Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G1971 Cannabis sativa HOM05D003201 ORTHO05D008914 2.3e-159 565.5 279 100.0
MELO3C011176.2 Cucumis melo HOM05D003201 ORTHO05D008914 1.6e-107 393.3 280 68.6
QL12p025722 Quercus lobata HOM05D003201 ORTHO05D008914 1.6e-107 393.3 279 68.8
ClCG08G012570 Citrullus lanatus HOM05D003201 ORTHO05D008914 3.9e-106 388.7 282 68.8
CsaV3_2G031270 Cucumis sativus L. HOM05D003201 ORTHO05D008914 4.3e-105 385.2 284 66.9
Manes.02G219100 Manihot esculenta HOM05D003201 ORTHO05D008914 1.3e-104 383.6 279 67.7
CiPaw.07G210300 Carya illinoinensis HOM05D003201 ORTHO05D008914 5.3e-103 378.3 281 68.0
MD15G1105100 Malus domestica HOM05D003201 ORTHO05D008914 5.8e-102 374.8 279 66.3
Duzib084G1420 Durio zibethinus HOM05D003201 ORTHO05D008914 1.1e-100 370.5 284 65.1
GSVIVG01035604001 Vitis vinifera HOM05D003201 ORTHO05D008914 2.4e-100 369.4 278 66.2
Ciclev10016172m.g Citrus clementina HOM05D003201 ORTHO05D008914 1.6e-99 366.7 278 65.8
CSS0009288 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 1.3e-98 363.6 282 65.6
Thecc.03G318200 Theobroma cacao HOM05D003201 ORTHO05D008914 1.3e-98 363.6 279 65.2
FvH4_2g36540 Fragaria vesca HOM05D003201 ORTHO05D008914 1.8e-98 363.2 283 64.0
CSS0050223 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 5.1e-98 361.7 282 65.2
Prupe.1G456900 Prunus persica HOM05D003201 ORTHO05D008914 6.7e-98 361.3 278 65.8
Gohir.A12G202300 Gossypium hirsutum HOM05D003201 ORTHO05D008914 8.7e-98 360.9 277 64.3
Gohir.D12G205000 Gossypium hirsutum HOM05D003201 ORTHO05D008914 1.9e-97 359.8 277 63.9
Glyma.06G078200 Glycine max HOM05D003201 ORTHO05D008914 3.3e-97 359.0 281 63.0
RcHm_v2.0_Chr6g0305311 Rosa chinensis HOM05D003201 ORTHO05D008914 7.4e-97 357.8 281 63.7
Actinidia29333 Actinidia chinensis HOM05D003201 ORTHO05D008914 2.8e-96 355.9 278 64.7
Glyma.04G077000 Glycine max HOM05D003201 ORTHO05D008914 4.8e-96 355.1 279 61.3
Gorai.008G219900 Gossypium raimondii HOM05D003201 ORTHO05D008914 8.1e-96 354.4 278 62.9
Psat5g023760 Pisum sativum HOM05D003201 ORTHO05D008914 1.1e-95 354.0 281 61.9
Cpa.g.sc30.52 Carica papaya HOM05D003201 ORTHO05D008914 3.1e-95 352.4 277 62.8
FAN15G0760 Fragaria x ananassa HOM05D003201 ORTHO05D008914 3.1e-95 352.4 283 63.3
Peaxi162Scf00314g00636 Petunia axillaris HOM05D003201 ORTHO05D008914 2.6e-94 349.4 282 62.1
TPR.G12401 Trifolium pratense HOM05D003201 ORTHO05D008914 5.8e-94 348.2 279 61.3
Aqoxy7G00979 Aquilegia oxysepala HOM05D003201 ORTHO05D008914 1.0e-93 347.4 285 61.8
SalBow8G4280 Salvia bowleyana HOM05D003201 ORTHO05D008914 1.3e-93 347.1 281 62.3
Eucgr.E04307 Eucalyptus grandis HOM05D003201 ORTHO05D008914 3.8e-93 345.5 276 62.3
THA.LOC104811993 Tarenaya hassleriana HOM05D003201 ORTHO05D008914 6.5e-93 344.7 277 59.9
DCAR_002183 Daucus carota HOM05D003201 ORTHO05D008914 4.2e-92 342.0 279 64.5
Dinv37468 Davidia involucrata HOM05D003201 ORTHO05D008914 9.3e-92 340.9 232 69.4
Nitab4.5_0000391g0210 Nicotiana tabacum HOM05D003201 ORTHO05D008914 1.6e-91 340.1 278 61.2
Sopen05g007740 Solanum pennellii HOM05D003201 ORTHO05D008914 2.1e-91 339.7 278 61.2
CAN.G964.23 Capsicum annuum HOM05D003201 ORTHO05D008914 2.7e-91 339.3 276 60.9
Cc11_g12550 Coffea canephora HOM05D003201 ORTHO05D008914 3.5e-91 339.0 279 61.6
Solyc05g012940.4 Solanum lycopersicum HOM05D003201 ORTHO05D008914 3.5e-91 339.0 278 61.2
Nitab4.5_0012553g0020 Nicotiana tabacum HOM05D003201 ORTHO05D008914 4.6e-91 338.6 277 61.0
Potri.006G280600 Populus trichocarpa HOM05D003201 ORTHO05D008914 7.9e-91 337.8 277 63.9
Hund03239 Selenicereus undatus HOM05D003201 ORTHO05D008914 7.9e-91 337.8 278 61.2
Lalb_Chr11g0064231 Lupinus albus HOM05D003201 ORTHO05D008914 1.0e-90 337.4 272 64.3
Lj1g0010900 Lotus japonicus HOM05D003201 ORTHO05D008914 1.8e-90 336.7 282 62.4
arahy.Tifrunner.gnm1.ann1.6BLG7S Arachis hypogaea HOM05D003201 ORTHO05D008914 3.0e-90 335.9 307 56.4
arahy.Tifrunner.gnm1.ann1.N5J460 Arachis hypogaea HOM05D003201 ORTHO05D008914 3.3e-89 332.4 314 54.8
AUR62028026 Chenopodium quinoa HOM05D003201 ORTHO05D008914 4.3e-89 332.0 278 59.0
PGSC0003DMG402028340 Solanum tuberosum HOM05D003201 ORTHO05D008914 5.7e-89 331.6 278 59.7
TWI18G0285 Tripterygium wilfordii HOM05D003201 ORTHO05D008914 3.7e-88 328.9 278 60.1
HanXRQChr15g0468831 Helianthus annuus HOM05D003201 ORTHO05D008914 1.1e-87 327.4 278 58.3
SGA_v2.0_scaffold45G16974 Striga asiatica HOM05D003201 ORTHO05D008914 4.1e-87 325.5 281 57.7
CARHR227150 Cardamine hirsuta HOM05D003201 ORTHO05D008914 5.3e-87 325.1 278 58.3
EL10Ac8g19259 Beta vulgaris HOM05D003201 ORTHO05D008914 9.0e-87 324.3 281 58.7
AL7G33570 Arabidopsis lyrata HOM05D003201 ORTHO05D008914 2.6e-86 322.8 277 57.8
Rhsim07G0174100 Rhododendron simsii HOM05D003201 ORTHO05D008914 4.5e-86 322.0 374 48.7
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 7.6e-86 321.2 274 57.7
PSO782G1293 Papaver somniferum HOM05D003201 ORTHO05D008914 7.6e-86 321.2 277 57.0
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 1.7e-85 320.1 273 57.9
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 6.5e-85 318.2 273 57.1
BraA03t14319Z Brassica rapa HOM05D003201 ORTHO05D008914 6.5e-85 318.2 275 58.2
AT4G20325 Arabidopsis thaliana HOM05D003201 ORTHO05D008914 8.5e-85 317.8 278 56.1
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 1.1e-84 317.4 276 58.7
Migut.E00069 Erythranthe guttata HOM05D003201 ORTHO05D008914 1.1e-84 317.4 280 56.1
PGR042G2091 Punica granatum HOM05D003201 ORTHO05D008914 1.4e-84 317.0 279 57.0
Atru.BG.264.p Acer truncatum HOM05D003201 ORTHO05D008914 1.9e-84 316.6 268 60.4
BcaC06g30651 Brassica carinata HOM05D003201 ORTHO05D008914 1.9e-84 316.6 276 57.6
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 2.5e-84 316.2 275 56.0
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 4.2e-84 315.5 273 56.8
BcaNung03501 Brassica carinata HOM05D003201 ORTHO05D008914 7.2e-84 314.7 276 56.5
C07p50860 Brassica napus HOM05D000936 ORTHO05D008914 7.2e-84 314.7 276 56.5
Carub.0007s2085 Capsella rubella HOM05D003201 ORTHO05D008914 2.1e-83 313.2 277 57.0
A03p52400 Brassica napus HOM05D000936 ORTHO05D008914 3.6e-83 312.4 276 56.5
VMungo1309G0938 Vigna mungo HOM05D003201 ORTHO05D008914 4.6e-83 312.0 351 48.1
Ca_15643_v3 Cicer arietinum L. HOM05D000163 ORTHO05D000219 1.0e-82 310.8 266 57.9
BolC7t45584H Brassica oleracea HOM05D000936 ORTHO05D008914 1.8e-82 310.1 276 56.2
Thhalv10025951m.g Eutrema salsugineum HOM05D003201 ORTHO05D008914 1.8e-82 310.1 275 55.3
FAN20G1097 Fragaria x ananassa HOM05D000163 ORTHO05D008914 3.0e-82 309.3 252 61.1
Sp7g18670 Schrenkiella parvula HOM05D003201 ORTHO05D008914 6.7e-82 308.1 276 56.2
Phvul.009G102800 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 9.7e-81 304.3 205 68.3
Lsat_1_v5_gn_5_73181 Lactuca sativa HOM05D003201 ORTHO05D008914 7.7e-78 294.7 268 54.9
ATR0686G110 Amborella trichopoda HOM05D003201 ORTHO05D008914 2.7e-75 286.2 245 57.6
BcaNung03722 Brassica carinata HOM05D000936 ORTHO05D001411 3.3e-73 279.3 276 50.7
HPP92_024271 Vanilla planifolia HOM05D003201 ORTHO05D008914 2.2e-72 276.6 259 56.8
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 1.4e-71 273.9 316 50.3
AUR62020698 Chenopodium quinoa HOM05D003201 ORTHO05D008914 2.6e-70 269.6 277 51.3
vmacro05085 Vaccinium macrocarpon HOM05D003201 ORTHO05D008914 1.1e-68 264.2 499 35.5
Sc23g0004340 Simmondsia chinensis HOM05D003201 ORTHO05D008914 2.1e-67 260.0 210 60.5
Sed0017242 Sechium edule HOM05D003201 ORTHO05D008914 7.4e-65 251.5 185 67.6
TAR636G2614 Trochodendron aralioides HOM05D003201 ORTHO05D008914 2.4e-63 246.5 157 71.3
SEGI_35572 Sequoiadendron giganteum HOM05D003201 ORTHO05D008914 3.5e-62 242.7 280 46.1
Potri.006G281101 Populus trichocarpa HOM05D003201 ORTHO05D008914 1.8e-58 230.3 215 56.3
FAN27G2114 Fragaria x ananassa HOM05D000163 ORTHO05D000219 5.7e-57 225.3 217 56.2
Mapoly0037s0034 Marchantia polymorpha HOM05D003201 ORTHO05D008914 4.2e-52 209.1 206 46.1
AagrBONN_evm.TU.Sc2ySwM_344.2003 Anthoceros agrestis HOM05D003201 ORTHO05D008914 1.2e-49 201.1 203 47.3
Pp3c10_22770 Physcomitrium patens HOM05D003201 ORTHO05D008914 9.8e-49 198.0 269 39.0
unitig_32.g11042 Utricularia gibba HOM05D003201 ORTHO05D008914 8.6e-45 184.9 190 52.1
SMO115G0061 Selaginella moellendorffii HOM05D003201 ORTHO05D008914 5.2e-42 175.6 227 36.6
SHI31610 Sapria himalayana HOM05D003201 ORTHO05D008914 2.7e-38 163.3 112 65.2
Zm00001eb079750 Zea mays HOM05D003201 ORTHO05D008914 2.5e-36 156.8 183 47.5
MD08G1125300 Malus domestica HOM05D003201 ORTHO05D008914 3.2e-31 139.8 224 38.8
Nn7g38306 Nelumbo nucifera HOM05D003201 ORTHO05D008914 6.6e-29 132.1 102 60.8
CDE05G1961 Ceratophyllum demersum HOM05D003201 ORTHO05D008914 5.2e-26 122.5 140 48.6
COL.COLO4_10365 Corchorus olitorius HOM05D003201 ORTHO05D008914 4.4e-25 119.4 180 40.6
TPR.G12326 Trifolium pratense HOM05D003201 ORTHO05D008914 3.2e-23 113.2 72 72.2
Hma1.2p1_1357F.1_g277905 Hydrangea macrophylla HOM05D003201 ORTHO05D008914 7.3e-20 102.1 71 64.8
Os04g0476400 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008914 3.6e-19 99.8 86 55.8
CBR_g23989 Chara braunii HOM05D003201 ORTHO05D008914 5.8e-17 92.4 68 58.8
PRCOL_00004174 Prasinoderma coloniale HOM05D003201 ORTHO05D008914 2.7e-14 83.6 207 27.5
CBR_g23991 Chara braunii HOM05D003201 ORTHO05D008914 3.1e-10 70.1 73 45.2
Cre07.g320800 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008914 1.7e-08 64.3 64 43.8
Phvul.009G102700 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 1.1e-07 61.6 96 40.6


User provided reference genes

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