Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 1.4e-30 135.6 65 100.0
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 3.7e-23 110.9 62 82.3
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 3.7e-23 110.9 62 82.3
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 6.2e-23 110.2 62 80.6
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 6.2e-23 110.2 62 80.6
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 1.1e-22 109.4 62 80.6
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 1.4e-22 109.0 62 80.6
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 2.4e-22 108.2 62 80.6
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 5.3e-22 107.1 62 79.0
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 5.3e-22 107.1 62 79.0
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 5.3e-22 107.1 62 79.0
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 5.3e-22 107.1 65 76.9
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 5.3e-22 107.1 62 80.6
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 5.3e-22 107.1 62 79.0
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 9.0e-22 106.3 62 79.0
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 2.0e-21 105.1 65 78.5
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 2.0e-21 105.1 62 79.0
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 2.6e-21 104.8 60 80.0
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 5.8e-21 103.6 62 75.8
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 7.6e-21 103.2 61 77.0
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 1.0e-20 102.8 65 73.8
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 1.0e-20 102.8 65 76.9
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 1.7e-20 102.1 62 75.8
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 2.2e-20 101.7 62 77.4
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 2.9e-20 101.3 62 75.8
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 2.9e-20 101.3 62 77.4
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 3.8e-20 100.9 61 75.4
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 4.9e-20 100.5 61 73.8
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 4.9e-20 100.5 61 73.8
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 4.9e-20 100.5 62 77.4
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 6.5e-20 100.1 61 75.4
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 6.5e-20 100.1 61 75.4
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 1.1e-19 99.4 62 72.6
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 1.1e-19 99.4 61 72.1
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 1.4e-19 99.0 61 72.1
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 4.2e-19 97.4 61 70.5
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 4.2e-19 97.4 64 73.4
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 7.1e-19 96.7 56 78.6
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 9.3e-19 96.3 57 75.4
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 1.2e-18 95.9 59 76.3
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 1.6e-18 95.5 62 71.0
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 1.6e-18 95.5 62 71.0
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 1.6e-18 95.5 61 70.5
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 2.1e-18 95.1 62 72.6
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 2.1e-18 95.1 64 68.8
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 2.1e-18 95.1 70 67.1
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 2.7e-18 94.7 65 72.3
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 2.7e-18 94.7 58 75.9
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 2.7e-18 94.7 58 75.9
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 4.6e-18 94.0 60 70.0
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 6.0e-18 93.6 62 67.7
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 6.0e-18 93.6 72 65.3
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 1.3e-17 92.4 58 69.0
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 1.3e-15 85.9 58 69.0
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 2.1e-15 85.1 53 67.9
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 3.1e-14 81.3 58 58.6
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 1.0e-12 76.3 55 61.8
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 1.7e-12 75.5 61 59.0
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 1.7e-12 75.5 62 62.9
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 2.9e-12 74.7 60 45.0
Actinidia26161 Actinidia chinensis HOM05D000243 ORTHO05D010086 2.7e-10 68.2 45 68.9
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 6.1e-10 67.0 62 48.4
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 3.3e-08 61.2 62 53.2
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 3.3e-08 61.2 62 51.6
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 3.3e-08 61.2 62 51.6
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 4.3e-08 60.8 62 51.6
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 4.3e-08 60.8 65 53.8
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 1.6e-07 58.9 62 50.0
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 2.8e-07 58.2 61 47.5
Sabra03G0005100 Salix brachista HOM05D007992 ORTHO05D010086 6.3e-07 57.0 36 66.7
CDE02G3423 Ceratophyllum demersum HOM05D007992 ORTHO05D010086 1.8e-06 55.5 59 44.1
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 1.8e-06 55.5 57 45.6
TPR.G17560 Trifolium pratense HOM05D007992 ORTHO05D010086 4.1e-06 54.3 27 88.9
Rhsim11G0125500 Rhododendron simsii HOM05D007992 ORTHO05D010086 6.9e-06 53.5 32 68.8


User provided reference genes

Program Settings