Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2020 Cannabis sativa HOM05D000051 ORTHO05D010453 3.1e-218 761.5 392 100.0
CANSAT54G1896 Cannabis sativa HOM05D000051 ORTHO05D010453 1.3e-102 377.5 407 54.5
CANSAT54G2522 Cannabis sativa HOM05D000051 ORTHO05D010453 6.7e-88 328.6 396 50.8
CANSAT54G0932 Cannabis sativa HOM05D000051 ORTHO05D010453 1.7e-83 313.9 409 49.1
CANSAT54G0219 Cannabis sativa HOM05D000051 ORTHO05D010453 1.2e-81 307.8 388 46.9
CANSAT54G2277 Cannabis sativa HOM05D000051 ORTHO05D010453 3.6e-81 306.2 456 45.4
CANSAT54G0844 Cannabis sativa HOM05D000051 ORTHO05D010453 3.0e-80 303.1 403 46.9
CANSAT54G0861 Cannabis sativa HOM05D000051 ORTHO05D010453 4.4e-79 299.3 389 46.8
CANSAT54G2398 Cannabis sativa HOM05D000051 ORTHO05D010453 2.2e-78 297.0 393 46.3
CANSAT54G2031 Cannabis sativa HOM05D000051 ORTHO05D010453 7.7e-76 288.5 403 45.2
CANSAT54G1220 Cannabis sativa HOM05D000051 ORTHO05D010453 1.9e-74 283.9 399 44.4
CANSAT78G1945 Cannabis sativa HOM05D000051 ORTHO05D010453 9.4e-74 281.6 396 44.4
CANSAT80G2743 Cannabis sativa HOM05D000051 ORTHO05D010453 9.4e-74 281.6 397 47.4
CANSAT80G0613 Cannabis sativa HOM05D000051 ORTHO05D010453 3.5e-68 263.1 393 43.5
CANSAT54G1500 Cannabis sativa HOM05D000051 ORTHO05D010453 8.6e-67 258.5 136 94.1
CANSAT54G2109 Cannabis sativa HOM05D000051 ORTHO05D010453 2.5e-66 256.9 397 43.6
CANSAT56G3036 Cannabis sativa HOM05D000051 ORTHO05D010453 4.2e-66 256.1 405 43.2
CANSAT80G1127 Cannabis sativa HOM05D000051 ORTHO05D010453 4.2e-66 256.1 401 43.1
CANSAT54G1299 Cannabis sativa HOM05D000051 ORTHO05D010453 5.5e-66 255.8 397 44.1
CANSAT56G0180 Cannabis sativa HOM05D000051 ORTHO05D010453 7.2e-66 255.4 404 42.8
CANSAT80G0772 Cannabis sativa HOM05D000051 ORTHO05D010453 1.6e-65 254.2 406 43.1
CANSAT80G0872 Cannabis sativa HOM05D000051 ORTHO05D010453 8.0e-65 251.9 382 41.4
CANSAT80G2918 Cannabis sativa HOM05D000051 ORTHO05D010453 1.8e-64 250.8 381 42.3
CANSAT54G0961 Cannabis sativa HOM05D000051 ORTHO05D010453 3.0e-64 250.0 380 43.7
CANSAT80G0656 Cannabis sativa HOM05D000051 ORTHO05D010453 4.0e-64 249.6 384 43.0
CANSAT56G4105 Cannabis sativa HOM05D000051 ORTHO05D010453 2.0e-63 247.3 398 41.0
CANSAT80G2757 Cannabis sativa HOM05D000051 ORTHO05D010453 2.6e-63 246.9 375 41.9
CANSAT80G0269 Cannabis sativa HOM05D000051 ORTHO05D010453 2.2e-62 243.8 389 42.2
CANSAT80G2895 Cannabis sativa HOM05D000051 ORTHO05D010453 2.2e-62 243.8 408 41.7
CANSAT80G0605 Cannabis sativa HOM05D000051 ORTHO05D010453 4.1e-61 239.6 375 40.5
CANSAT80G1555 Cannabis sativa HOM05D000051 ORTHO05D010453 2.7e-60 236.9 398 40.2
CANSAT80G0468 Cannabis sativa HOM05D000051 ORTHO05D010453 2.3e-59 233.8 370 41.9
CANSAT80G2327 Cannabis sativa HOM05D000051 ORTHO05D010453 5.0e-59 232.6 382 41.1
CANSAT80G2502 Cannabis sativa HOM05D000051 ORTHO05D010453 8.6e-59 231.9 397 42.6
CANSAT80G1381 Cannabis sativa HOM05D000051 ORTHO05D010453 1.5e-58 231.1 404 39.1
CANSAT80G1164 Cannabis sativa HOM05D000051 ORTHO05D010453 3.3e-58 229.9 383 41.8
CANSAT80G2150 Cannabis sativa HOM05D000051 ORTHO05D010453 4.0e-56 223.0 379 43.0
CANSAT80G0894 Cannabis sativa HOM05D000051 ORTHO05D010453 8.9e-56 221.9 396 40.4
CANSAT80G2796 Cannabis sativa HOM05D000051 ORTHO05D010453 2.6e-55 220.3 390 42.1
CANSAT54G0089 Cannabis sativa HOM05D000051 ORTHO05D010453 7.5e-55 218.8 365 41.4
CANSAT54G2718 Cannabis sativa HOM05D000051 ORTHO05D010453 1.1e-45 188.3 295 43.7
CANSAT80G1775 Cannabis sativa HOM05D000051 ORTHO05D010453 5.4e-45 186.0 277 44.4
CANSAT56G0651 Cannabis sativa HOM05D000051 ORTHO05D010453 7.3e-42 175.6 324 39.8
CANSAT80G1807 Cannabis sativa HOM05D000051 ORTHO05D010453 1.3e-38 164.9 335 39.4
CANSAT56G0132 Cannabis sativa HOM05D000051 ORTHO05D010453 1.5e-34 151.4 299 39.5
CANSAT80G2121 Cannabis sativa HOM05D000051 ORTHO05D010453 9.5e-34 148.7 280 39.3
CANSAT54G1732 Cannabis sativa HOM05D000051 ORTHO05D010453 2.9e-30 137.1 184 48.4
CANSAT54G2217 Cannabis sativa HOM05D000051 ORTHO05D010453 5.4e-29 132.9 205 44.9
CANSAT54G1936 Cannabis sativa HOM05D000051 ORTHO05D010453 1.2e-28 131.7 131 51.1
CANSAT54G0519 Cannabis sativa HOM05D000051 ORTHO05D010453 1.6e-25 121.3 111 55.0
CANSAT54G1939 Cannabis sativa HOM05D000051 ORTHO05D010453 2.1e-25 120.9 111 55.0
CANSAT54G2717 Cannabis sativa HOM05D000051 ORTHO05D010453 2.8e-25 120.6 111 55.0
CANSAT54G1088 Cannabis sativa HOM05D000051 ORTHO05D010453 1.4e-24 118.2 112 53.6
CANSAT64G2494 Cannabis sativa HOM05D000051 ORTHO05D001182 1.2e-20 105.1 388 30.9
CANSAT54G1190 Cannabis sativa HOM05D000051 ORTHO05D010453 2.1e-20 104.4 123 48.8
CANSAT80G0932 Cannabis sativa HOM05D000051 ORTHO05D010453 1.0e-19 102.1 106 50.9
CANSAT80G2552 Cannabis sativa HOM05D000051 ORTHO05D010453 1.0e-19 102.1 161 43.5
RcHm_v2.0_Chr2g0161951 Rosa chinensis HOM05D006186 ORTHO05D012372 3.6e-17 93.6 393 29.0
MD09G1093600 Malus domestica HOM05D006186 ORTHO05D009138 6.9e-16 89.4 410 26.6
CANSAT64G1176 Cannabis sativa HOM05D000051 ORTHO05D010453 3.4e-15 87.0 383 28.2
RcHm_v2.0_Chr2g0161931 Rosa chinensis HOM05D006186 ORTHO05D009138 9.9e-15 85.5 387 27.6
ClCG07G013540 Citrullus lanatus HOM05D001477 ORTHO05D001182 2.2e-14 84.3 393 25.7
Manes.09G003200 Manihot esculenta HOM05D001477 ORTHO05D001182 4.9e-14 83.2 383 25.6
Haze_18899 Corylus avellana HOM05D001477 ORTHO05D001182 8.4e-14 82.4 383 27.4
QL04p060686 Quercus lobata HOM05D001477 ORTHO05D001182 4.2e-13 80.1 399 25.1
Haze_03787 Corylus avellana HOM05D001477 ORTHO05D001182 7.1e-13 79.3 400 24.5
QL03p032024 Quercus lobata HOM05D001477 ORTHO05D001182 7.1e-13 79.3 377 26.5
Ciclev10000694m.g Citrus clementina HOM05D001477 ORTHO05D001182 2.1e-12 77.8 395 24.3
CANSAT54G1497 Cannabis sativa HOM05D000051 ORTHO05D010453 7.9e-12 75.9 93 46.2
FAN09G0644 Fragaria x ananassa HOM05D006186 ORTHO05D009138 7.9e-12 75.9 388 27.3
Cfa020769 Carpinus fangiana HOM05D001477 ORTHO05D001182 1.3e-11 75.1 391 26.3
CANSAT54G2358 Cannabis sativa HOM05D000051 ORTHO05D010453 1.8e-11 74.7 100 47.0
FAN17G1634 Fragaria x ananassa HOM05D011168 ORTHO05D012372 1.8e-11 74.7 344 25.0
FvH4_3g02591 Fragaria vesca HOM05D006186 ORTHO05D009138 1.5e-10 71.6 252 27.4
QL01p017794 Quercus lobata HOM05D001477 ORTHO05D001182 1.9e-10 71.2 381 25.7
Cc05_g11410 Coffea canephora HOM05D001477 ORTHO05D001182 3.3e-10 70.5 355 26.5
Manes.07G068500 Manihot esculenta HOM05D001477 ORTHO05D001182 3.3e-10 70.5 387 23.3
RcHm_v2.0_Chr6g0257131 Rosa chinensis HOM05D006186 ORTHO05D009138 3.3e-10 70.5 415 24.3
Sed0010878 Sechium edule HOM05D001477 ORTHO05D001182 4.3e-10 70.1 398 24.6
CiPaw.15G162600 Carya illinoinensis HOM05D001477 ORTHO05D001182 7.4e-10 69.3 383 24.8
QL05p015815 Quercus lobata HOM05D001477 ORTHO05D001182 9.6e-10 68.9 247 29.1
Prupe.8G124900 Prunus persica HOM05D006186 ORTHO05D009138 2.1e-09 67.8 295 27.1
QL04p079456 Quercus lobata HOM05D001477 ORTHO05D001182 2.1e-09 67.8 367 24.0
FvH4_4g07130 Fragaria vesca HOM05D011168 ORTHO05D012372 2.8e-09 67.4 130 35.4
Ciclev10025322m.g Citrus clementina HOM05D001477 ORTHO05D001182 4.8e-09 66.6 205 31.7
CANSAT54G2289 Cannabis sativa HOM05D000051 ORTHO05D010453 1.4e-08 65.1 80 48.8
Peaxi162Scf00062g01115 Petunia axillaris HOM05D009599 ORTHO05D011640 1.4e-08 65.1 320 23.8
CANSAT56G1219 Cannabis sativa HOM05D000051 ORTHO05D010453 6.9e-08 62.8 90 50.0
AUR62022291 Chenopodium quinoa HOM05D001477 ORTHO05D001182 1.5e-07 61.6 405 24.7
FvH4_3g02580 Fragaria vesca HOM05D006186 ORTHO05D009138 1.5e-07 61.6 248 26.2
FvH4_2g05841 Fragaria vesca HOM05D006186 ORTHO05D009138 2.0e-07 61.2 275 23.3
FAN20G0553 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.6e-07 60.8 329 24.0
QL05p010063 Quercus lobata HOM05D001477 ORTHO05D001182 3.4e-07 60.5 123 35.0
Atru.chr1.2844 Acer truncatum HOM05D001477 ORTHO05D001182 1.7e-06 58.2 336 25.0
Eucgr.J00725 Eucalyptus grandis HOM05D001477 ORTHO05D001182 1.7e-06 58.2 236 24.6
FvH4_4g28371 Fragaria vesca HOM05D011168 ORTHO05D012372 1.7e-06 58.2 125 31.2
FAN15G1349 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.7e-06 58.2 267 22.8
FAN02G3420 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.2e-06 57.8 383 23.0
CAN.G635.12 Capsicum annuum HOM05D001477 ORTHO05D001182 2.9e-06 57.4 387 23.5
PGSC0003DMG400009532 Solanum tuberosum HOM05D001477 ORTHO05D001182 2.9e-06 57.4 385 24.7
AUR62023879 Chenopodium quinoa HOM05D001477 ORTHO05D001182 6.4e-06 56.2 384 25.0
Ciclev10027487m.g Citrus clementina HOM05D001477 ORTHO05D001182 6.4e-06 56.2 376 26.1
FAN07G0620 Fragaria x ananassa HOM05D011168 ORTHO05D012372 8.4e-06 55.8 125 30.4


User provided reference genes

Program Settings