Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G1080 Cannabis sativa HOM05D006536 ORTHO05D005877 6.8e-66 253.8 127 100.0
CANSAT54G2394 Cannabis sativa HOM05D006536 ORTHO05D005877 1.2e-49 199.9 127 83.5
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 2.9e-24 115.5 108 56.5
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 1.5e-17 93.2 144 38.9
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 2.6e-17 92.4 152 37.5
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 1.9e-15 86.3 141 39.0
QL08p013066 Quercus lobata HOM05D006536 ORTHO05D005877 7.2e-15 84.3 129 41.9
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.2e-14 83.6 146 41.8
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 1.2e-14 83.6 137 37.2
PSO541G5532 Papaver somniferum HOM05D006536 ORTHO05D005877 2.7e-14 82.4 140 37.9
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 3.6e-14 82.0 136 38.2
Sopen07g032350 Solanum pennellii HOM05D006536 ORTHO05D005877 3.6e-14 82.0 98 43.9
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 6.1e-14 81.3 144 38.9
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 1.0e-13 80.5 143 36.4
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 1.0e-13 80.5 143 37.8
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 3.9e-13 78.6 142 35.9
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 3.9e-13 78.6 139 40.3
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 1.1e-12 77.0 141 37.6
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 1.1e-12 77.0 140 37.1
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 1.9e-12 76.3 143 37.8
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.5e-12 75.9 143 38.5
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.5e-12 75.9 97 41.2
AUR62015663 Chenopodium quinoa HOM05D009374 ORTHO05D005877 4.3e-12 75.1 125 36.0
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 7.4e-12 74.3 144 34.0
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 7.4e-12 74.3 96 40.6
PSO478G5239 Papaver somniferum HOM05D006536 ORTHO05D005877 7.4e-12 74.3 143 36.4
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 7.4e-12 74.3 140 35.7
PSO541G3913 Papaver somniferum HOM05D006536 ORTHO05D005877 1.3e-11 73.6 146 34.9
PSO675G9181 Papaver somniferum HOM05D006536 ORTHO05D005877 1.7e-11 73.2 140 36.4
AUR62020540 Chenopodium quinoa HOM05D009374 ORTHO05D005877 2.8e-11 72.4 123 34.1
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 2.8e-11 72.4 134 33.6
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 6.3e-11 71.2 140 37.9
CDE11G0063 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 8.2e-11 70.9 138 37.0
CDE11G0553 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 8.2e-11 70.9 140 38.6
Nitab4.5_0008018g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 8.2e-11 70.9 96 39.6
PSO541G2788 Papaver somniferum HOM05D006536 ORTHO05D005877 3.1e-10 68.9 134 35.1
Solyc07g064220.1 Solanum lycopersicum HOM05D006536 ORTHO05D005877 3.1e-10 68.9 104 35.6
Sopen07g032360 Solanum pennellii HOM05D006536 ORTHO05D005877 3.1e-10 68.9 143 33.6
Sopen07g032370 Solanum pennellii HOM05D006536 ORTHO05D005877 4.1e-10 68.6 134 35.1
Nitab4.5_0001479g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.3e-10 68.2 143 39.2
PSO017G6165 Papaver somniferum HOM05D006536 ORTHO05D005877 5.3e-10 68.2 90 41.1
ClCG09G018590 Citrullus lanatus HOM05D006536 ORTHO05D005877 6.9e-10 67.8 124 35.5
MELO3C025418.2 Cucumis melo HOM05D006536 ORTHO05D005877 6.9e-10 67.8 142 33.8
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 2.0e-09 66.2 145 29.0
Migut.J01035 Erythranthe guttata HOM05D006536 ORTHO05D005877 2.6e-09 65.9 109 36.7
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 3.4e-09 65.5 136 32.4
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 5.9e-09 64.7 143 33.6
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.0e-08 63.9 110 36.4
Eucgr.F00976 Eucalyptus grandis HOM05D006536 ORTHO05D005877 1.0e-08 63.9 147 33.3
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 1.7e-08 63.2 148 30.4
PGSC0003DMG400001052 Solanum tuberosum HOM05D006536 ORTHO05D005877 1.7e-08 63.2 67 38.8
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 2.9e-08 62.4 92 39.1
Nn1g07021 Nelumbo nucifera HOM05D023228 ORTHO05D005877 3.8e-08 62.0 140 32.1
SHI26638 Sapria himalayana HOM05D006536 ORTHO05D005877 3.8e-08 62.0 135 28.9
Lsat_1_v5_gn_3_115460 Lactuca sativa HOM05D006536 ORTHO05D005877 5.0e-08 61.6 97 38.1
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 6.5e-08 61.2 102 32.4
EL10Ac4g07942 Beta vulgaris HOM05D009374 ORTHO05D005877 6.5e-08 61.2 133 33.1
Nn1g07020 Nelumbo nucifera HOM05D023228 ORTHO05D005877 6.5e-08 61.2 142 31.7
MELO3C032238.2 Cucumis melo HOM05D006536 ORTHO05D005877 8.5e-08 60.8 97 35.1
Migut.J01038 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.1e-07 60.5 109 34.9
Eucgr.F00977 Eucalyptus grandis HOM05D006536 ORTHO05D005877 1.1e-07 60.5 142 33.8
SHI26633 Sapria himalayana HOM05D006536 ORTHO05D005877 1.1e-07 60.5 135 29.6
Nn1g07017 Nelumbo nucifera HOM05D023228 ORTHO05D005877 1.4e-07 60.1 145 31.0
Nitab4.5_0001479g0070 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.4e-07 60.1 96 36.5
PSO782G1199 Papaver somniferum HOM05D006536 ORTHO05D005877 1.4e-07 60.1 62 45.2
QL08p012979 Quercus lobata HOM05D006536 ORTHO05D005877 1.4e-07 60.1 132 32.6
ClCG10G005660 Citrullus lanatus HOM05D006536 ORTHO05D005877 2.5e-07 59.3 92 33.7
CsaV3_3G005360 Cucumis sativus L. HOM05D006536 ORTHO05D005877 3.2e-07 58.9 101 33.7
SGA_v2.0_scaffold20G09060 Striga asiatica HOM05D006536 ORTHO05D005877 3.2e-07 58.9 117 29.9
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 4.2e-07 58.5 155 31.6
MBI18_g46234_MAGBIO Magnolia biondii HOM05D009374 ORTHO05D005877 7.2e-07 57.8 112 30.4
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 9.4e-07 57.4 149 30.2
PGR083G0622 Punica granatum HOM05D006536 ORTHO05D005877 1.2e-06 57.0 62 48.4
PGR083G1686 Punica granatum HOM05D006536 ORTHO05D005877 1.2e-06 57.0 160 29.4
SalBow3G0084 Salvia bowleyana HOM05D003262 ORTHO05D003608 1.2e-06 57.0 150 28.0
SGA_v2.0_scaffold13G06718 Striga asiatica HOM05D006536 ORTHO05D005877 1.2e-06 57.0 102 33.3
HanXRQChr13g0408641 Helianthus annuus HOM05D009374 ORTHO05D005877 1.6e-06 56.6 146 30.8
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 1.6e-06 56.6 106 32.1
Cpa.g.sc97.59 Carica papaya HOM05D007475 ORTHO05D009529 2.1e-06 56.2 117 40.2
Nitab4.5_0003461g0020 Nicotiana tabacum HOM05D003749 ORTHO05D004421 2.7e-06 55.8 129 34.9
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 2.7e-06 55.8 97 27.8
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.7e-06 55.8 153 28.8
QL08p013125 Quercus lobata HOM05D009374 ORTHO05D005877 3.6e-06 55.5 99 32.3
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.6e-06 55.5 158 27.8
COL.COLO4_09580 Corchorus olitorius HOM05D015826 ORTHO05D005877 4.7e-06 55.1 139 27.3
COL.COLO4_15402 Corchorus olitorius HOM05D006536 ORTHO05D005877 4.7e-06 55.1 141 31.9
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 6.1e-06 54.7 150 26.7
TWI39G0888 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 6.1e-06 54.7 136 31.6
CAN.G257.108 Capsicum annuum HOM05D006536 ORTHO05D005877 7.9e-06 54.3 65 41.5
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 7.9e-06 54.3 158 27.2


User provided reference genes

Program Settings