Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G1253 Cannabis sativa HOM05D000256 ORTHO05D000119 4.9e-93 344.4 162 100.0
TAR623G1688 Trochodendron aralioides HOM05D000256 ORTHO05D000119 9.7e-25 117.5 110 48.2
CiPaw.13G128600 Carya illinoinensis HOM05D000256 ORTHO05D000119 2.2e-24 116.3 108 48.1
MSTRG.12394 Avicennia marina HOM05D000256 ORTHO05D000119 4.1e-23 112.1 107 51.4
CAN.G742.38 Capsicum annuum HOM05D000256 ORTHO05D000119 4.5e-22 108.6 139 43.2
Migut.N02440 Erythranthe guttata HOM05D000256 ORTHO05D000119 8.5e-21 104.4 109 45.0
Nitab4.5_0004762g0080 Nicotiana tabacum HOM05D000256 ORTHO05D000119 1.1e-20 104.0 142 35.9
CSS0050460 Camellia sinensis var. sinensis HOM05D000256 ORTHO05D000119 2.1e-19 99.8 128 41.4
CAN.G742.37 Capsicum annuum HOM05D000256 ORTHO05D000119 4.7e-19 98.6 109 43.1
Aqoxy7G01491 Aquilegia oxysepala HOM05D000256 ORTHO05D000119 1.8e-18 96.7 107 41.1
QL01p019403 Quercus lobata HOM05D000256 ORTHO05D000119 2.3e-18 96.3 96 44.8
Nn6g34635 Nelumbo nucifera HOM05D000256 ORTHO05D000119 4.0e-18 95.5 105 43.8
unitig_699.g19174 Utricularia gibba HOM05D000256 ORTHO05D000119 4.0e-18 95.5 128 39.1
Solyc11g071900.1 Solanum lycopersicum HOM05D000256 ORTHO05D000119 1.2e-17 94.0 109 39.4
TAR623G1279 Trochodendron aralioides HOM05D000256 ORTHO05D000119 1.5e-17 93.6 105 41.9
QL07p027457 Quercus lobata HOM05D000256 ORTHO05D000119 4.4e-17 92.0 109 37.6
TWI81G0897 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 4.4e-17 92.0 104 43.3
Sc22g0002900 Simmondsia chinensis HOM05D000256 ORTHO05D000119 2.2e-16 89.7 123 39.8
Cpa.g.sc104.9 Carica papaya HOM05D000545 ORTHO05D004272 8.3e-16 87.8 109 37.6
Cc04_g12620 Coffea canephora HOM05D000256 ORTHO05D000119 8.3e-16 87.8 121 34.7
Haze_20148 Corylus avellana HOM05D000256 ORTHO05D000119 1.8e-15 86.7 94 39.4
Sopen11g029570 Solanum pennellii HOM05D000256 ORTHO05D000119 1.8e-15 86.7 95 40.0
Cc04_g12610 Coffea canephora HOM05D000256 ORTHO05D000119 4.1e-15 85.5 121 33.9
Haze_20146 Corylus avellana HOM05D000256 ORTHO05D000119 4.1e-15 85.5 94 39.4
SGA_v2.0_scaffold268G46205 Striga asiatica HOM05D000256 ORTHO05D000119 4.1e-15 85.5 122 36.1
Hma1.2p1_0691F.1_g204070 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 7.0e-15 84.7 136 35.3
Manes.09G044300 Manihot esculenta HOM05D000256 ORTHO05D000119 5.9e-14 81.6 109 34.9
Manes.01G048300 Manihot esculenta HOM05D000256 ORTHO05D000119 3.8e-13 79.0 109 36.7
COL.COLO4_17920 Corchorus olitorius HOM05D000256 ORTHO05D000119 5.0e-13 78.6 112 37.5
Eucgr.B02182 Eucalyptus grandis HOM05D000256 ORTHO05D000119 6.5e-13 78.2 104 39.4
Eucgr.L01080 Eucalyptus grandis HOM05D000256 ORTHO05D000119 6.5e-13 78.2 104 39.4
MBI18_g28934_MAGBIO Magnolia biondii HOM05D000256 ORTHO05D000119 6.5e-13 78.2 119 38.7
Atru.chr4.3198 Acer truncatum HOM05D000256 ORTHO05D000119 8.5e-13 77.8 108 35.2
TAR633G1870 Trochodendron aralioides HOM05D000256 ORTHO05D000119 1.5e-12 77.0 124 36.3
Ciclev10023727m.g Citrus clementina HOM05D000256 ORTHO05D000119 3.2e-12 75.9 88 40.9
Actinidia25723 Actinidia chinensis HOM05D000256 ORTHO05D000119 4.2e-12 75.5 136 33.1
Thecc.02G043800 Theobroma cacao HOM05D000256 ORTHO05D000119 4.2e-12 75.5 103 37.9
Aqoxy5G00764 Aquilegia oxysepala HOM05D000256 ORTHO05D000119 5.5e-12 75.1 103 35.9
Gorai.005G259300 Gossypium raimondii HOM05D000256 ORTHO05D000119 5.5e-12 75.1 127 33.1
Potri.010G008300 Populus trichocarpa HOM05D000256 ORTHO05D000119 5.5e-12 75.1 130 34.6
TAR365G1093 Trochodendron aralioides HOM05D000256 ORTHO05D000119 2.7e-11 72.8 79 40.5
Duzib052G0546 Durio zibethinus HOM05D000256 ORTHO05D000119 3.6e-11 72.4 104 34.6
Nitab4.5_0004762g0090 Nicotiana tabacum HOM05D000256 ORTHO05D000119 3.6e-11 72.4 60 51.7
ATR0693G139 Amborella trichopoda HOM05D000256 ORTHO05D000119 8.0e-11 71.2 106 30.2
Lj2g0009295 Lotus japonicus HOM05D000256 ORTHO05D000119 1.4e-10 70.5 151 31.1
PGR031G0330 Punica granatum HOM05D000256 ORTHO05D000119 2.3e-10 69.7 105 35.2
PSO210G2317 Papaver somniferum HOM05D000256 ORTHO05D000119 1.5e-09 67.0 102 36.3
Medtr4g123577 Medicago truncatula HOM05D000256 ORTHO05D000119 2.6e-09 66.2 101 34.7
Phvul.003G125200 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 3.4e-09 65.9 102 35.3
Glyma.13G116500 Glycine max HOM05D000256 ORTHO05D000119 1.7e-08 63.5 119 31.9
COL.COLO4_10970 Corchorus olitorius HOM05D000256 ORTHO05D000119 2.8e-08 62.8 134 30.6
VMungo0420G0002 Vigna mungo HOM05D000256 ORTHO05D000119 2.8e-08 62.8 150 30.7
Cpa.g.sc146.2 Carica papaya HOM05D000256 ORTHO05D000119 4.1e-07 58.9 130 30.8
GSVIVG01014884001 Vitis vinifera HOM05D000256 ORTHO05D000119 4.1e-07 58.9 94 31.9
vmacro22823 Vaccinium macrocarpon HOM05D000256 ORTHO05D000119 9.2e-07 57.8 89 34.8
Thhalv10015241m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 1.2e-06 57.4 107 34.6
Thecc.04G096600 Theobroma cacao HOM05D000256 ORTHO05D000119 1.2e-06 57.4 124 29.8
CARHR259490 Cardamine hirsuta HOM05D000256 ORTHO05D000119 3.5e-06 55.8 92 38.0
Glyma.08G353300 Glycine max HOM05D000256 ORTHO05D000119 4.5e-06 55.5 109 30.3
Lalb_Chr05g0219511 Lupinus albus HOM05D000256 ORTHO05D000119 4.5e-06 55.5 106 26.4
GSVIVG01014872001 Vitis vinifera HOM05D000256 ORTHO05D000119 4.5e-06 55.5 103 30.1


User provided reference genes

Program Settings