Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 6.6e-176 620.5 303 100.0
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 2.8e-126 455.7 289 74.0
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 1.5e-124 449.9 300 71.0
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 1.5e-124 449.9 288 74.7
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 7.7e-124 447.6 303 70.3
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 7.7e-124 447.6 300 71.7
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 1.7e-123 446.4 294 72.1
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 2.9e-123 445.7 287 72.1
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 2.9e-123 445.7 290 72.8
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 5.0e-123 444.9 294 71.8
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 5.0e-123 444.9 298 72.5
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 5.0e-123 444.9 289 72.0
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 6.5e-123 444.5 300 71.7
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 1.1e-122 443.7 290 72.4
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 1.1e-122 443.7 297 72.1
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 1.9e-122 443.0 304 70.7
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.5e-122 442.6 294 71.4
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 4.2e-122 441.8 287 71.8
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 1.2e-121 440.3 286 72.7
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 1.2e-121 440.3 284 71.8
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 4.7e-121 438.3 284 73.2
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 6.1e-121 438.0 290 71.4
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 2.3e-120 436.0 302 69.9
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 1.1e-119 433.7 301 69.4
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 1.5e-119 433.3 301 68.4
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.5e-119 433.3 321 66.4
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 1.5e-119 433.3 299 70.6
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 4.4e-119 431.8 300 69.7
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 5.7e-119 431.4 300 68.3
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 9.7e-119 430.6 299 67.9
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 8.2e-118 427.6 292 68.2
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 2.4e-117 426.0 293 68.6
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 4.1e-117 425.2 290 70.0
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 1.2e-116 423.7 284 69.7
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 1.2e-116 423.7 284 71.1
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 2.0e-116 422.9 318 65.1
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 2.6e-116 422.5 287 69.0
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 2.6e-116 422.5 284 70.4
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 1.3e-115 420.2 286 69.6
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 3.8e-115 418.7 284 69.7
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 5.0e-115 418.3 285 68.4
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 5.0e-115 418.3 286 70.6
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 6.5e-115 417.9 300 68.3
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 8.5e-115 417.5 298 68.5
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 1.5e-114 416.8 285 68.4
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 1.5e-114 416.8 286 69.9
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 1.5e-114 416.8 286 69.6
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 1.9e-114 416.4 286 69.9
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 3.2e-114 415.6 285 68.8
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 5.5e-114 414.8 286 69.2
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 5.5e-114 414.8 285 68.1
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 7.2e-114 414.5 283 68.2
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 1.2e-113 413.7 294 66.7
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 1.6e-113 413.3 342 59.9
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 8.0e-113 411.0 303 65.0
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 2.3e-112 409.5 286 67.8
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 8.8e-112 407.5 324 63.6
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 2.0e-111 406.4 290 65.9
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 2.6e-111 406.0 286 67.5
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 2.6e-111 406.0 289 68.2
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 3.3e-111 405.6 286 65.7
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 4.4e-111 405.2 282 69.9
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 4.4e-111 405.2 286 69.2
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 1.3e-110 403.7 286 67.1
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 1.3e-110 403.7 286 67.1
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 1.7e-110 403.3 286 65.7
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 2.8e-110 402.5 289 66.1
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 3.7e-110 402.1 286 67.1
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 4.8e-110 401.7 286 66.8
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 3.1e-109 399.1 286 66.4
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 3.1e-109 399.1 286 66.4
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 1.2e-108 397.1 287 65.9
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 2.7e-108 396.0 287 65.9
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 5.9e-108 394.8 286 67.5
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 3.8e-107 392.1 302 63.6
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 5.0e-107 391.7 283 65.4
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 8.5e-107 391.0 286 65.0
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 7.2e-106 387.9 300 64.3
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 6.1e-105 384.8 297 59.9
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.4e-104 383.6 294 65.6
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 1.8e-104 383.3 307 62.9
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 4.0e-104 382.1 374 52.7
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 1.3e-102 377.1 256 69.5
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.0e-100 369.8 290 62.8
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 3.5e-100 369.0 288 62.2
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.3e-99 367.1 251 70.5
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 1.2e-97 360.5 288 63.9
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 1.4e-96 357.1 301 59.1
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 9.2e-93 344.4 290 58.3
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 1.0e-91 340.9 289 59.5
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 1.9e-90 336.7 218 73.9
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 2.5e-90 336.3 228 71.5
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 3.0e-88 329.3 287 58.5
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.7e-86 323.6 304 54.3
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 4.1e-85 318.9 271 58.7
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 3.5e-84 315.8 251 60.6
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 5.0e-83 312.0 459 43.1
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 9.5e-82 307.8 293 52.6
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 9.5e-82 307.8 278 54.0
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 3.1e-80 302.8 285 53.7
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 6.8e-80 301.6 205 69.3
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 5.2e-72 275.4 180 71.1
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 5.8e-71 271.9 289 50.2
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 7.8e-68 261.5 186 67.2
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 1.6e-65 253.8 352 41.5
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.8e-64 250.4 283 47.3
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 9.3e-53 211.5 173 57.8
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 6.6e-51 205.3 199 51.8
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 2.5e-50 203.4 166 57.2
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.4e-37 161.0 143 57.3
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 1.9e-37 160.6 121 64.5
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 4.0e-32 142.9 120 58.3
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 3.8e-30 136.3 204 41.2
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 1.6e-25 120.9 265 29.4
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 5.3e-24 115.9 256 30.5
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 8.5e-22 108.6 91 59.3
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 1.7e-17 94.4 60 71.7
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 5.3e-16 89.4 67 56.7
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.9e-13 80.9 57 68.4
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 2.4e-08 63.9 52 59.6


User provided reference genes

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