Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G1607 Cannabis sativa HOM05D002160 ORTHO05D002012 2.7e-25 118.2 67 100.0
Cfa011500 Carpinus fangiana HOM05D002160 ORTHO05D002012 5.9e-12 73.9 67 71.6
Haze_24095 Corylus avellana HOM05D002160 ORTHO05D002012 6.5e-11 70.5 67 70.1
Prupe.6G077900 Prunus persica HOM05D002160 ORTHO05D002012 6.5e-11 70.5 67 70.1
Atru.chr3.3900 Acer truncatum HOM05D002160 ORTHO05D002012 1.4e-10 69.3 66 65.2
Atru.chr3.3901 Acer truncatum HOM05D002160 ORTHO05D002012 1.4e-10 69.3 66 65.2
CANSAT54G0665 Cannabis sativa HOM05D002160 ORTHO05D002012 2.1e-09 65.5 65 63.1
Atru.chr3.3902 Acer truncatum HOM05D002160 ORTHO05D002012 2.7e-09 65.1 47 66.0
Potri.001G239650 Populus trichocarpa HOM05D002160 ORTHO05D002012 1.8e-08 62.4 47 70.2
BcaC03g18434 Brassica carinata HOM05D002160 ORTHO05D002012 6.7e-08 60.5 66 43.9
CiPaw.10G145500 Carya illinoinensis HOM05D002160 ORTHO05D002012 6.7e-08 60.5 66 54.5
Prupe.6G077800 Prunus persica HOM05D002160 ORTHO05D002012 1.5e-07 59.3 70 61.4
TWI31G0095 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 2.6e-07 58.5 66 48.5
GSVIVG01034174001 Vitis vinifera HOM05D002160 ORTHO05D002012 2.6e-07 58.5 49 61.2
Ca_03760_v3 Cicer arietinum L. HOM05D002160 ORTHO05D002012 3.3e-07 58.2 65 58.5
arahy.Tifrunner.gnm1.ann1.FFQQ4A Arachis hypogaea HOM05D002160 ORTHO05D002012 4.4e-07 57.8 49 53.1
BcaNung06991 Brassica carinata HOM05D002160 ORTHO05D002012 4.4e-07 57.8 66 40.9
C02p00440 Brassica napus HOM05D002160 ORTHO05D002012 4.4e-07 57.8 66 40.9
BolC2t06044H Brassica oleracea HOM05D002160 ORTHO05D002012 4.4e-07 57.8 66 40.9
TAR369G0024 Trochodendron aralioides HOM05D002160 ORTHO05D002012 4.4e-07 57.8 49 59.2
arahy.Tifrunner.gnm1.ann1.EU8JQM Arachis hypogaea HOM05D002160 ORTHO05D002012 5.7e-07 57.4 49 53.1
BraA02t04716Z Brassica rapa HOM05D002160 ORTHO05D002012 9.7e-07 56.6 66 39.4
Gohir.D13G229100 Gossypium hirsutum HOM05D002160 ORTHO05D002012 9.7e-07 56.6 65 60.0
Gorai.013G260000 Gossypium raimondii HOM05D002160 ORTHO05D002012 9.7e-07 56.6 65 60.0
Cfa011502 Carpinus fangiana HOM05D002160 ORTHO05D002012 1.3e-06 56.2 93 49.5
CiPaw.14G068500 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.3e-06 56.2 66 51.5
Thhalv10015167m.g Eutrema salsugineum HOM05D002160 ORTHO05D002012 1.7e-06 55.8 66 39.4
QL07p048273 Quercus lobata HOM05D002160 ORTHO05D002012 1.7e-06 55.8 49 59.2
arahy.Tifrunner.gnm1.ann1.02J1VT Arachis hypogaea HOM05D002160 ORTHO05D002012 2.2e-06 55.5 49 51.0
arahy.Tifrunner.gnm1.ann1.8X9BUY Arachis hypogaea HOM05D002160 ORTHO05D002012 2.2e-06 55.5 49 51.0
Gohir.A13G224300 Gossypium hirsutum HOM05D002160 ORTHO05D002012 2.2e-06 55.5 65 60.0
Gohir.D13G229300 Gossypium hirsutum HOM05D002160 ORTHO05D002012 2.2e-06 55.5 65 60.0
QL07p048278 Quercus lobata HOM05D002160 ORTHO05D002012 2.8e-06 55.1 66 51.5
Glyma.07G132000 Glycine max HOM05D002160 ORTHO05D002012 3.7e-06 54.7 49 53.1
Glyma.18G180800 Glycine max HOM05D002160 ORTHO05D002012 3.7e-06 54.7 47 55.3
Lalb_Chr19g0125331 Lupinus albus HOM05D002160 ORTHO05D002012 3.7e-06 54.7 71 56.3
SalBow3G1804 Salvia bowleyana HOM05D002160 ORTHO05D002012 3.7e-06 54.7 66 47.0
BcaC06g31984 Brassica carinata HOM05D002160 ORTHO05D002012 4.8e-06 54.3 66 39.4
BcaNung02128 Brassica carinata HOM05D002160 ORTHO05D002012 4.8e-06 54.3 66 37.9
A10p33280 Brassica napus HOM05D002160 ORTHO05D002012 4.8e-06 54.3 66 37.9
C09p74190 Brassica napus HOM05D002160 ORTHO05D002012 4.8e-06 54.3 66 37.9
BolC9t60152H Brassica oleracea HOM05D002160 ORTHO05D002012 4.8e-06 54.3 66 37.9
TPR.G5610 Trifolium pratense HOM05D002160 ORTHO05D002012 4.8e-06 54.3 65 60.0
Gohir.A04G082400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 6.3e-06 53.9 49 57.1
GSVIVG01027808001 Vitis vinifera HOM05D002160 ORTHO05D002012 6.3e-06 53.9 49 57.1


User provided reference genes

Program Settings