Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G1256 Cannabis sativa HOM05D007456 ORTHO05D028426 1.4e-53 214.9 105 100.0
Haze_00583 Corylus avellana HOM05D007456 ORTHO05D009411 2.1e-12 78.2 120 40.0
Gorai.012G086600 Gossypium raimondii HOM05D007456 ORTHO05D009411 8.6e-11 72.8 78 44.9
RcHm_v2.0_Chr1g0383591 Rosa chinensis HOM05D007456 ORTHO05D009411 3.3e-10 70.9 101 36.6
CiPaw.06G020600 Carya illinoinensis HOM05D007456 ORTHO05D009411 7.3e-10 69.7 71 46.5
Gohir.A05G338400 Gossypium hirsutum HOM05D007456 ORTHO05D009411 7.3e-10 69.7 85 42.4
Gohir.D04G076800 Gossypium hirsutum HOM05D007456 ORTHO05D009411 9.6e-10 69.3 60 53.3
Prupe.2G323300 Prunus persica HOM05D007456 ORTHO05D009411 1.2e-09 68.9 94 37.2
Cfa015911 Carpinus fangiana HOM05D007456 ORTHO05D009411 2.8e-09 67.8 120 39.2
Ciclev10011504m.g Citrus clementina HOM05D007456 ORTHO05D009411 4.7e-09 67.0 80 46.2
QL09p026466 Quercus lobata HOM05D007456 ORTHO05D009411 6.2e-09 66.6 71 45.1
QL09p026540 Quercus lobata HOM05D007456 ORTHO05D009411 6.2e-09 66.6 71 45.1
FAN01G1025 Fragaria x ananassa HOM05D007456 ORTHO05D009411 1.1e-08 65.9 114 36.8
LjContig00222g0011827 Lotus japonicus HOM05D007456 ORTHO05D009411 1.1e-08 65.9 112 35.7
Thecc.05G207800 Theobroma cacao HOM05D007456 ORTHO05D009411 1.1e-08 65.9 78 42.3
RcHm_v2.0_Chr1g0383651 Rosa chinensis HOM05D007456 ORTHO05D009411 1.4e-08 65.5 121 32.2
FAN03G3193 Fragaria x ananassa HOM05D007456 ORTHO05D009411 6.8e-08 63.2 114 36.0
FAN10G3274 Fragaria x ananassa HOM05D007456 ORTHO05D009411 8.9e-08 62.8 114 34.2
FAN10G0306 Fragaria x ananassa HOM05D007456 ORTHO05D009411 1.5e-07 62.0 114 35.1
Oeu055445.1 Olea europaea HOM05D007456 ORTHO05D009411 1.5e-07 62.0 44 59.1
CAN.G128.20 Capsicum annuum HOM05D007456 ORTHO05D009411 3.4e-07 60.8 45 55.6
Lj9A258G53 Lonicera japonica HOM05D007456 ORTHO05D009411 3.4e-07 60.8 94 34.0
Peaxi162Scf00398g00211 Petunia axillaris HOM05D007456 ORTHO05D009411 3.4e-07 60.8 44 56.8
Sopen10g030890 Solanum pennellii HOM05D007456 ORTHO05D009411 3.4e-07 60.8 112 36.6
PSO782G5634 Papaver somniferum HOM05D035557 ORTHO05D028426 4.4e-07 60.5 85 40.0
MD01G1232900 Malus domestica HOM05D007456 ORTHO05D009411 5.8e-07 60.1 118 32.2
FvH4_7g33530 Fragaria vesca HOM05D007456 ORTHO05D009411 7.6e-07 59.7 114 34.2
Glyma.01G230600 Glycine max HOM05D007456 ORTHO05D009411 9.9e-07 59.3 94 37.2
PSO063G1989 Papaver somniferum HOM05D035557 ORTHO05D028426 9.9e-07 59.3 75 42.7
PGSC0003DMG400023682 Solanum tuberosum HOM05D007456 ORTHO05D009411 9.9e-07 59.3 112 35.7
Dinv11972 Davidia involucrata HOM05D007456 ORTHO05D009411 2.2e-06 58.2 57 45.6
Glyma.11G013600 Glycine max HOM05D007456 ORTHO05D009411 2.2e-06 58.2 74 44.6
Manes.08G164911 Manihot esculenta HOM05D007456 ORTHO05D009411 8.4e-06 56.2 44 54.5
Hund09765 Selenicereus undatus HOM05D007456 ORTHO05D009411 8.4e-06 56.2 79 39.2


User provided reference genes

Program Settings