Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 3.7e-76 288.1 143 100.0
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 1.4e-59 233.0 143 79.7
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 7.0e-59 230.7 142 77.5
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 7.7e-58 227.3 141 79.4
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 7.2e-56 220.7 143 74.1
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 9.4e-56 220.3 143 74.8
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 9.4e-56 220.3 142 74.6
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 1.2e-55 219.9 143 74.8
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 2.1e-55 219.2 141 73.0
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 6.1e-55 217.6 140 74.3
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 6.1e-55 217.6 142 71.8
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 1.0e-54 216.9 141 73.0
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 1.0e-54 216.9 140 75.7
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 1.0e-54 216.9 140 72.9
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 1.4e-54 216.5 138 73.2
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 1.4e-54 216.5 140 72.9
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 1.8e-54 216.1 140 74.3
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 1.8e-54 216.1 140 76.4
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 2.3e-54 215.7 140 73.6
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 2.3e-54 215.7 140 73.6
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 2.3e-54 215.7 135 76.3
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 2.3e-54 215.7 143 73.4
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 3.0e-54 215.3 138 73.2
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 3.0e-54 215.3 138 73.2
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 3.0e-54 215.3 140 73.6
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 3.0e-54 215.3 140 75.0
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 4.0e-54 214.9 140 75.0
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 4.0e-54 214.9 140 74.3
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 8.8e-54 213.8 143 72.7
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 1.2e-53 213.4 138 76.1
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 1.5e-53 213.0 138 75.4
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.5e-53 213.0 142 71.8
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.5e-53 213.0 142 71.8
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 1.5e-53 213.0 138 72.5
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 3.3e-53 211.8 138 74.6
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 3.3e-53 211.8 139 71.9
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 4.4e-53 211.5 138 73.2
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 5.7e-53 211.1 138 74.6
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 5.7e-53 211.1 138 74.6
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 5.7e-53 211.1 138 74.6
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 5.7e-53 211.1 138 74.6
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 5.7e-53 211.1 138 74.6
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 5.7e-53 211.1 144 70.8
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 5.7e-53 211.1 137 73.0
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 5.7e-53 211.1 140 70.7
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 7.5e-53 210.7 140 72.1
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 1.3e-52 209.9 138 73.2
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.7e-52 209.5 144 70.1
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 2.2e-52 209.1 138 73.9
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 2.2e-52 209.1 142 70.4
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 3.7e-52 208.4 143 69.2
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 4.8e-52 208.0 138 73.2
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 8.2e-52 207.2 136 72.1
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 8.2e-52 207.2 140 70.7
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 8.2e-52 207.2 138 71.7
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 8.2e-52 207.2 140 72.9
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 1.1e-51 206.8 143 69.2
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 1.1e-51 206.8 143 70.6
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 1.8e-51 206.1 137 74.5
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 1.8e-51 206.1 137 74.5
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 1.8e-51 206.1 138 70.3
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 1.8e-51 206.1 144 68.8
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 2.4e-51 205.7 141 70.2
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 2.4e-51 205.7 140 71.4
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 2.4e-51 205.7 139 71.2
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 2.4e-51 205.7 137 70.1
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 4.1e-51 204.9 138 71.0
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 4.1e-51 204.9 138 71.7
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 5.3e-51 204.5 136 71.3
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 5.3e-51 204.5 138 70.3
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 7.0e-51 204.1 139 69.8
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 9.1e-51 203.8 136 69.9
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 1.2e-50 203.4 138 71.0
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 2.0e-50 202.6 139 70.5
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 2.0e-50 202.6 139 73.4
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 2.0e-50 202.6 144 67.4
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 2.7e-50 202.2 144 67.4
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 2.7e-50 202.2 137 73.7
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 3.5e-50 201.8 143 66.4
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 3.5e-50 201.8 138 71.7
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 5.9e-50 201.1 137 72.3
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 5.9e-50 201.1 137 68.6
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 1.7e-49 199.5 138 69.6
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.2e-49 199.1 144 66.7
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 5.0e-49 198.0 138 68.8
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 5.0e-49 198.0 137 67.2
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 8.5e-49 197.2 137 69.3
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 8.5e-49 197.2 137 70.8
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 2.1e-47 192.6 139 63.3
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 3.6e-47 191.8 132 68.2
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 2.0e-45 186.0 129 72.1
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 5.7e-45 184.5 134 67.2
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 6.3e-44 181.0 143 65.7
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 5.4e-43 177.9 139 61.2
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 9.1e-43 177.2 132 61.4
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 4.5e-42 174.9 126 70.6
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 4.7e-39 164.9 162 54.9
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 4.7e-39 164.9 133 59.4
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 6.8e-38 161.0 99 77.8
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 5.7e-37 157.9 132 62.9
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 1.7e-36 156.4 129 60.5
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.1e-35 153.7 158 55.1
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 1.2e-34 150.2 96 75.0
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 1.3e-33 146.7 99 71.7
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 2.9e-33 145.6 140 57.9
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 1.8e-30 136.3 106 65.1
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 4.0e-30 135.2 138 55.1
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 1.2e-29 133.7 94 68.1
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 2.0e-29 132.9 102 62.7
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 2.6e-29 132.5 140 52.9
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 2.6e-29 132.5 140 55.0
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 3.4e-29 132.1 97 66.0
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 1.5e-24 116.7 60 95.0
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 4.4e-21 105.1 140 45.0
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 1.2e-18 97.1 100 52.0
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.0e-17 94.0 131 39.7
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 3.9e-17 92.0 140 40.0
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 3.9e-17 92.0 128 39.8
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 5.0e-17 91.7 62 67.7
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.1e-16 90.5 96 49.0
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 2.5e-16 89.4 62 69.4
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 6.8e-14 81.3 118 39.0
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 4.4e-13 78.6 46 78.3
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 7.8e-10 67.8 44 72.7
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 8.6e-09 64.3 145 32.4
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 2.5e-08 62.8 37 78.4
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 2.1e-07 59.7 33 81.8
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 2.4e-06 56.2 41 70.7


User provided reference genes

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