002956 ORTHO05D009000 1.4e-83 313.9 273 60.1
TAR633G2508 Trochodendron aralioides HOM05D002956 ORTHO05D009000 8.8e-83 311.2 281 59.8
Atru.chr3.2859 Acer truncatum HOM05D002956 ORTHO05D009000 1.7e-81 307.0 235 65.5
Manes.02G137000 Manihot esculenta HOM05D002956 ORTHO05D009000 4.8e-81 305.4 263 58.2
Dinv04582 Davidia involucrata HOM05D000102 ORTHO05D000138 1.8e-80 303.5 229 65.5
CSS0047298 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D009000 4.1e-80 302.4 288 56.6
Potri.009G068300 Populus trichocarpa HOM05D002956 ORTHO05D009000 1.2e-79 300.8 258 59.7
Thecc.09G246200 Theobroma cacao HOM05D002956 ORTHO05D009000 1.5e-79 300.4 266 59.0
Cpa.g.sc34.182 Carica papaya HOM05D002956 ORTHO05D009000 4.5e-79 298.9 250 60.8
Hma1.2p1_0460F.1_g157580 Hydrangea macrophylla HOM05D002956 ORTHO05D009000 4.5e-79 298.9 282 59.9
Aqoxy2G00440 Aquilegia oxysepala HOM05D002956 ORTHO05D009000 1.3e-78 297.4 290 55.2
CsaV3_6G038840 Cucumis sativus L. HOM05D002956 ORTHO05D009000 2.9e-78 296.2 223 62.8
RcHm_v2.0_Chr5g0050271 Rosa chinensis HOM05D002956 ORTHO05D009000 2.9e-78 296.2 234 63.7
MD00G1134800 Malus domestica HOM05D002956 ORTHO05D009000 3.8e-78 295.8 278 57.2
Lj6g0021242 Lotus japonicus HOM05D002956 ORTHO05D009000 7.2e-77 291.6 250 59.2
MD00G1148000 Malus domestica HOM05D002956 ORTHO05D009000 1.2e-76 290.8 291 56.0
VMungo1080G0193 Vigna mungo HOM05D002956 ORTHO05D009000 1.2e-76 290.8 267 58.4
Gohir.A05G073600 Gossypium hirsutum HOM05D002956 ORTHO05D009000 1.6e-76 290.4 267 58.1
Phvul.005G020500 Phaseolus vulgaris HOM05D002956 ORTHO05D009000 1.6e-76 290.4 223 64.1
Sabra09G0051400 Salix brachista HOM05D002956 ORTHO05D009000 2.7e-76 289.7 268 57.1
Gohir.D05G076500 Gossypium hirsutum HOM05D002956 ORTHO05D009000 3.6e-76 289.3 267 58.1
Gorai.009G077800 Gossypium raimondii HOM05D002956 ORTHO05D009000 3.6e-76 289.3 267 58.1
Actinidia06979 Actinidia chinensis HOM05D002956 ORTHO05D009000 7.9e-76 288.1 236 61.9
Cfa009899 Carpinus fangiana HOM05D002956 ORTHO05D009000 7.9e-76 288.1 262 59.5
Duzib150G0064 Durio zibethinus HOM05D002956 ORTHO05D009000 3.0e-75 286.2 262 57.6
MELO3C014549.2 Cucumis melo HOM05D002956 ORTHO05D009000 5.1e-75 285.4 236 58.9
Eucgr.B03751 Eucalyptus grandis HOM05D002956 ORTHO05D009000 1.5e-74 283.9 225 62.7
FAN20G2737 Fragaria x ananassa HOM05D002956 ORTHO05D009000 2.0e-74 283.5 222 64.0
PSO384G3893 Papaver somniferum HOM05D002956 ORTHO05D009000 2.6e-74 283.1 222 64.0
Glyma.15G273500 Glycine max HOM05D002956 ORTHO05D009000 3.3e-74 282.7 252 57.9
PGR102G2739 Punica granatum HOM05D002956 ORTHO05D009000 4.4e-74 282.3 219 63.0
FAN27G0310 Fragaria x ananassa HOM05D002956 ORTHO05D009000 5.7e-74 282.0 237 61.2
Cc01_g06260 Coffea canephora HOM05D002956 ORTHO05D009000 7.4e-74 281.6 294 54.4
TWI31G1447 Tripterygium wilfordii HOM05D002956 ORTHO05D009000 7.4e-74 281.6 238 60.9
CDE08G0764 Ceratophyllum demersum HOM05D002956 ORTHO05D009000 9.7e-74 281.2 216 63.0
PSO339G4249 Papaver somniferum HOM05D002956 ORTHO05D009000 9.7e-74 281.2 219 64.4
FAN22G1360 Fragaria x ananassa HOM05D002956 ORTHO05D009000 1.7e-73 280.4 237 61.2
FvH4_2g35650 Fragaria vesca HOM05D002956 ORTHO05D009000 2.8e-73 279.6 237 60.3
Ca_26337_v3 Cicer arietinum L. HOM05D002956 ORTHO05D009000 3.7e-73 279.3 212 65.6
Migut.N02380 Erythranthe guttata HOM05D002956 ORTHO05D009000 3.7e-73 279.3 235 64.7
QL01p016676 Quercus lobata HOM05D002956 ORTHO05D009000 3.7e-73 279.3 315 51.7
GSVIVG01037339001 Vitis vinifera HOM05D002956 ORTHO05D009000 3.7e-73 279.3 177 74.0
Glyma.08G154600 Glycine max HOM05D002956 ORTHO05D009000 6.3e-73 278.5 256 57.8
Medtr3g437110 Medicago truncatula HOM05D002956 ORTHO05D009000 6.3e-73 278.5 211 64.0
Migut.D00676 Erythranthe guttata HOM05D002956 ORTHO05D009000 8.2e-73 278.1 303 51.8
MBI19_g19212_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D009000 1.4e-72 277.3 269 57.6
Lsat_1_v5_gn_5_63121 Lactuca sativa HOM05D002956 ORTHO05D009000 4.1e-72 275.8 234 60.7
TPR.G11887 Trifolium pratense HOM05D002956 ORTHO05D009000 4.1e-72 275.8 228 60.5
unitig_8.g3652 Utricularia gibba HOM05D002956 ORTHO05D009000 5.3e-72 275.4 224 59.8
arahy.Tifrunner.gnm1.ann1.NKUQ81 Arachis hypogaea HOM05D002956 ORTHO05D009000 7.0e-72 275.0 212 64.6
arahy.Tifrunner.gnm1.ann1.UED96S Arachis hypogaea HOM05D002956 ORTHO05D009000 9.1e-72 274.6 212 64.6
ATR0307G004 Amborella trichopoda HOM05D002956 ORTHO05D009000 1.2e-71 274.2 219 62.1
FAN15G3287 Fragaria x ananassa HOM05D002956 ORTHO05D009000 2.0e-71 273.5 237 59.9
Sc16g0010930 Simmondsia chinensis HOM05D002956 ORTHO05D009000 1.3e-70 270.8 283 55.5
Aa31LG5G8950 Aethionema arabicum HOM05D002956 ORTHO05D009000 1.7e-70 270.4 269 55.4
Ciclev10016188m.g Citrus clementina HOM05D002956 ORTHO05D009000 2.9e-70 269.6 223 60.5
MSTRG.17638 Avicennia marina HOM05D002956 ORTHO05D009000 3.8e-70 269.2 310 50.6
HPP92_025063 Vanilla planifolia HOM05D002956 ORTHO05D009000 1.1e-69 267.7 227 59.9
Sopen01g004220 Solanum pennellii HOM05D002956 ORTHO05D009000 1.5e-69 267.3 242 57.9
SGA_v2.0_scaffold29G12222 Striga asiatica HOM05D002956 ORTHO05D009000 3.2e-69 266.2 313 50.2
Oeu027216.2 Olea europaea HOM05D002956 ORTHO05D009000 9.4e-69 264.6 296 51.7
Solyc01g008700.4 Solanum lycopersicum HOM05D002956 ORTHO05D009000 1.2e-68 264.2 242 57.4
PGSC0003DMG400004431 Solanum tuberosum HOM05D002956 ORTHO05D009000 1.6e-68 263.8 226 59.3
EL10Ac4g10093 Beta vulgaris HOM05D002956 ORTHO05D009000 2.1e-68 263.5 277 54.2
AUR62006560 Chenopodium quinoa HOM05D002956 ORTHO05D009000 4.7e-68 262.3 266 55.3
Haze_23260 Corylus avellana HOM05D002956 ORTHO05D009000 1.0e-67 261.2 354 47.5
HanXRQChr12g0380431 Helianthus annuus HOM05D002956 ORTHO05D009000 1.0e-67 261.2 250 56.0
AUR62000215 Chenopodium quinoa HOM05D002956 ORTHO05D009000 2.3e-67 260.0 232 58.2
THA.LOC104826457 Tarenaya hassleriana HOM05D002956 ORTHO05D009000 4.0e-67 259.2 277 54.2
SalBow6G2483 Salvia bowleyana HOM05D002956 ORTHO05D009000 1.1e-66 257.7 312 49.7
ECA233G2896 Erigeron canadensis HOM05D000003 ORTHO05D009000 5.7e-66 255.4 177 65.5
Thhalv10002070m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 5.7e-66 255.4 274 55.1
Peaxi162Scf00032g02025 Petunia axillaris HOM05D002956 ORTHO05D009000 1.7e-65 253.8 250 54.8
Ah.06g194750 Amaranthus hybridus HOM05D002956 ORTHO05D009000 1.8e-64 250.4 291 51.5
A03p26830 Brassica napus HOM05D002956 ORTHO05D008031 1.8e-64 250.4 267 55.1
BraA03t11895Z Brassica rapa HOM05D002956 ORTHO05D008031 3.1e-64 249.6 253 56.5
DCAR_006895 Daucus carota HOM05D002956 ORTHO05D009000 4.1e-64 249.2 230 57.8
BolC3t15559H Brassica oleracea HOM05D002956 ORTHO05D008031 2.0e-63 246.9 257 55.3
BcaC01g04913 Brassica carinata HOM05D002956 ORTHO05D008031 5.9e-63 245.4 256 55.1
BcaB01g03033 Brassica carinata HOM05D002956 ORTHO05D008031 7.7e-63 245.0 248 54.4
C03p32170 Brassica napus HOM05D002956 ORTHO05D008031 1.7e-62 243.8 256 54.7
Thhalv10002099m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 1.1e-61 241.1 186 65.1
Rhsim13G0206200 Rhododendron simsii HOM05D002956 ORTHO05D009000 9.4e-61 238.0 424 38.2
Carub.0004s0731 Capsella rubella HOM05D002956 ORTHO05D009000 2.1e-60 236.9 259 54.1
AL4G20050 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 3.6e-60 236.1 259 54.1
Nitab4.5_0000390g0150 Nicotiana tabacum HOM05D002956 ORTHO05D009000 8.0e-60 235.0 213 56.3
ClCG02G022720 Citrullus lanatus HOM05D002956 ORTHO05D009000 9.1e-56 221.5 231 52.4
AT2G26840 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 1.7e-54 217.2 311 44.4
Sp4g08630 Schrenkiella parvula HOM05D002956 ORTHO05D009000 3.8e-54 216.1 233 54.5
Nn7g36832 Nelumbo nucifera HOM05D002956 ORTHO05D009000 7.2e-53 211.8 218 51.8
Zm00001eb128680 Zea mays HOM05D002956 ORTHO05D009000 1.6e-52 210.7 212 53.3
Os01g0268900 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D009000 3.0e-51 206.5 212 53.8
Mapoly0206s0003 Marchantia polymorpha HOM05D002956 ORTHO05D009000 6.3e-49 198.7 162 58.0
Pp3c23_20070 Physcomitrium patens HOM05D002956 ORTHO05D009000 9.2e-48 194.9 212 50.0
Duzib168G2273 Durio zibethinus HOM05D002956 ORTHO05D009000 4.5e-47 192.6 172 56.4
SMO367G0391 Selaginella moellendorffii HOM05D002956 ORTHO05D009000 4.5e-47 192.6 204 50.5
CBR_g32285 Chara braunii HOM05D002956 ORTHO05D009000 2.5e-45 186.8 184 48.9
COL.COLO4_07383 Corchorus olitorius HOM05D002956 ORTHO05D009000 1.6e-44 184.1 277 44.0
CiPaw.14G111100 Carya illinoinensis HOM05D002956 ORTHO05D009000 2.3e-35 153.7 204 45.6
AL5G21910 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 1.2e-34 151.4 170 48.2
Nitab4.5_0006687g0020 Nicotiana tabacum HOM05D002956 ORTHO05D009000 5.4e-32 142.5 91 72.5
Prupe.4G260500 Prunus persica HOM05D002956 ORTHO05D009000 2.3e-30 137.1 152 48.7
AagrBONN_evm.TU.Sc2ySwM_228.3484 Anthoceros agrestis HOM05D002956 ORTHO05D009000 3.3e-29 133.3 133 51.9
MCO16G644 Micromonas commoda HOM05D002956 ORTHO05D009000 7.5e-26 122.1 160 43.1
Nitab4.5_0006687g0010 Nicotiana tabacum HOM05D002956 ORTHO05D000001 7.5e-26 122.1 198 41.4
CiPaw.13G148600 Carya illinoinensis HOM05D002956 ORTHO05D009000 1.9e-24 117.5 227 37.0
AT3G43910 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 3.2e-24 116.7 165 44.8
Sed0027603 Sechium edule HOM05D002956 ORTHO05D009000 6.0e-23 112.5 155 41.9
Psat5g240480 Pisum sativum HOM05D002956 ORTHO05D009000 9.5e-21 105.1 129 43.4
CARHR119020 Cardamine hirsuta HOM05D002956 ORTHO05D009000 7.1e-16 89.0 155 43.9
Cre04.g218000 Chlamydomonas reinhardtii HOM05D002956 ORTHO05D009000 6.9e-11 72.4 102 38.2
PRCOL_00003518 Prasinoderma coloniale HOM05D002956 ORTHO05D009000 8.9e-11 72.0 67 52.2
CARHR035850 Cardamine hirsuta HOM05D002956 ORTHO05D009000 4.9e-09 66.2 84 47.6
CARHR035860 Cardamine hirsuta HOM05D002956 ORTHO05D009000 8.4e-09 65.5 85 43.5
vmacro04046 Vaccinium macrocarpon HOM05D002956 ORTHO05D009000 9.3e-08 62.0 127 37.8


User provided reference genes

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