Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 1.4e-229 799.3 399 100.0
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 8.2e-174 614.0 397 76.8
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 1.2e-172 610.1 390 77.9
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 1.2e-172 610.1 389 78.4
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 1.5e-172 609.8 406 77.3
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 3.4e-172 608.6 395 77.7
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 5.8e-172 607.8 392 77.3
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 7.6e-172 607.4 388 78.4
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 8.4e-171 604.0 403 75.7
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 1.4e-170 603.2 389 77.4
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 3.2e-170 602.1 392 76.5
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 4.2e-170 601.7 396 75.0
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 4.6e-169 598.2 391 75.2
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 3.0e-168 595.5 403 74.7
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 8.7e-168 594.0 392 75.8
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 3.3e-167 592.0 391 74.9
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 4.3e-167 591.7 383 77.8
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.6e-166 589.7 386 75.4
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 6.3e-166 587.8 389 75.3
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 1.1e-165 587.0 387 74.9
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 3.1e-165 585.5 399 73.9
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 1.2e-164 583.6 395 73.9
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 5.9e-164 581.3 361 78.4
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 5.9e-164 581.3 385 75.3
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 7.7e-164 580.9 404 72.3
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 1.0e-163 580.5 399 73.7
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 1.0e-163 580.5 402 75.4
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 1.7e-163 579.7 396 74.0
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 1.7e-163 579.7 395 73.9
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 2.2e-163 579.3 385 74.8
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 2.9e-163 578.9 395 72.4
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 3.8e-163 578.6 409 73.1
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 5.0e-163 578.2 396 74.5
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 5.0e-163 578.2 396 74.2
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 6.5e-163 577.8 387 75.7
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 1.4e-162 576.6 378 75.4
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.9e-162 576.2 398 73.4
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 5.5e-162 574.7 388 74.7
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 7.2e-162 574.3 397 72.3
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 9.4e-162 573.9 391 73.7
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.6e-161 573.2 392 73.2
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 2.1e-161 572.8 405 71.9
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 4.6e-161 571.6 383 73.6
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.0e-160 570.5 343 81.3
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 2.3e-160 569.3 390 72.3
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 2.3e-160 569.3 343 81.0
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 2.3e-160 569.3 343 81.0
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 3.0e-160 568.9 401 72.6
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.0e-160 568.9 343 81.3
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 3.9e-160 568.5 390 72.8
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 5.1e-160 568.2 333 82.6
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 5.1e-160 568.2 399 72.2
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 5.1e-160 568.2 405 71.4
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 8.8e-160 567.4 353 77.1
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 1.1e-159 567.0 405 71.1
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 2.0e-159 566.2 383 72.3
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 2.0e-159 566.2 372 75.0
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 2.0e-159 566.2 372 75.0
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 2.0e-159 566.2 444 66.7
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 2.5e-159 565.8 381 73.5
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 4.3e-159 565.1 400 71.8
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 7.4e-159 564.3 394 70.6
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 9.7e-159 563.9 338 79.9
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 1.7e-158 563.1 378 74.1
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 3.7e-158 562.0 362 75.4
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 4.8e-158 561.6 397 71.5
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 4.8e-158 561.6 409 71.9
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 8.2e-158 560.8 408 69.4
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 8.2e-158 560.8 374 74.1
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 1.8e-157 559.7 355 76.3
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 1.8e-157 559.7 355 76.3
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 1.8e-157 559.7 375 73.9
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 1.5e-156 556.6 343 77.8
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 2.0e-156 556.2 395 70.4
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 2.6e-156 555.8 407 69.8
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 1.7e-155 553.1 403 69.0
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 2.2e-155 552.7 402 70.1
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.1e-154 550.4 337 80.1
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.9e-154 549.7 390 70.5
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 1.9e-154 549.7 366 74.3
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 5.5e-154 548.1 402 69.2
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 7.2e-154 547.7 426 65.3
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 6.1e-153 544.7 397 69.8
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 1.0e-152 543.9 385 70.6
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 2.3e-152 542.7 391 68.5
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 3.9e-152 542.0 375 70.4
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 5.1e-152 541.6 371 73.3
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 6.7e-152 541.2 388 71.4
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 1.7e-150 536.6 410 69.5
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 3.7e-150 535.4 325 78.2
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 1.1e-149 533.9 389 68.6
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 2.4e-149 532.7 393 67.7
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 1.7e-147 526.6 419 64.9
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 1.0e-144 517.3 404 66.3
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 1.3e-142 510.4 299 82.9
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.3e-142 510.4 368 70.4
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 8.2e-142 507.7 365 71.2
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.6e-140 503.4 379 69.4
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 6.5e-139 498.0 336 73.2
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 5.5e-138 495.0 402 65.9
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 1.2e-135 487.3 335 74.0
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 2.2e-134 483.0 324 71.6
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 4.8e-134 481.9 393 63.6
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 1.8e-133 479.9 354 67.8
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 6.8e-128 461.5 364 64.0
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.6e-127 459.5 323 69.7
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 1.0e-123 447.6 336 64.6
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 1.2e-116 424.1 270 78.1
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 1.6e-113 413.7 279 72.8
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 8.0e-113 411.4 307 68.7
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 1.2e-108 397.5 330 63.0
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 6.8e-88 328.6 296 53.7
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 2.4e-85 320.1 336 50.0
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 1.3e-83 314.3 303 50.5
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 2.4e-80 303.5 306 55.6
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 6.0e-76 288.9 245 60.0
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 6.0e-68 262.3 181 74.0
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 9.0e-56 221.9 189 61.4
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 7.9e-52 208.8 130 73.8
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 3.3e-42 176.8 118 76.3
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.3e-33 148.3 102 70.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.7e-25 121.3 134 53.0
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 1.6e-20 104.8 89 61.8
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.7e-20 104.0 106 51.9
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.0e-19 102.1 161 38.5
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 8.8e-19 99.0 74 68.9
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 2.4e-16 90.9 65 66.2


User provided reference genes

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