Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G1122 Cannabis sativa HOM05D007662 ORTHO05D009666 4.0e-63 244.6 124 100.0
TAR623G1524 Trochodendron aralioides HOM05D007662 ORTHO05D009666 9.8e-17 90.5 64 71.9
Nitab4.5_0007654g0010 Nicotiana tabacum HOM05D007662 ORTHO05D009666 1.1e-15 87.0 71 64.8
Peaxi162Scf00451g00322 Petunia axillaris HOM05D007662 ORTHO05D009666 3.1e-15 85.5 60 71.7
Rhsim02G0233900 Rhododendron simsii HOM05D007662 ORTHO05D009666 1.2e-14 83.6 63 71.4
Solyc01g020320.3 Solanum lycopersicum HOM05D007662 ORTHO05D009666 1.2e-14 83.6 67 67.2
Lj1g0001682 Lotus japonicus HOM05D007662 ORTHO05D009666 2.0e-14 82.8 64 71.9
Cpa.g.sc119.89 Carica papaya HOM05D007662 ORTHO05D009666 2.7e-14 82.4 62 67.7
MD03G1011000 Malus domestica HOM05D007662 ORTHO05D009666 2.7e-14 82.4 74 60.8
Hma1.2p1_0972F.1_g242860 Hydrangea macrophylla HOM05D007662 ORTHO05D009666 4.5e-14 81.6 59 71.2
Nn7g35960 Nelumbo nucifera HOM05D007662 ORTHO05D009666 5.9e-14 81.3 63 69.8
Sopen01g015220 Solanum pennellii HOM05D007662 ORTHO05D009666 5.9e-14 81.3 67 65.7
Rhsim02G0233800 Rhododendron simsii HOM05D007662 ORTHO05D009666 1.3e-13 80.1 63 68.3
PGSC0003DMG400017905 Solanum tuberosum HOM05D007662 ORTHO05D009666 1.3e-13 80.1 62 66.1
CSS0010518 Camellia sinensis var. sinensis HOM05D007662 ORTHO05D009666 1.7e-13 79.7 66 63.6
Cc01_g01030 Coffea canephora HOM05D007662 ORTHO05D009666 1.7e-13 79.7 64 64.1
Peaxi162Scf00336g00087 Petunia axillaris HOM05D007662 ORTHO05D009666 3.8e-13 78.6 65 69.2
Sed0021510 Sechium edule HOM05D007662 ORTHO05D009666 3.8e-13 78.6 73 65.8
PGSC0003DMG400015999 Solanum tuberosum HOM05D007662 ORTHO05D009666 3.8e-13 78.6 55 70.9
MBI13_g29646_MAGBIO Magnolia biondii HOM05D007662 ORTHO05D009666 5.0e-13 78.2 61 70.5
Manes.15G104500 Manihot esculenta HOM05D007662 ORTHO05D009666 5.0e-13 78.2 63 68.3
Psat3g140280 Pisum sativum HOM05D007662 ORTHO05D009666 6.5e-13 77.8 61 68.9
AL3G53480 Arabidopsis lyrata HOM05D007662 ORTHO05D009666 8.5e-13 77.4 61 63.9
Glyma.18G180600 Glycine max HOM05D007662 ORTHO05D009666 8.5e-13 77.4 66 65.2
PSO384G2541 Papaver somniferum HOM05D007662 ORTHO05D009666 1.1e-12 77.0 65 64.6
Prupe.6G011500 Prunus persica HOM05D007662 ORTHO05D009666 1.1e-12 77.0 62 64.5
Haze_22992 Corylus avellana HOM05D007662 ORTHO05D009666 1.5e-12 76.6 62 58.1
Glyma.07G131900 Glycine max HOM05D007662 ORTHO05D009666 1.5e-12 76.6 62 69.4
Nitab4.5_0000488g0050 Nicotiana tabacum HOM05D007662 ORTHO05D009666 1.5e-12 76.6 55 69.1
Phvul.008G106450 Phaseolus vulgaris HOM05D007662 ORTHO05D009666 1.5e-12 76.6 67 62.7
Cfa009623 Carpinus fangiana HOM05D007662 ORTHO05D009666 1.9e-12 76.3 70 60.0
CARHR111030 Cardamine hirsuta HOM05D007662 ORTHO05D009666 3.2e-12 75.5 61 63.9
Carub.0003s3492 Capsella rubella HOM05D007662 ORTHO05D009666 4.2e-12 75.1 43 81.4
Medtr4g095740 Medicago truncatula HOM05D007662 ORTHO05D009666 4.2e-12 75.1 44 84.1
Aa31LG8G17430 Aethionema arabicum HOM05D007662 ORTHO05D009666 7.2e-12 74.3 66 62.1
Carub.0003s3490 Capsella rubella HOM05D007662 ORTHO05D009666 7.2e-12 74.3 61 60.7
Migut.N02119 Erythranthe guttata HOM05D007662 ORTHO05D009666 7.2e-12 74.3 72 59.7
FAN11G0548 Fragaria x ananassa HOM05D007662 ORTHO05D009666 7.2e-12 74.3 70 60.0
Lsat_1_v5_gn_6_51400 Lactuca sativa HOM05D007662 ORTHO05D009666 7.2e-12 74.3 47 74.5
CiPaw.12G007400 Carya illinoinensis HOM05D007662 ORTHO05D009666 9.4e-12 73.9 54 66.7
HanXRQChr02g0056871 Helianthus annuus HOM05D007662 ORTHO05D009666 9.4e-12 73.9 63 63.5
SalBow6G4367 Salvia bowleyana HOM05D007662 ORTHO05D009666 9.4e-12 73.9 64 62.5
SalBow8G2777 Salvia bowleyana HOM05D007662 ORTHO05D009666 9.4e-12 73.9 64 62.5
arahy.Tifrunner.gnm1.ann1.MELV6S Arachis hypogaea HOM05D007662 ORTHO05D009666 1.2e-11 73.6 44 81.8
FAN21G0034 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.2e-11 73.6 66 59.1
FAN25G2111 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.2e-11 73.6 66 59.1
RcHm_v2.0_Chr5g0081401 Rosa chinensis HOM05D007662 ORTHO05D009666 1.2e-11 73.6 73 57.5
arahy.Tifrunner.gnm1.ann1.0G84UH Arachis hypogaea HOM05D007662 ORTHO05D009666 1.6e-11 73.2 44 81.8
FAN16G0597 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.6e-11 73.2 66 59.1
Sabra01G0007400 Salix brachista HOM05D007662 ORTHO05D009666 1.6e-11 73.2 62 64.5
Gorai.004G017900 Gossypium raimondii HOM05D007662 ORTHO05D009666 2.1e-11 72.8 66 60.6
Potri.001G009501 Populus trichocarpa HOM05D007662 ORTHO05D009666 2.1e-11 72.8 63 60.3
Thhalv10002142m.g Eutrema salsugineum HOM05D007662 ORTHO05D009666 2.7e-11 72.4 67 56.7
Gohir.D08G022600 Gossypium hirsutum HOM05D007662 ORTHO05D009666 2.7e-11 72.4 66 60.6
PGR119G1192 Punica granatum HOM05D007662 ORTHO05D009666 2.7e-11 72.4 65 61.5
Duzib168G0137 Durio zibethinus HOM05D007662 ORTHO05D009666 3.6e-11 72.0 65 60.0
Gohir.A08G012100 Gossypium hirsutum HOM05D007662 ORTHO05D009666 3.6e-11 72.0 64 62.5
Lalb_Chr03g0042221 Lupinus albus HOM05D007662 ORTHO05D009666 3.6e-11 72.0 67 65.7
Atru.chr3.2207 Acer truncatum HOM05D007662 ORTHO05D009666 8.0e-11 70.9 62 62.9
AT2G20480 Arabidopsis thaliana HOM05D007662 ORTHO05D009666 1.0e-10 70.5 61 60.7
BcaC06g36736 Brassica carinata HOM05D007662 ORTHO05D009666 1.0e-10 70.5 61 62.3
BolC7t40501H Brassica oleracea HOM05D007662 ORTHO05D009666 1.0e-10 70.5 61 62.3
COL.COLO4_10450 Corchorus olitorius HOM05D007662 ORTHO05D009666 1.4e-10 70.1 41 82.9
Sp3g33680 Schrenkiella parvula HOM05D007662 ORTHO05D009666 1.4e-10 70.1 64 59.4
GSVIVG01025388001 Vitis vinifera HOM05D007662 ORTHO05D009666 1.8e-10 69.7 39 84.6
C07p00560 Brassica napus HOM05D007662 ORTHO05D009666 2.3e-10 69.3 61 60.7
DCAR_024358 Daucus carota HOM05D007662 ORTHO05D009666 2.3e-10 69.3 66 59.1
Aqoxy1G00152 Aquilegia oxysepala HOM05D007662 ORTHO05D009666 3.0e-10 68.9 43 74.4
C08p42210 Brassica napus HOM05D007662 ORTHO05D009666 3.0e-10 68.9 58 63.8
BolC8t51780H Brassica oleracea HOM05D007662 ORTHO05D009666 3.0e-10 68.9 58 63.8
Manes.04G126551 Manihot esculenta HOM05D007662 ORTHO05D009666 3.0e-10 68.9 60 66.7
Oeu002702.1 Olea europaea HOM05D007662 ORTHO05D009666 4.0e-10 68.6 38 86.8
TWI32G0733 Tripterygium wilfordii HOM05D007662 ORTHO05D009666 4.0e-10 68.6 62 56.5
ATR0598G132 Amborella trichopoda HOM05D007662 ORTHO05D009666 6.8e-10 67.8 59 59.3
BcaB03g16842 Brassica carinata HOM05D007662 ORTHO05D009666 6.8e-10 67.8 57 64.9
BcaB08g34910 Brassica carinata HOM05D007662 ORTHO05D009666 6.8e-10 67.8 61 60.7
BraA07t27819Z Brassica rapa HOM05D007662 ORTHO05D009666 6.8e-10 67.8 41 78.0
Thecc.09G214700 Theobroma cacao HOM05D007662 ORTHO05D009666 6.8e-10 67.8 61 63.9
Prupe.2G113800 Prunus persica HOM05D007662 ORTHO05D009666 8.8e-10 67.4 54 64.8
A07p00270 Brassica napus HOM05D007662 ORTHO05D009666 1.2e-09 67.0 41 78.0
ClCG02G023850 Citrullus lanatus HOM05D007662 ORTHO05D009666 2.0e-09 66.2 66 60.6
CsaV3_4G023520 Cucumis sativus L. HOM05D007662 ORTHO05D009666 2.6e-09 65.9 66 60.6
BcaC07g41215 Brassica carinata HOM05D007662 ORTHO05D009666 4.4e-09 65.1 58 62.1
A09p58880 Brassica napus HOM05D007662 ORTHO05D009666 4.4e-09 65.1 55 61.8
BraA09t41274Z Brassica rapa HOM05D007662 ORTHO05D009666 4.4e-09 65.1 55 61.8
unitig_8.g3321 Utricularia gibba HOM05D007662 ORTHO05D009666 4.4e-09 65.1 42 73.8
Eucgr.B02616 Eucalyptus grandis HOM05D007662 ORTHO05D009666 5.7e-09 64.7 36 88.9
Eucgr.L03549 Eucalyptus grandis HOM05D007662 ORTHO05D009666 5.7e-09 64.7 36 88.9
Os09g0446000 Oryza sativa ssp. japonica HOM05D007662 ORTHO05D009666 7.5e-09 64.3 37 78.4
Hund07566 Selenicereus undatus HOM05D007662 ORTHO05D009666 7.5e-09 64.3 71 50.7
ECA233G5312 Erigeron canadensis HOM05D007662 ORTHO05D009666 2.2e-08 62.8 38 76.3
HPP92_019156 Vanilla planifolia HOM05D007662 ORTHO05D009666 4.9e-08 61.6 43 65.1
Zm00001eb314380 Zea mays HOM05D007662 ORTHO05D009666 1.4e-07 60.1 62 56.5
EL10Ac4g10342 Beta vulgaris HOM05D007662 ORTHO05D009666 4.1e-07 58.5 48 62.5
SEGI_07868 Sequoiadendron giganteum HOM05D007662 ORTHO05D009666 1.2e-06 57.0 37 70.3


User provided reference genes

Program Settings