Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G1301 Cannabis sativa HOM05D012404 ORTHO05D002765 1.3e-117 426.4 217 100.0
CANSAT64G1942 Cannabis sativa HOM05D000017 ORTHO05D000013 8.5e-117 423.7 216 99.5
CANSAT25G1873 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-114 415.2 216 97.7
CANSAT54G1378 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-67 260.0 141 95.7
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 3.2e-47 192.6 212 47.6
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 2.8e-43 179.5 217 45.2
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-42 176.4 217 44.2
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-39 166.4 218 39.9
CANSAT21G1471 Cannabis sativa HOM05D000017 ORTHO05D000013 3.2e-39 166.0 218 40.4
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-38 164.1 218 39.9
CANSAT64G0129 Cannabis sativa HOM05D000017 ORTHO05D000013 6.5e-24 115.2 114 48.2
CANSAT54G0823 Cannabis sativa HOM05D000017 ORTHO05D000013 9.3e-23 111.3 108 46.3
CANSAT56G0158 Cannabis sativa HOM05D000003 ORTHO05D000004 6.1e-22 108.6 100 51.0
Oeu034871.1 Olea europaea HOM05D000017 ORTHO05D000013 4.1e-18 95.9 196 29.1
Oeu009493.1 Olea europaea HOM05D012404 ORTHO05D002765 2.6e-17 93.2 223 27.8
Oeu019782.1 Olea europaea HOM05D012404 ORTHO05D002765 2.6e-17 93.2 223 27.8
Oeu059246.1 Olea europaea HOM05D012404 ORTHO05D002765 4.5e-17 92.4 226 26.1
CANSAT78G0171 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-16 91.3 239 26.8
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 1.4e-15 87.4 223 26.5
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 5.5e-15 85.5 250 25.6
Sopen01g037270 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-14 84.0 214 29.9
Sopen11g029160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-14 84.0 214 29.9
CANSAT64G3012 Cannabis sativa HOM05D000017 ORTHO05D000013 2.1e-14 83.6 85 45.9
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.1e-14 82.0 212 29.7
CANSAT01G0559 Cannabis sativa HOM05D000017 ORTHO05D000013 7.9e-14 81.6 147 34.7
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 7.9e-14 81.6 263 26.2
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.9e-14 81.6 218 29.4
CANSAT35G0433 Cannabis sativa HOM05D012404 ORTHO05D002765 1.0e-13 81.3 218 27.1
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 1.8e-13 80.5 251 27.1
CANSAT35G0692 Cannabis sativa HOM05D010396 ORTHO05D002765 3.9e-13 79.3 242 28.5
CANSAT80G2780 Cannabis sativa HOM05D000017 ORTHO05D000013 3.9e-13 79.3 88 45.5
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.9e-13 79.3 205 29.8
Sopen06g004080 Solanum pennellii HOM05D000017 ORTHO05D000013 3.9e-13 79.3 214 29.4
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.8e-13 78.2 214 29.4
Sopen03g030620 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-12 77.8 214 29.0
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.6e-12 76.6 220 29.1
Sopen09g012340 Solanum pennellii HOM05D006864 ORTHO05D000013 3.3e-12 76.3 214 29.0
Oeu002184.1 Olea europaea HOM05D012404 ORTHO05D002765 7.4e-12 75.1 211 25.6
CANSAT25G1793 Cannabis sativa HOM05D000017 ORTHO05D000013 4.8e-11 72.4 213 27.7
Oeu009472.1 Olea europaea HOM05D012404 ORTHO05D002765 1.8e-10 70.5 118 28.8
Oeu063037.1 Olea europaea HOM05D012404 ORTHO05D002765 2.4e-10 70.1 118 29.7
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.1e-10 69.3 98 35.7
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.1e-10 69.3 213 25.8
Nitab4.5_0006179g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.3e-10 68.9 213 27.7
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.3e-10 68.9 198 28.8
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.1e-10 68.2 216 28.2
Sopen05g006380 Solanum pennellii HOM05D000017 ORTHO05D000013 9.1e-10 68.2 217 24.9
CANSAT54G0083 Cannabis sativa HOM05D010396 ORTHO05D000013 1.2e-09 67.8 267 26.6
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-09 67.8 228 25.0
Sopen02g001070 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-09 67.8 213 23.9
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 1.2e-09 67.8 213 23.9
Sopen06g002940 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-09 67.8 213 23.9
Sopen12g019990 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-09 67.8 213 23.9
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.5e-09 67.4 98 34.7
Sopen06g004330 Solanum pennellii HOM05D000017 ORTHO05D000013 1.5e-09 67.4 217 24.9
Sopen09g007640 Solanum pennellii HOM05D000017 ORTHO05D000013 1.5e-09 67.4 211 25.6
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-09 67.0 212 25.0
Sopen10g005080 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-09 66.6 213 23.5
CANSAT78G1212 Cannabis sativa HOM05D000017 ORTHO05D000013 4.5e-09 65.9 69 46.4
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.5e-09 65.9 216 24.5
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.5e-09 65.9 216 25.0
Oeu038186.1 Olea europaea HOM05D012404 ORTHO05D002765 4.5e-09 65.9 118 28.0
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.9e-09 65.5 216 27.8
CANSAT35G1887 Cannabis sativa HOM05D000017 ORTHO05D000013 7.7e-09 65.1 239 23.0
Nitab4.5_0000516g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.7e-09 65.1 216 26.4
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.0e-08 64.7 210 26.2
Oeu043717.1 Olea europaea HOM05D012404 ORTHO05D002765 1.0e-08 64.7 186 24.7
Oeu053795.1 Olea europaea HOM05D012404 ORTHO05D002765 1.0e-08 64.7 118 26.3
CANSAT54G1096 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-08 64.3 240 22.9
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-08 64.3 213 24.9
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-08 63.9 184 27.2
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.2e-08 63.5 216 23.6
Oeu044344.1 Olea europaea HOM05D012404 ORTHO05D002765 2.2e-08 63.5 118 27.1
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.9e-08 63.2 213 24.9
Nitab4.5_0020188g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.8e-08 62.8 98 33.7
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 5.0e-08 62.4 224 25.0
Sopen08g017470 Solanum pennellii HOM05D000017 ORTHO05D000013 5.0e-08 62.4 172 29.7
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 6.5e-08 62.0 226 23.5
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 8.5e-08 61.6 216 24.5
CANSAT21G1475 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-07 61.2 59 49.2
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.9e-07 60.5 217 22.6
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 1.9e-07 60.5 167 28.1
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.5e-07 60.1 220 22.3
Nitab4.5_0024513g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.2e-07 59.3 217 28.6
CANSAT80G0794 Cannabis sativa HOM05D010396 ORTHO05D002765 5.5e-07 58.9 110 30.0
Nitab4.5_0001030g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.5e-07 58.9 213 24.9
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.2e-07 58.5 213 23.0
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.4e-07 58.2 186 24.7
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.4e-07 58.2 214 28.0
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-06 57.8 99 30.3
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-06 57.8 99 30.3
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-06 57.8 99 30.3
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-06 57.8 215 26.0
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.2e-06 57.8 212 22.2
CANSAT01G2097 Cannabis sativa HOM05D010396 ORTHO05D002765 2.1e-06 57.0 110 29.1
CANSAT11G2236 Cannabis sativa HOM05D010396 ORTHO05D002765 2.1e-06 57.0 110 29.1
CANSAT21G1820 Cannabis sativa HOM05D010396 ORTHO05D002765 2.1e-06 57.0 110 29.1
CANSAT35G0346 Cannabis sativa HOM05D010396 ORTHO05D002765 2.1e-06 57.0 110 29.1
CANSAT25G3667 Cannabis sativa HOM05D000017 ORTHO05D000013 2.7e-06 56.6 74 39.2
CANSAT64G1880 Cannabis sativa HOM05D010396 ORTHO05D002765 2.7e-06 56.6 110 29.1
Oeu041330.1 Olea europaea HOM05D000017 ORTHO05D000013 2.7e-06 56.6 153 27.5
PGSC0003DMG400009287 Solanum tuberosum HOM05D006864 ORTHO05D002765 2.7e-06 56.6 127 27.6
CANSAT54G1361 Cannabis sativa HOM05D000017 ORTHO05D000013 3.6e-06 56.2 225 23.1
Nitab4.5_0003288g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.6e-06 56.2 212 23.1
CANSAT35G0400 Cannabis sativa HOM05D010396 ORTHO05D002765 4.7e-06 55.8 136 27.9
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.7e-06 55.8 213 23.0
Sopen04g019350 Solanum pennellii HOM05D006864 ORTHO05D000013 4.7e-06 55.8 133 28.6
CANSAT25G1832 Cannabis sativa HOM05D010396 ORTHO05D002765 6.1e-06 55.5 110 28.2
Sopen11g019130 Solanum pennellii HOM05D000047 ORTHO05D000589 6.1e-06 55.5 198 24.2
CANSAT80G0333 Cannabis sativa HOM05D000017 ORTHO05D000013 7.9e-06 55.1 79 43.0


User provided reference genes

Program Settings