Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 0.0e+00 1428.7 749 100.0
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 1.4e-174 617.5 766 48.7
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 4.9e-172 609.0 698 51.3
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 8.2e-159 565.1 762 47.1
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 2.1e-154 550.4 752 46.0
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.3e-153 547.7 745 47.4
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.9e-152 543.9 742 46.2
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 9.7e-152 541.6 757 46.0
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 4.3e-144 516.2 804 42.9
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 9.7e-144 515.0 751 44.9
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 8.2e-143 511.9 720 45.1
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 4.1e-142 509.6 749 44.9
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 9.1e-142 508.4 753 45.8
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 1.1e-139 501.5 764 43.5
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 1.2e-138 498.0 731 47.1
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 1.1e-136 491.5 761 43.1
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 7.4e-136 488.8 759 44.5
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 9.7e-136 488.4 558 50.9
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 6.3e-135 485.7 761 42.8
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 7.7e-133 478.8 816 42.0
ClCG03G011330 Citrullus lanatus HOM05D006063 ORTHO05D000023 2.5e-131 473.8 823 41.8
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 1.6e-130 471.1 751 41.4
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 2.3e-129 467.2 767 42.9
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 6.3e-127 459.1 762 43.4
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 1.1e-123 448.4 615 44.2
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 1.9e-123 447.6 772 41.7
THA.LOC104820746 Tarenaya hassleriana HOM05D006063 ORTHO05D000023 3.0e-121 440.3 716 40.5
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 1.3e-119 434.9 739 41.8
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 1.8e-118 431.0 750 42.3
PSO063G1700 Papaver somniferum HOM05D006063 ORTHO05D000023 4.1e-118 429.9 739 41.0
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 4.5e-117 426.4 706 40.8
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 7.7e-117 425.6 661 40.7
PSO017G2613 Papaver somniferum HOM05D006063 ORTHO05D000023 3.8e-116 423.3 713 40.8
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 6.5e-116 422.5 776 39.3
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 4.2e-115 419.9 699 40.2
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 4.2e-115 419.9 660 42.3
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 5.5e-115 419.5 662 43.5
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 2.7e-114 417.2 704 38.6
Cc09_g03150 Coffea canephora HOM05D006063 ORTHO05D000023 2.3e-113 414.1 618 41.7
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 3.0e-113 413.7 620 42.6
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 1.2e-112 411.8 744 40.3
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 2.2e-111 407.5 664 41.6
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 3.7e-111 406.8 717 39.9
BcaB04g19349 Brassica carinata HOM05D006063 ORTHO05D000023 6.3e-111 406.0 735 39.3
EL10Ac4g09796 Beta vulgaris HOM05D006063 ORTHO05D000023 2.7e-109 400.6 699 41.1
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 2.9e-108 397.1 540 46.3
Glyma.10G169000 Glycine max HOM05D006063 ORTHO05D000023 2.9e-108 397.1 722 39.8
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 6.6e-108 396.0 707 39.3
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 8.6e-108 395.6 698 39.4
VMungo0720G1344 Vigna mungo HOM05D006063 ORTHO05D000023 1.6e-106 391.3 737 38.5
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 6.1e-106 389.4 738 38.2
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 1.8e-105 387.9 737 39.2
Lalb_Chr21g0311331 Lupinus albus HOM05D006063 ORTHO05D000023 1.5e-104 384.8 706 39.7
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 2.9e-103 380.6 735 37.6
Phvul.L001648 Phaseolus vulgaris HOM05D006063 ORTHO05D000023 3.7e-103 380.2 720 37.4
A03p33520 Brassica napus HOM05D006063 ORTHO05D000023 1.1e-102 378.6 616 40.3
AUR62005299 Chenopodium quinoa HOM05D006063 ORTHO05D000765 1.4e-102 378.3 481 44.9
CiPaw.07G075500 Carya illinoinensis HOM05D006063 ORTHO05D000023 1.8e-102 377.9 514 47.9
C03p40730 Brassica napus HOM05D006063 ORTHO05D000023 7.0e-102 375.9 731 36.3
Peaxi162Scf00071g01413 Petunia axillaris HOM05D006063 ORTHO05D000023 9.2e-102 375.6 588 45.1
BraA03t12527Z Brassica rapa HOM05D006063 ORTHO05D000023 1.6e-101 374.8 616 40.1
Lsat_1_v5_gn_9_46040 Lactuca sativa HOM05D006063 ORTHO05D000023 6.6e-100 369.4 667 39.3
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 3.3e-99 367.1 698 39.0
SalBow1G3325 Salvia bowleyana HOM05D006063 ORTHO05D000023 5.6e-99 366.3 663 40.0
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 7.3e-99 365.9 564 42.2
BcaC01g04385 Brassica carinata HOM05D006063 ORTHO05D000023 1.2e-98 365.2 623 39.8
arahy.Tifrunner.gnm1.ann1.2N7XA4 Arachis hypogaea HOM05D006063 ORTHO05D000023 2.1e-98 364.4 625 40.8
SHI14775 Sapria himalayana HOM05D006063 ORTHO05D000023 2.8e-98 364.0 488 43.0
Lj3g0014127 Lotus japonicus HOM05D006063 ORTHO05D000023 3.6e-98 363.6 720 36.9
BolC3t16339H Brassica oleracea HOM05D006063 ORTHO05D000023 4.7e-98 363.2 579 39.7
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 2.3e-97 360.9 814 35.0
HanXRQChr15g0491401 Helianthus annuus HOM05D006063 ORTHO05D000023 2.3e-97 360.9 664 39.0
arahy.Tifrunner.gnm1.ann1.JVQ2Z4 Arachis hypogaea HOM05D006063 ORTHO05D000023 1.5e-96 358.2 625 40.0
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 4.4e-96 356.7 643 38.9
SalBow1G1068 Salvia bowleyana HOM05D006063 ORTHO05D000023 4.4e-96 356.7 684 38.3
Dinv03784 Davidia involucrata HOM05D006063 ORTHO05D000023 1.7e-92 344.7 444 46.4
Lj2A50T27 Lonicera japonica HOM05D006063 ORTHO05D000023 1.9e-91 341.3 402 50.0
Ca_09979_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 4.3e-91 340.1 726 36.0
Ca_09995_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 4.3e-91 340.1 726 36.0
SGA_v2.0_scaffold62G21476 Striga asiatica HOM05D006063 ORTHO05D000023 1.8e-89 334.7 609 38.3
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 2.2e-87 327.8 376 50.0
Hma1.2p1_0153F.1_g067880 Hydrangea macrophylla HOM05D006063 ORTHO05D000023 1.9e-86 324.7 458 43.9
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 1.1e-83 315.5 705 37.2
Medtr1g079470 Medicago truncatula HOM05D006063 ORTHO05D000023 1.5e-83 315.1 710 35.4
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 1.1e-81 308.9 397 47.9
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 5.8e-80 303.1 402 46.5
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 2.1e-77 294.7 866 32.0
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 4.6e-77 293.5 539 40.1
Atru.chr2.1232 Acer truncatum HOM05D006063 ORTHO05D000023 3.3e-67 260.8 397 43.1
FvH4_5g38930 Fragaria vesca HOM05D006063 ORTHO05D000023 5.3e-57 226.9 270 51.1
Mapoly0001s0430 Marchantia polymorpha HOM05D006063 ORTHO05D000023 9.0e-57 226.1 703 28.7
Zm00001eb086400 Zea mays HOM05D006063 ORTHO05D000023 5.8e-56 223.4 484 35.7
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 2.2e-55 221.5 272 48.9
A05p43190 Brassica napus HOM05D006063 ORTHO05D000023 4.2e-54 217.2 301 42.9
AagrBONN_evm.TU.Sc2ySwM_362.520 Anthoceros agrestis HOM05D006063 ORTHO05D000023 1.6e-53 215.3 556 31.5
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.3e-52 212.2 543 34.1
TPR.G10281 Trifolium pratense HOM05D006063 ORTHO05D000023 1.8e-52 211.8 372 37.9
ECA232G4499 Erigeron canadensis HOM05D006063 ORTHO05D000023 1.3e-50 205.7 448 37.3
GSVIVG01026370001 Vitis vinifera HOM05D006063 ORTHO05D000023 1.6e-50 205.3 270 48.5
Os04g0349401 Oryza sativa ssp. japonica HOM05D006063 ORTHO05D000023 4.0e-49 200.7 446 34.5
Pp3c17_4760 Physcomitrium patens HOM05D006063 ORTHO05D000023 2.6e-48 198.0 597 29.6
Psat6g141160 Pisum sativum HOM05D006063 ORTHO05D000023 3.8e-47 194.1 406 36.0
SMO351G0027 Selaginella moellendorffii HOM05D006063 ORTHO05D000023 1.2e-45 189.1 615 28.9
CDE05G2869 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 3.7e-42 177.6 302 38.7
Atru.chr2.1231 Acer truncatum HOM05D006063 ORTHO05D000023 1.8e-41 175.3 179 58.7
HPP92_006232 Vanilla planifolia HOM05D006063 ORTHO05D000023 3.1e-41 174.5 258 40.3
HPP92_006233 Vanilla planifolia HOM05D006063 ORTHO05D000023 1.6e-34 152.1 415 32.8
CDE05G3203 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 4.1e-33 147.5 269 39.4
DCAR_005531 Daucus carota HOM05D006063 ORTHO05D000023 1.6e-29 135.6 292 32.9
RcHm_v2.0_Chr3g0448831 Rosa chinensis HOM05D006063 ORTHO05D000023 2.7e-29 134.8 232 38.8
A05p43200 Brassica napus HOM05D000005 ORTHO05D000449 2.0e-27 128.6 269 43.1
CsaV3_1G044530 Cucumis sativus L. HOM05D006063 ORTHO05D000023 2.5e-27 128.3 119 62.2
SEGI_40887 Sequoiadendron giganteum HOM05D006063 ORTHO05D000023 8.5e-23 113.2 200 39.5
BraA05t23062Z Brassica rapa HOM05D006063 ORTHO05D000023 3.2e-22 111.3 78 69.2
Cpa.g.sc51.65 Carica papaya HOM05D006063 ORTHO05D000023 7.4e-19 100.1 294 29.9
MBI18_g46978_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 2.4e-17 95.1 269 34.6
FAN08G2149 Fragaria x ananassa HOM05D006063 ORTHO05D000023 9.1e-17 93.2 213 33.8
C05p62930 Brassica napus HOM05D000005 ORTHO05D000294 5.9e-16 90.5 178 36.5
TPR.G14651 Trifolium pratense HOM05D006063 ORTHO05D000023 3.3e-11 74.7 254 26.8
BcaC05g30213 Brassica carinata HOM05D006063 ORTHO05D000023 3.5e-08 64.7 48 68.8
FAN04G1450 Fragaria x ananassa HOM05D006063 ORTHO05D000023 7.7e-08 63.5 51 62.7
C05p62940 Brassica napus HOM05D000005 ORTHO05D000449 2.2e-07 62.0 116 40.5
Cpa.g.sc51.64 Carica papaya HOM05D006063 ORTHO05D000023 1.5e-06 59.3 118 39.0
Dinv03778 Davidia involucrata HOM05D006063 ORTHO05D045100 3.2e-06 58.2 131 35.1
Dinv03782 Davidia involucrata HOM05D006063 ORTHO05D045148 7.2e-06 57.0 40 70.0


User provided reference genes

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