Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2113 Cannabis sativa HOM05D003812 ORTHO05D004393 0.0e+00 1132.5 589 100.0
Prupe.7G062100 Prunus persica HOM05D003812 ORTHO05D004393 4.4e-192 675.2 594 59.8
MD15G1143400 Malus domestica HOM05D003812 ORTHO05D004393 4.6e-189 665.2 600 58.0
FvH4_4g37371 Fragaria vesca HOM05D003812 ORTHO05D004393 4.6e-181 638.6 597 57.1
Cfa008512 Carpinus fangiana HOM05D003812 ORTHO05D004393 1.4e-174 617.1 595 56.1
Lj2g0024194 Lotus japonicus HOM05D003812 ORTHO05D004393 1.9e-174 616.7 600 56.7
Thecc.03G204100 Theobroma cacao HOM05D003812 ORTHO05D004393 4.1e-174 615.5 592 55.6
QL10p064313 Quercus lobata HOM05D003812 ORTHO05D004393 1.0e-172 610.9 594 55.2
CSS0041441 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 2.3e-172 609.8 603 57.7
Lj2g0003816 Lotus japonicus HOM05D003812 ORTHO05D004393 3.9e-172 609.0 610 55.7
Ca_17095_v3 Cicer arietinum L. HOM05D003812 ORTHO05D004393 1.8e-169 600.1 588 57.8
FvH4_1g00230 Fragaria vesca HOM05D003812 ORTHO05D004393 5.8e-168 595.1 595 54.3
Gorai.004G122600 Gossypium raimondii HOM05D003812 ORTHO05D004393 2.2e-167 593.2 590 54.9
VMungo1215G0546 Vigna mungo HOM05D003812 ORTHO05D004393 2.2e-167 593.2 610 52.5
Atru.chr3.1997_Atru.chr3.1998 Acer truncatum HOM05D003812 ORTHO05D004393 1.9e-166 590.1 600 53.3
Glyma.11G082800 Glycine max HOM05D003812 ORTHO05D004393 7.1e-166 588.2 591 56.0
GSVIVG01038248001 Vitis vinifera HOM05D003812 ORTHO05D004393 7.1e-166 588.2 632 53.8
Gohir.D08G113808 Gossypium hirsutum HOM05D003812 ORTHO05D004393 1.2e-165 587.4 596 54.2
Gohir.A08G102525 Gossypium hirsutum HOM05D003812 ORTHO05D004393 4.6e-165 585.5 590 52.9
Manes.01G010200 Manihot esculenta HOM05D003812 ORTHO05D004393 6.0e-165 585.1 606 54.0
Cpa.g.sc151.5 Carica papaya HOM05D003812 ORTHO05D004393 5.1e-164 582.0 604 52.6
Ciclev10027241m.g Citrus clementina HOM05D003812 ORTHO05D004393 8.7e-164 581.3 606 55.4
Actinidia18400 Actinidia chinensis HOM05D003812 ORTHO05D004393 1.1e-163 580.9 594 54.4
TAR362G0390 Trochodendron aralioides HOM05D003812 ORTHO05D004393 1.1e-163 580.9 630 54.6
TWI63G1503 Tripterygium wilfordii HOM05D003812 ORTHO05D004393 1.2e-162 577.4 596 54.0
Phvul.002G113100 Phaseolus vulgaris HOM05D003812 ORTHO05D004393 2.6e-160 569.7 588 52.0
Psat3g143480 Pisum sativum HOM05D003812 ORTHO05D004393 2.2e-159 566.6 591 56.2
FAN26G2119 Fragaria x ananassa HOM05D003812 ORTHO05D004393 1.1e-158 564.3 617 51.7
arahy.Tifrunner.gnm1.ann1.SFVM41 Arachis hypogaea HOM05D003812 ORTHO05D004393 1.7e-156 557.0 590 51.0
COL.COLO4_16818 Corchorus olitorius HOM05D003812 ORTHO05D004393 8.7e-156 554.7 670 46.9
TPR.G11261 Trifolium pratense HOM05D003812 ORTHO05D004393 7.3e-155 551.6 599 53.4
arahy.Tifrunner.gnm1.ann1.U9V8RX Arachis hypogaea HOM05D003812 ORTHO05D004393 9.6e-155 551.2 596 50.5
ClCG09G014660 Citrullus lanatus HOM05D003812 ORTHO05D004393 1.6e-154 550.4 593 51.3
TPR.G23263 Trifolium pratense HOM05D003812 ORTHO05D004393 1.1e-153 547.7 602 53.0
MELO3C026683.2 Cucumis melo HOM05D003812 ORTHO05D004393 1.8e-153 547.0 590 50.5
CsaV3_5G037130 Cucumis sativus L. HOM05D003812 ORTHO05D004393 1.8e-153 547.0 595 50.8
Medtr7g059160 Medicago truncatula HOM05D003812 ORTHO05D004393 3.1e-153 546.2 614 52.4
arahy.Tifrunner.gnm1.ann1.B1HR4A Arachis hypogaea HOM05D003812 ORTHO05D004393 5.3e-153 545.4 626 52.4
arahy.Tifrunner.gnm1.ann1.CNXN93 Arachis hypogaea HOM05D003812 ORTHO05D004393 5.3e-153 545.4 626 52.4
Sed0027703 Sechium edule HOM05D003812 ORTHO05D004393 5.8e-152 542.0 578 50.0
AT3G49410 Arabidopsis thaliana HOM05D003812 ORTHO05D004393 9.9e-152 541.2 588 51.5
MSTRG.26255 Avicennia marina HOM05D003812 ORTHO05D004393 1.7e-151 540.4 615 50.6
Sp2g22880 Schrenkiella parvula HOM05D003812 ORTHO05D004393 2.4e-150 536.6 584 52.1
Migut.K00296 Erythranthe guttata HOM05D003812 ORTHO05D004393 6.0e-149 531.9 624 51.6
AL5G29170 Arabidopsis lyrata HOM05D003812 ORTHO05D004393 1.0e-148 531.2 589 50.6
CARHR158380 Cardamine hirsuta HOM05D003812 ORTHO05D004393 1.8e-148 530.4 588 49.7
Aqoxy7G02949 Aquilegia oxysepala HOM05D003812 ORTHO05D004393 3.0e-148 529.6 631 49.9
FAN07G0162 Fragaria x ananassa HOM05D004444 ORTHO05D005246 3.9e-148 529.3 508 55.7
AT5G24450 Arabidopsis thaliana HOM05D003812 ORTHO05D004393 2.5e-147 526.6 602 47.7
AL6G36030 Arabidopsis lyrata HOM05D003812 ORTHO05D004393 4.3e-147 525.8 582 50.5
Carub.0006s2228 Capsella rubella HOM05D003812 ORTHO05D004393 4.3e-147 525.8 576 48.6
THA.LOC104814949 Tarenaya hassleriana HOM05D003812 ORTHO05D004393 5.6e-147 525.4 611 46.6
Lsat_1_v5_gn_8_131861 Lactuca sativa HOM05D003812 ORTHO05D004393 7.4e-147 525.0 587 49.6
BolC1t03017H Brassica oleracea HOM05D003812 ORTHO05D004393 1.3e-146 524.2 607 48.1
Sp5g12660 Schrenkiella parvula HOM05D003812 ORTHO05D004393 1.3e-146 524.2 588 50.0
CARHR188960 Cardamine hirsuta HOM05D003812 ORTHO05D004393 2.1e-146 523.5 580 48.1
FAN07G2723 Fragaria x ananassa HOM05D003812 ORTHO05D004393 1.1e-145 521.2 529 53.3
Thhalv10003925m.g Eutrema salsugineum HOM05D003812 ORTHO05D004393 2.4e-145 520.0 582 49.3
C01p30850 Brassica napus HOM05D003812 ORTHO05D004393 3.1e-145 519.6 596 48.5
BraA01t02385Z Brassica rapa HOM05D003812 ORTHO05D004393 3.4e-144 516.2 605 47.3
A01p24730 Brassica napus HOM05D003812 ORTHO05D004393 4.5e-144 515.8 605 47.1
BcaB07g29910 Brassica carinata HOM05D003812 ORTHO05D004393 1.7e-143 513.8 597 47.2
PGR142G2470 Punica granatum HOM05D003812 ORTHO05D004393 2.9e-143 513.1 604 50.2
PSO170G6215 Papaver somniferum HOM05D003812 ORTHO05D004393 8.4e-143 511.5 613 48.8
Potri.017G007200 Populus trichocarpa HOM05D003812 ORTHO05D004393 3.2e-142 509.6 605 47.4
Aa31LG11G3700 Aethionema arabicum HOM05D003812 ORTHO05D004393 4.6e-141 505.8 582 50.0
Aqoxy4G02750 Aquilegia oxysepala HOM05D003812 ORTHO05D004393 2.3e-140 503.4 664 47.4
A02p40330 Brassica napus HOM05D003812 ORTHO05D004393 8.7e-140 501.5 590 49.3
FAN17G2490 Fragaria x ananassa HOM05D004444 ORTHO05D005246 1.9e-139 500.4 507 54.0
Thhalv10010256m.g Eutrema salsugineum HOM05D003812 ORTHO05D004393 3.3e-139 499.6 591 49.6
Sc25g0002340 Simmondsia chinensis HOM05D003812 ORTHO05D004393 4.3e-139 499.2 467 55.5
BolC2t12085H Brassica oleracea HOM05D003812 ORTHO05D004393 4.0e-137 492.7 597 48.1
DCAR_023841 Daucus carota HOM05D003812 ORTHO05D004393 1.2e-136 491.1 610 48.0
Sopen12g006540 Solanum pennellii HOM05D003812 ORTHO05D004393 2.6e-136 490.0 631 47.9
C02p60290 Brassica napus HOM05D003812 ORTHO05D004393 2.2e-135 486.9 588 48.5
Sabra17G0008000 Salix brachista HOM05D003812 ORTHO05D004393 2.2e-135 486.9 660 45.0
HanXRQChr05g0135721 Helianthus annuus HOM05D003812 ORTHO05D004393 3.2e-134 483.0 591 47.2
BraA02t09001Z Brassica rapa HOM05D003812 ORTHO05D004393 9.3e-134 481.5 593 48.1
BcaC03g17974 Brassica carinata HOM05D003812 ORTHO05D004393 1.2e-133 481.1 593 47.9
CiPaw.01G201400 Carya illinoinensis HOM05D003812 ORTHO05D004393 3.5e-133 479.6 442 59.7
Nitab4.5_0010162g0010 Nicotiana tabacum HOM05D003812 ORTHO05D004393 1.8e-132 477.2 482 52.7
SalBow5G1547 Salvia bowleyana HOM05D003812 ORTHO05D004393 2.3e-132 476.9 622 46.5
BcaC09g49951 Brassica carinata HOM05D003812 ORTHO05D004393 3.0e-132 476.5 597 46.4
SalBow5G1511 Salvia bowleyana HOM05D003812 ORTHO05D004393 5.1e-132 475.7 629 46.3
SGA_v2.0_scaffold12G06029 Striga asiatica HOM05D003812 ORTHO05D004393 1.9e-131 473.8 669 45.9
BcaB05g23118 Brassica carinata HOM05D003812 ORTHO05D004393 5.7e-131 472.2 599 46.7
CAN.G164.18 Capsicum annuum HOM05D003812 ORTHO05D004393 3.7e-130 469.5 609 45.3
ECA246G4500 Erigeron canadensis HOM05D003812 ORTHO05D004393 3.1e-129 466.5 589 44.3
Nn1g08169 Nelumbo nucifera HOM05D003812 ORTHO05D004393 7.7e-128 461.8 426 54.5
Potri.007G145000 Populus trichocarpa HOM05D003812 ORTHO05D004393 6.5e-127 458.8 510 49.0
Rhsim09G0003800 Rhododendron simsii HOM05D003812 ORTHO05D004393 1.6e-125 454.1 608 44.7
BcaC03g17970 Brassica carinata HOM05D003812 ORTHO05D004393 3.6e-125 453.0 584 45.9
Solyc12g011180.3 Solanum lycopersicum HOM05D003812 ORTHO05D004393 1.2e-120 438.0 490 49.4
Nitab4.5_0003520g0020 Nicotiana tabacum HOM05D003812 ORTHO05D004393 5.7e-115 419.1 489 49.5
Lj4C178G3 Lonicera japonica HOM05D003812 ORTHO05D004393 2.4e-113 413.7 622 41.5
unitig_37.g12590 Utricularia gibba HOM05D003812 ORTHO05D004393 2.4e-113 413.7 592 43.4
EL10Ac3g06164 Beta vulgaris HOM05D003812 ORTHO05D004393 5.9e-112 409.1 587 44.8
Peaxi162Scf00463g00428 Petunia axillaris HOM05D003812 ORTHO05D004393 1.1e-110 404.8 498 47.4
RcHm_v2.0_Chr2g0084521 Rosa chinensis HOM05D003812 ORTHO05D004393 1.1e-105 388.3 338 59.2
vmacro06691 Vaccinium macrocarpon HOM05D003812 ORTHO05D004393 5.3e-105 386.0 502 44.6
Aa31LG4G17960 Aethionema arabicum HOM05D003812 ORTHO05D004393 2.2e-103 380.6 608 41.4
BcaB07g31049 Brassica carinata HOM05D003812 ORTHO05D004393 7.2e-102 375.6 370 51.9
FAN23G1808 Fragaria x ananassa HOM05D003812 ORTHO05D004393 4.7e-101 372.9 349 56.4
HPP92_018576 Vanilla planifolia HOM05D003812 ORTHO05D004393 4.4e-99 366.3 608 41.4
Zm00001eb420200 Zea mays HOM05D003812 ORTHO05D004393 1.1e-97 361.7 595 39.8
Cc00_g24630 Coffea canephora HOM05D003812 ORTHO05D004393 1.1e-94 351.7 356 52.0
AUR62023711 Chenopodium quinoa HOM05D003812 ORTHO05D004393 2.7e-93 347.1 496 44.6
MBI16_g29049_MAGBIO Magnolia biondii HOM05D003812 ORTHO05D004393 2.3e-92 344.0 507 46.7
Pp3c16_3240 Physcomitrium patens HOM05D003812 ORTHO05D004393 2.3e-92 344.0 441 42.0
CDE05G0093 Ceratophyllum demersum HOM05D003812 ORTHO05D004393 7.5e-91 339.0 660 37.0
Mapoly0019s0182 Marchantia polymorpha HOM05D003812 ORTHO05D004393 8.3e-90 335.5 435 39.5
Nitab4.5_0000160g0140 Nicotiana tabacum HOM05D003812 ORTHO05D004393 1.2e-88 331.6 354 52.5
SMO367G0920 Selaginella moellendorffii HOM05D003812 ORTHO05D004393 8.0e-85 318.9 461 38.8
Lalb_Chr05g0212031 Lupinus albus HOM05D003812 ORTHO05D004393 2.2e-82 310.8 319 55.2
AagrBONN_evm.TU.Sc2ySwM_344.3654 Anthoceros agrestis HOM05D003812 ORTHO05D004393 9.2e-81 305.4 476 37.6
AUR62002481 Chenopodium quinoa HOM05D003812 ORTHO05D004393 5.2e-76 289.7 343 49.3
Hma1.2p1_0381F.1_g140050 Hydrangea macrophylla HOM05D003812 ORTHO05D004393 1.2e-69 268.5 251 55.0
TAR636G0947 Trochodendron aralioides HOM05D003812 ORTHO05D004393 4.0e-68 263.5 267 54.7
Ah.13g073180 Amaranthus hybridus HOM05D003812 ORTHO05D004393 3.4e-67 260.4 269 50.9
RcHm_v2.0_Chr2g0084531 Rosa chinensis HOM05D003812 ORTHO05D004393 9.8e-67 258.8 283 50.9
Lalb_Chr05g0212041 Lupinus albus HOM05D003812 ORTHO05D004393 6.4e-66 256.1 252 54.4
Haze_11132 Corylus avellana HOM05D003812 ORTHO05D004393 3.2e-65 253.8 341 46.3
Carub.0005s1565 Capsella rubella HOM05D003812 ORTHO05D004393 2.7e-64 250.8 284 52.1
BolC2t12088H Brassica oleracea HOM05D003812 ORTHO05D004393 2.1e-61 241.1 320 41.9
BcaB01g00718 Brassica carinata HOM05D003812 ORTHO05D004393 2.8e-61 240.7 316 44.3
Hund12300 Selenicereus undatus HOM05D003812 ORTHO05D004393 1.5e-59 235.0 237 54.0
Sc13g0007550 Simmondsia chinensis HOM05D003812 ORTHO05D004393 8.3e-58 229.2 253 47.4
Carub.0005s1566 Capsella rubella HOM05D003812 ORTHO05D004393 7.1e-57 226.1 251 46.6
Cc06_g19250 Coffea canephora HOM05D003812 ORTHO05D004393 7.8e-56 222.6 247 49.0
Cc06_g19240 Coffea canephora HOM05D003812 ORTHO05D004393 2.4e-52 211.1 132 72.0
Hma1.2p1_0381F.1_g140060 Hydrangea macrophylla HOM05D003812 ORTHO05D004393 2.0e-51 208.0 158 63.9
TAR636G0254 Trochodendron aralioides HOM05D003812 ORTHO05D004393 1.7e-47 194.9 267 51.7
ATR0580G406 Amborella trichopoda HOM05D003812 ORTHO05D004393 6.4e-42 176.4 237 44.3
Oeu064436.1 Olea europaea HOM05D003812 ORTHO05D004393 3.5e-40 170.6 181 50.3
CSS0023461 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 2.3e-39 167.9 181 50.8
CSS0048962 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 2.5e-38 164.5 181 50.3
Ah.13g073190 Amaranthus hybridus HOM05D003812 ORTHO05D004393 5.6e-38 163.3 169 50.9
CBR_g26464 Chara braunii HOM05D003812 ORTHO05D004393 1.3e-37 162.2 623 24.2
HanXRQChr17g0553321 Helianthus annuus HOM05D003812 ORTHO05D004393 1.6e-37 161.8 245 45.7
CSS0001518 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 2.1e-37 161.4 181 49.2
Nitab4.5_0001168g0120 Nicotiana tabacum HOM05D003812 ORTHO05D004393 2.8e-37 161.0 353 32.9
CSS0030669 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 8.1e-37 159.5 169 52.1
CSS0002491 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 1.1e-36 159.1 181 49.2
CSS0006626 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 1.1e-36 159.1 181 49.2
CSS0008525 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 1.1e-36 159.1 181 49.2
Oeu022463.3 Olea europaea HOM05D003812 ORTHO05D004393 9.0e-36 156.0 396 33.6
VMungo0251G1870 Vigna mungo HOM05D000140 ORTHO05D004393 1.7e-34 151.8 202 42.6
arahy.Tifrunner.gnm1.ann1.NBB910 Arachis hypogaea HOM05D003812 ORTHO05D004393 9.0e-28 129.4 103 60.2
SEGI_23375 Sequoiadendron giganteum HOM05D003812 ORTHO05D004393 1.2e-27 129.0 184 44.0
SHI01261 Sapria himalayana HOM05D003812 ORTHO05D004393 4.5e-27 127.1 152 44.7
arahy.Tifrunner.gnm1.ann1.WBRQ5K Arachis hypogaea HOM05D003812 ORTHO05D004393 5.8e-27 126.7 103 59.2
VMungo1268G0001 Vigna mungo HOM05D003812 ORTHO05D004393 2.2e-26 124.8 192 40.6
arahy.Tifrunner.gnm1.ann1.C22IND Arachis hypogaea HOM05D003812 ORTHO05D004393 4.9e-26 123.6 98 59.2
Sc13g0007560 Simmondsia chinensis HOM05D003812 ORTHO05D004393 8.4e-26 122.9 117 54.7
Hund12301 Selenicereus undatus HOM05D003812 ORTHO05D004393 5.5e-25 120.2 237 42.6
Haze_11133 Corylus avellana HOM05D003812 ORTHO05D004393 4.6e-24 117.1 139 46.8
CSS0036967 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 3.0e-23 114.4 172 41.3
ATR0580G030 Amborella trichopoda HOM05D003812 ORTHO05D004393 3.3e-22 110.9 268 32.1
arahy.Tifrunner.gnm1.ann1.05VQ85 Arachis hypogaea HOM05D003812 ORTHO05D004393 6.9e-20 103.2 113 47.8
Os01g0528000 Oryza sativa ssp. japonica HOM05D003812 ORTHO05D004393 5.8e-19 100.1 158 39.9
arahy.Tifrunner.gnm1.ann1.8MB3N8 Arachis hypogaea HOM05D003812 ORTHO05D004393 9.3e-17 92.8 83 55.4
Nn1g08161 Nelumbo nucifera HOM05D003812 ORTHO05D004393 6.1e-16 90.1 206 44.7
arahy.Tifrunner.gnm1.ann1.SF8VIF Arachis hypogaea HOM05D003812 ORTHO05D004393 1.3e-15 89.0 79 54.4
SEGI_01468 Sequoiadendron giganteum HOM05D003812 ORTHO05D004393 2.3e-15 88.2 69 56.5
FAN20G1426 Fragaria x ananassa HOM05D003812 ORTHO05D004393 7.7e-11 73.2 124 40.3
vmacro06690 Vaccinium macrocarpon HOM05D003812 ORTHO05D004393 2.9e-10 71.2 60 56.7
FvH4_2g23680 Fragaria vesca HOM05D003812 ORTHO05D004393 1.4e-09 68.9 126 39.7
Hund12275 Selenicereus undatus HOM05D003812 ORTHO05D004393 5.5e-09 67.0 199 35.7
MBI16_g46635_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 9.4e-09 66.2 280 33.9
SEGI_03594 Sequoiadendron giganteum HOM05D003812 ORTHO05D004393 3.6e-08 64.3 43 69.8
Hma1.2p1_0381F.1_g140070 Hydrangea macrophylla HOM05D003812 ORTHO05D004393 1.4e-07 62.4 170 31.8
BolC8t48198H Brassica oleracea HOM05D003812 ORTHO05D004393 3.0e-07 61.2 38 71.1
Cfa023757 Carpinus fangiana HOM05D003979 ORTHO05D005530 8.8e-07 59.7 399 23.1
FAN15G1786 Fragaria x ananassa HOM05D003812 ORTHO05D004393 7.4e-06 56.6 37 62.2


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