Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G1350 Cannabis sativa HOM05D005999 ORTHO05D003360 9.0e-24 114.4 177 100.0
CANSAT25G3254 Cannabis sativa HOM05D005999 ORTHO05D003360 2.9e-14 82.8 169 82.2
CANSAT01G1435 Cannabis sativa HOM05D005999 ORTHO05D003360 1.9e-10 70.1 35 91.4
CANSAT54G2046 Cannabis sativa HOM05D005999 ORTHO05D003360 4.3e-10 68.9 35 91.4
Ciclev10025620m.g Citrus clementina HOM05D005999 ORTHO05D003360 3.1e-08 62.8 35 74.3
MD02G1122900 Malus domestica HOM05D005999 ORTHO05D003360 4.1e-08 62.4 34 79.4
Prupe.7G175600 Prunus persica HOM05D005999 ORTHO05D003360 5.3e-08 62.0 34 76.5
PGR119G0821 Punica granatum HOM05D005999 ORTHO05D003360 9.0e-08 61.2 34 76.5
QL06p052235 Quercus lobata HOM05D005999 ORTHO05D003360 1.2e-07 60.8 34 73.5
arahy.Tifrunner.gnm1.ann1.74V199 Arachis hypogaea HOM05D005999 ORTHO05D003360 1.5e-07 60.5 35 71.4
arahy.Tifrunner.gnm1.ann1.JK0YGC Arachis hypogaea HOM05D005999 ORTHO05D003360 1.5e-07 60.5 35 71.4
GSVIVG01005198001 Vitis vinifera HOM05D005999 ORTHO05D003360 1.5e-07 60.5 34 73.5
Atru.chr3.914 Acer truncatum HOM05D005999 ORTHO05D003360 2.0e-07 60.1 35 71.4
Atru.chr3.919 Acer truncatum HOM05D005999 ORTHO05D003360 2.0e-07 60.1 35 71.4
COL.COLO4_22501 Corchorus olitorius HOM05D005999 ORTHO05D003360 2.6e-07 59.7 34 73.5
Duzib147G0884 Durio zibethinus HOM05D005999 ORTHO05D003360 2.6e-07 59.7 34 73.5
Gohir.A02G174800 Gossypium hirsutum HOM05D005999 ORTHO05D003360 2.6e-07 59.7 34 73.5
Gohir.D03G005000 Gossypium hirsutum HOM05D005999 ORTHO05D003360 2.6e-07 59.7 34 73.5
Gorai.003G005300 Gossypium raimondii HOM05D005999 ORTHO05D003360 2.6e-07 59.7 34 73.5
PSO170G6629 Papaver somniferum HOM05D005999 ORTHO05D003360 2.6e-07 59.7 34 73.5
Thecc.01G010800 Theobroma cacao HOM05D005999 ORTHO05D003360 2.6e-07 59.7 34 73.5
Eucgr.I02298 Eucalyptus grandis HOM05D005999 ORTHO05D003360 3.4e-07 59.3 35 68.6
Lalb_Chr05g0212151 Lupinus albus HOM05D005999 ORTHO05D003360 3.4e-07 59.3 35 68.6
PSO210G1231 Papaver somniferum HOM05D005999 ORTHO05D003360 3.4e-07 59.3 34 73.5
Aqoxy5G01092 Aquilegia oxysepala HOM05D005999 ORTHO05D002169 4.5e-07 58.9 34 73.5
AUR62026380 Chenopodium quinoa HOM05D005999 ORTHO05D003360 4.5e-07 58.9 35 68.6
Nn6g31889 Nelumbo nucifera HOM05D005999 ORTHO05D003360 4.5e-07 58.9 34 70.6
Ca_24948_v3 Cicer arietinum L. HOM05D005999 ORTHO05D003360 5.9e-07 58.5 35 65.7
MBI05_g32278_MAGBIO Magnolia biondii HOM05D005999 ORTHO05D003360 7.7e-07 58.2 34 70.6
AUR62026216 Chenopodium quinoa HOM05D005999 ORTHO05D003360 1.0e-06 57.8 35 65.7
Dinv08545 Davidia involucrata HOM05D005999 ORTHO05D003360 1.3e-06 57.4 34 70.6
TAR628G0133 Trochodendron aralioides HOM05D005999 ORTHO05D003360 1.3e-06 57.4 34 70.6
Actinidia28736 Actinidia chinensis HOM05D005999 ORTHO05D003360 1.7e-06 57.0 34 67.6
Cpa.g.sc6.319 Carica papaya HOM05D005999 ORTHO05D003360 1.7e-06 57.0 34 70.6
Glyma.11G081800 Glycine max HOM05D005999 ORTHO05D003360 1.7e-06 57.0 35 62.9
Manes.01G151300 Manihot esculenta HOM05D005999 ORTHO05D003360 1.7e-06 57.0 34 70.6
THA.LOC104826498 Tarenaya hassleriana HOM05D005999 ORTHO05D003360 1.7e-06 57.0 35 65.7
CSS0001074 Camellia sinensis var. sinensis HOM05D005999 ORTHO05D003360 2.2e-06 56.6 35 62.9
Lj2g0014093 Lotus japonicus HOM05D005999 ORTHO05D003360 2.2e-06 56.6 34 67.6
Glyma.01G161900 Glycine max HOM05D005999 ORTHO05D003360 2.9e-06 56.2 35 62.9
Duzib187G1063 Durio zibethinus HOM05D005999 ORTHO05D003360 3.8e-06 55.8 34 67.6
Sabra05G0086500 Salix brachista HOM05D005999 ORTHO05D003360 3.8e-06 55.8 167 88.0
Ah.02g129080 Amaranthus hybridus HOM05D005999 ORTHO05D003360 5.0e-06 55.5 35 62.9
Glyma.11G081900 Glycine max HOM05D005999 ORTHO05D003360 5.0e-06 55.5 34 64.7
Phvul.002G104000 Phaseolus vulgaris HOM05D005999 ORTHO05D003360 5.0e-06 55.5 35 65.7
vmacro18444 Vaccinium macrocarpon HOM05D005999 ORTHO05D003360 6.5e-06 55.1 35 62.9
Zm00001eb002820 Zea mays HOM05D005999 ORTHO05D003360 6.5e-06 55.1 34 61.8
CiPaw.08G125500 Carya illinoinensis HOM05D005999 ORTHO05D003360 8.5e-06 54.7 32 68.8
Potri.007G060400 Populus trichocarpa HOM05D005999 ORTHO05D003360 8.5e-06 54.7 34 64.7
Rhsim08G0029800 Rhododendron simsii HOM05D005999 ORTHO05D003360 8.5e-06 54.7 35 62.9
TWI73G0962 Tripterygium wilfordii HOM05D005999 ORTHO05D003360 8.5e-06 54.7 34 67.6


User provided reference genes

Program Settings