Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2173 Cannabis sativa HOM05D007641 ORTHO05D007630 0.0e+00 1538.5 796 100.0
QL01p024477 Quercus lobata HOM05D007641 ORTHO05D007630 2.7e-120 437.2 797 40.7
Dinv28733 Davidia involucrata HOM05D007641 ORTHO05D007630 8.5e-98 362.5 857 37.3
RcHm_v2.0_Chr5g0073231 Rosa chinensis HOM05D007641 ORTHO05D007630 2.5e-97 360.9 835 37.2
Atru.chr10.2293 Acer truncatum HOM05D007641 ORTHO05D007630 2.6e-94 350.9 860 37.2
CiPaw.13G063300 Carya illinoinensis HOM05D007641 ORTHO05D007630 7.2e-89 332.8 783 38.6
FAN11G1956 Fragaria x ananassa HOM05D007641 ORTHO05D007630 3.1e-79 300.8 788 34.5
FvH4_3g40550 Fragaria vesca HOM05D007641 ORTHO05D007630 4.0e-79 300.4 746 35.4
FAN25G3378 Fragaria x ananassa HOM05D007641 ORTHO05D007630 1.6e-75 288.5 824 34.0
Actinidia34497 Actinidia chinensis HOM05D007641 ORTHO05D007630 1.7e-74 285.0 850 33.2
FAN16G1217 Fragaria x ananassa HOM05D007641 ORTHO05D007630 2.3e-74 284.6 746 35.0
Haze_24474 Corylus avellana HOM05D007641 ORTHO05D007630 5.2e-71 273.5 589 37.9
Prupe.6G040800 Prunus persica HOM05D007641 ORTHO05D007630 4.9e-69 266.9 829 35.1
Potri.013G157800 Populus trichocarpa HOM05D007641 ORTHO05D007630 3.6e-64 250.8 836 36.1
Sabra13G0126700 Salix brachista HOM05D007641 ORTHO05D002352 5.8e-62 243.4 820 32.4
Thecc.09G364100 Theobroma cacao HOM05D007641 ORTHO05D007630 2.1e-59 235.0 846 33.9
TWI79G1607 Tripterygium wilfordii HOM05D007641 ORTHO05D007630 1.1e-57 229.2 710 35.5
Manes.02G212232 Manihot esculenta HOM05D007641 ORTHO05D007630 2.5e-57 228.0 732 33.7
vmacro14640 Vaccinium macrocarpon HOM05D007641 ORTHO05D007630 4.6e-51 207.2 699 29.0
MELO3C019578.2 Cucumis melo HOM05D007641 ORTHO05D007630 1.3e-50 205.7 836 32.2
Duzib168G1492 Durio zibethinus HOM05D007641 ORTHO05D007630 2.3e-50 204.9 846 28.1
Aqoxy1G01263 Aquilegia oxysepala HOM05D007641 ORTHO05D007630 2.4e-47 194.9 813 29.8
Rhsim01G0243500 Rhododendron simsii HOM05D007641 ORTHO05D007630 1.3e-45 189.1 708 28.7
Nn2g10289 Nelumbo nucifera HOM05D007641 ORTHO05D007630 2.2e-45 188.3 859 27.1
Sed0007856 Sechium edule HOM05D007641 ORTHO05D007630 2.9e-45 188.0 822 31.0
Glyma.18G052000 Glycine max HOM05D007641 ORTHO05D007630 3.8e-45 187.6 837 29.5
ClCG02G019020 Citrullus lanatus HOM05D007641 ORTHO05D007630 3.3e-41 174.5 810 28.4
CsaV3_6G013130 Cucumis sativus L. HOM05D007641 ORTHO05D007630 6.2e-40 170.2 820 27.1
Psat5g147960 Pisum sativum HOM05D007641 ORTHO05D007630 5.3e-39 167.2 826 28.2
Lj6g0005873 Lotus japonicus HOM05D007641 ORTHO05D007630 6.4e-37 160.2 832 30.9
Hma1.2p1_0119F.1_g056956 Hydrangea macrophylla HOM05D007641 ORTHO05D007630 8.4e-37 159.8 499 31.1
Ciclev10004023m.g Citrus clementina HOM05D007641 ORTHO05D007630 3.2e-36 157.9 364 36.0
arahy.Tifrunner.gnm1.ann1.4PHV2I Arachis hypogaea HOM05D007641 ORTHO05D007630 7.1e-36 156.8 785 27.0
Phvul.006G079400 Phaseolus vulgaris HOM05D007641 ORTHO05D007630 6.0e-35 153.7 838 26.8
Lalb_Chr18g0054201 Lupinus albus HOM05D007641 ORTHO05D007630 1.0e-34 152.9 744 28.1
Sc23g0005090 Simmondsia chinensis HOM05D007641 ORTHO05D007630 6.7e-34 150.2 745 31.1
TPR.G13882 Trifolium pratense HOM05D007641 ORTHO05D007630 3.7e-32 144.4 774 27.1
VMungo0540G0343 Vigna mungo HOM05D007641 ORTHO05D007630 8.1e-32 143.3 805 26.6
GSVIVG01024555001 Vitis vinifera HOM05D007641 ORTHO05D007630 2.4e-31 141.7 217 47.9
Migut.D00817 Erythranthe guttata HOM05D007641 ORTHO05D007630 1.3e-29 136.0 484 33.7
Gohir.A08G000032 Gossypium hirsutum HOM05D007641 ORTHO05D007630 2.2e-29 135.2 769 27.0
HanXRQChr08g0230341 Helianthus annuus HOM05D007641 ORTHO05D007630 6.4e-29 133.7 432 30.8
THA.LOC104815825 Tarenaya hassleriana HOM05D001940 ORTHO05D007630 4.2e-28 131.0 832 27.5
Medtr3g467390 Medicago truncatula HOM05D007641 ORTHO05D007630 5.5e-28 130.6 700 28.4
COL.COLO4_11217 Corchorus olitorius HOM05D007641 ORTHO05D007630 9.3e-28 129.8 664 26.1
Peaxi162Scf00605g00515 Petunia axillaris HOM05D014625 ORTHO05D007630 1.2e-27 129.4 844 25.9
TAR636G3352 Trochodendron aralioides HOM05D007641 ORTHO05D007630 1.0e-26 126.3 351 32.2
Solyc09g005140.2 Solanum lycopersicum HOM05D014625 ORTHO05D007630 3.9e-26 124.4 874 26.5
Sopen09g001120 Solanum pennellii HOM05D014625 ORTHO05D007630 6.7e-26 123.6 874 26.5
Cpa.g.sc2.293 Carica papaya HOM05D007641 ORTHO05D007630 2.5e-25 121.7 369 32.2
Sp4g13010 Schrenkiella parvula HOM05D001940 ORTHO05D007630 4.3e-25 120.9 731 26.4
arahy.Tifrunner.gnm1.ann1.F8RHVN Arachis hypogaea HOM05D007641 ORTHO05D007630 2.1e-24 118.6 640 26.9
Nitab4.5_0001868g0030 Nicotiana tabacum HOM05D014625 ORTHO05D007630 3.7e-24 117.9 216 39.8
PSO170G4823 Papaver somniferum HOM05D007641 ORTHO05D007630 3.7e-24 117.9 385 31.2
MBI15_g36478_MAGBIO Magnolia biondii HOM05D007641 ORTHO05D007630 8.2e-24 116.7 701 26.4
Gorai.004G000600 Gossypium raimondii HOM05D007641 ORTHO05D007630 4.0e-23 114.4 773 25.0
AT2G30480 Arabidopsis thaliana HOM05D001940 ORTHO05D007630 4.5e-22 110.9 650 27.7
AL4G25360 Arabidopsis lyrata HOM05D001940 ORTHO05D007630 2.2e-21 108.6 703 27.9
Lsat_1_v5_gn_9_13760 Lactuca sativa HOM05D007641 ORTHO05D007630 4.9e-21 107.5 329 34.3
Carub.0004s1164 Capsella rubella HOM05D001940 ORTHO05D007630 6.5e-21 107.1 694 24.9
TAR633G1590 Trochodendron aralioides HOM05D007641 ORTHO05D007630 1.4e-20 105.9 321 32.4
PSO017G1347 Papaver somniferum HOM05D007641 ORTHO05D007630 4.2e-20 104.4 383 33.2
Gohir.D12G000401 Gossypium hirsutum HOM05D007641 ORTHO05D007630 1.6e-19 102.4 672 25.7
ECA247G3209 Erigeron canadensis HOM05D007641 ORTHO05D007630 2.1e-19 102.1 623 26.8
Hund18459 Selenicereus undatus HOM05D029401 ORTHO05D007630 6.1e-19 100.5 840 26.5
BcaC02g11137 Brassica carinata HOM05D001940 ORTHO05D007630 1.3e-18 99.4 510 27.6
Gohir.D08G007350 Gossypium hirsutum HOM05D007641 ORTHO05D007630 2.3e-18 98.6 766 24.3
BcaB02g10326 Brassica carinata HOM05D001940 ORTHO05D007630 2.5e-17 95.1 405 25.9
BolC4t23545H Brassica oleracea HOM05D001940 ORTHO05D007630 5.7e-17 94.0 253 38.3
SGA_v2.0_scaffold20G09288 Striga asiatica HOM05D007641 ORTHO05D007630 7.4e-17 93.6 388 28.6
Nitab4.5_0000002g0280 Nicotiana tabacum HOM05D014625 ORTHO05D007630 9.7e-17 93.2 542 25.6
A05p14980 Brassica napus HOM05D001940 ORTHO05D007630 5.3e-15 87.4 505 27.5
BraA05t20424Z Brassica rapa HOM05D001940 ORTHO05D007630 6.9e-15 87.0 255 39.6
MD11G1053300 Malus domestica HOM05D007641 ORTHO05D007630 6.9e-15 87.0 296 34.8
Oeu064683.1 Olea europaea HOM05D007641 ORTHO05D007630 9.0e-15 86.7 412 27.7
Ca_15061_v3 Cicer arietinum L. HOM05D007641 ORTHO05D007630 1.5e-14 85.9 302 28.8
DCAR_018642 Daucus carota HOM05D007641 ORTHO05D007630 2.0e-14 85.5 119 45.4
Ciclev10001550m.g Citrus clementina HOM05D007641 ORTHO05D007630 7.7e-14 83.6 362 29.3
Gorai.012G000300 Gossypium raimondii HOM05D007641 ORTHO05D007630 8.5e-13 80.1 545 26.1
PGR102G3245 Punica granatum HOM05D007641 ORTHO05D007630 2.5e-12 78.6 194 34.0
HPP92_015425 Vanilla planifolia HOM05D007641 ORTHO05D007630 2.5e-12 78.6 277 31.4
ATR1127G234 Amborella trichopoda HOM05D007641 ORTHO05D007630 3.2e-12 78.2 220 30.5
CARHR123930 Cardamine hirsuta HOM05D001940 ORTHO05D007630 3.2e-12 78.2 135 37.0
Gohir.1Z049529 Gossypium hirsutum HOM05D007641 ORTHO05D007630 7.2e-12 77.0 465 26.2
PSO384G0550 Papaver somniferum HOM05D007641 ORTHO05D007630 9.4e-12 76.6 78 53.8
Os01g0167700 Oryza sativa ssp. japonica HOM05D052079 ORTHO05D007630 1.2e-11 76.3 475 24.0
C04p20070 Brassica napus HOM05D001940 ORTHO05D007630 1.4e-10 72.8 594 25.3
AUR62016518 Chenopodium quinoa HOM05D029401 ORTHO05D007630 1.4e-10 72.8 665 22.4
Thhalv10017756m.g Eutrema salsugineum HOM05D001940 ORTHO05D007630 5.1e-10 70.9 369 26.0
FAN21G1070 Fragaria x ananassa HOM05D007641 ORTHO05D007630 5.1e-10 70.9 325 28.3
AUR62001158 Chenopodium quinoa HOM05D029401 ORTHO05D007630 1.5e-09 69.3 713 23.0
Ah.08g218910 Amaranthus hybridus HOM05D000020 ORTHO05D002192 5.7e-09 67.4 458 24.0
Ca_15060_v3 Cicer arietinum L. HOM05D007641 ORTHO05D007630 1.3e-08 66.2 515 26.0
Glyma.11G198150 Glycine max HOM05D007641 ORTHO05D007630 1.3e-08 66.2 177 33.3
TAR636G0755 Trochodendron aralioides HOM05D007641 ORTHO05D007630 3.7e-08 64.7 175 37.7
MD11G1053200 Malus domestica HOM05D007641 ORTHO05D007630 1.4e-07 62.8 138 33.3
Gorai.002G184200 Gossypium raimondii HOM05D007641 ORTHO05D007630 3.1e-07 61.6 183 29.5
MD11G1053100 Malus domestica HOM05D007641 ORTHO05D022110 9.1e-07 60.1 80 71.2
Zm00001eb336420 Zea mays HOM05D052079 ORTHO05D007630 9.1e-07 60.1 476 23.3


User provided reference genes

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