Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 9.3e-184 646.7 325 100.0
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 1.7e-121 439.9 300 74.7
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 1.9e-120 436.4 300 74.3
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 3.2e-120 435.6 300 74.3
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 1.6e-119 433.3 309 72.5
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 4.0e-118 428.7 289 73.4
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 4.4e-117 425.2 300 71.3
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 7.5e-117 424.5 301 71.4
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 1.7e-116 423.3 296 72.0
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 2.2e-116 422.9 303 71.3
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 2.2e-116 422.9 297 72.1
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 1.8e-115 419.9 294 73.1
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 2.4e-115 419.5 294 73.1
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 3.1e-115 419.1 300 71.7
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 4.1e-115 418.7 297 72.7
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 2.0e-114 416.4 295 73.2
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 3.8e-113 412.1 294 71.8
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 1.1e-112 410.6 302 70.5
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 1.9e-112 409.8 293 71.0
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.9e-112 409.8 282 72.7
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 9.4e-112 407.5 295 71.5
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 1.6e-111 406.8 302 68.5
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 4.7e-111 405.2 291 72.2
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 4.7e-111 405.2 289 72.7
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 6.1e-111 404.8 294 70.4
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 8.0e-111 404.4 290 70.0
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 3.0e-110 402.5 291 69.8
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 4.0e-110 402.1 285 71.2
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 5.2e-110 401.7 328 66.5
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 3.4e-109 399.1 292 70.2
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 4.4e-109 398.7 304 69.1
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 4.4e-109 398.7 298 69.5
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 1.7e-108 396.7 292 68.8
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 2.2e-108 396.4 328 65.9
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 3.7e-108 395.6 311 67.5
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 1.1e-107 394.0 293 70.0
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 1.4e-107 393.7 310 67.7
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 5.4e-107 391.7 268 70.1
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 7.0e-107 391.3 298 68.1
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 7.0e-107 391.3 293 70.6
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 9.2e-107 391.0 285 68.1
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 2.0e-106 389.8 290 68.6
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 2.7e-106 389.4 290 68.6
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 3.5e-106 389.0 283 68.2
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 4.5e-106 388.7 299 67.2
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 1.0e-105 387.5 298 67.4
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 1.0e-105 387.5 295 69.2
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 2.3e-105 386.3 293 66.9
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 2.3e-105 386.3 279 69.5
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 6.6e-105 384.8 270 72.6
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.9e-104 383.3 336 62.8
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 2.5e-104 382.9 298 66.8
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 4.3e-104 382.1 298 68.5
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 7.3e-104 381.3 312 66.7
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 1.2e-103 380.6 297 65.7
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 1.2e-103 380.6 297 65.3
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 2.1e-103 379.8 297 66.0
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 2.1e-103 379.8 267 68.5
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 2.8e-103 379.4 267 68.9
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 6.1e-103 378.3 291 65.3
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 1.8e-102 376.7 292 66.8
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 4.0e-102 375.6 302 64.9
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 8.9e-102 374.4 291 67.0
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 2.0e-101 373.2 311 64.0
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 2.0e-101 373.2 267 68.9
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 2.0e-101 373.2 291 67.0
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 2.6e-101 372.9 284 65.1
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 4.4e-101 372.1 347 58.5
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 2.9e-100 369.4 304 64.5
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 3.7e-100 369.0 300 67.3
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 3.7e-100 369.0 294 65.6
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 3.2e-99 365.9 331 61.9
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 2.7e-98 362.8 309 65.0
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 3.5e-98 362.5 309 61.8
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 5.9e-98 361.7 295 63.7
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 1.0e-97 360.9 261 67.4
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 1.3e-97 360.5 285 67.4
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 8.6e-97 357.8 280 67.5
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 4.3e-96 355.5 291 66.0
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 9.5e-96 354.4 300 63.3
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 2.1e-95 353.2 287 65.9
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 2.8e-95 352.8 305 65.2
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 2.8e-95 352.8 293 62.8
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 9.2e-91 337.8 302 60.6
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 6.0e-90 335.1 255 65.9
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 8.9e-86 321.2 291 61.2
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 2.0e-85 320.1 297 59.9
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 2.9e-84 316.2 301 58.1
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 1.4e-83 313.9 287 61.0
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 1.4e-83 313.9 308 58.8
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 9.2e-83 311.2 317 55.2
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 2.1e-82 310.1 289 60.6
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 2.7e-82 309.7 286 59.4
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.6e-79 300.4 249 63.1
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 1.3e-76 290.8 304 54.3
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 1.3e-76 290.8 297 54.2
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 2.1e-74 283.5 195 72.8
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 1.7e-73 280.4 226 61.5
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 7.3e-72 275.0 295 51.5
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 1.3e-65 254.2 198 66.2
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 4.0e-62 242.7 177 68.9
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 2.6e-61 240.0 310 49.4
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 3.4e-61 239.6 180 69.4
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 7.1e-59 231.9 305 44.6
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 2.1e-55 220.3 141 73.0
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 5.8e-53 212.2 226 50.9
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 7.6e-53 211.8 159 66.0
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 4.2e-51 206.1 175 64.6
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 5.5e-51 205.7 167 64.7
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 1.2e-50 204.5 156 71.2
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 3.5e-50 203.0 124 77.4
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 7.9e-50 201.8 303 38.9
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 7.9e-50 201.8 161 67.7
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 4.8e-47 192.6 303 40.9
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 6.2e-47 192.2 304 44.1
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 1.2e-45 188.0 269 37.9
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.8e-41 174.1 151 62.9
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.0e-36 158.3 159 57.9
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 1.0e-33 148.3 105 71.4
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 1.3e-33 147.9 104 69.2
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 3.0e-33 146.7 135 60.7
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 4.8e-31 139.4 118 63.6
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 4.4e-24 116.3 89 59.6
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 2.8e-23 113.6 73 72.6
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 3.7e-23 113.2 111 59.5
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 2.2e-20 104.0 113 57.5
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 2.5e-19 100.5 79 65.8
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 2.1e-18 97.4 105 54.3
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 1.0e-17 95.1 252 31.3
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 2.3e-17 94.0 110 48.2
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 3.7e-15 86.7 84 59.5
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 2.4e-14 84.0 292 28.4
PRCOL_00005036 Prasinoderma coloniale HOM05D005786 ORTHO05D006946 1.5e-08 64.7 169 29.6


User provided reference genes

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