Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 2.4e-190 668.7 343 100.0
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 1.7e-127 459.9 349 66.5
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 9.3e-126 454.1 344 67.4
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 1.2e-125 453.8 349 65.9
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 8.1e-122 441.0 338 66.0
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 1.4e-121 440.3 344 64.0
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.4e-121 440.3 344 65.4
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 3.4e-120 435.6 343 63.8
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 3.4e-120 435.6 343 65.9
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.9e-119 432.6 343 65.3
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 4.9e-119 431.8 302 69.2
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 6.4e-119 431.4 299 69.9
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 1.4e-118 430.3 343 63.0
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 3.2e-118 429.1 342 62.9
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 9.3e-118 427.6 348 62.4
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 1.6e-117 426.8 352 63.1
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 2.7e-117 426.0 348 62.1
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 4.6e-117 425.2 310 66.1
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 6.0e-117 424.9 344 64.0
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 7.9e-117 424.5 354 62.4
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 1.0e-116 424.1 337 62.9
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 1.0e-116 424.1 335 63.6
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 1.8e-116 423.3 345 63.8
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 5.1e-116 421.8 347 62.5
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 8.7e-116 421.0 345 64.3
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 1.1e-115 420.6 341 61.3
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 1.1e-115 420.6 340 62.4
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 1.1e-115 420.6 339 61.9
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 4.3e-115 418.7 363 60.6
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 5.6e-115 418.3 342 62.6
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 7.4e-115 417.9 342 62.6
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 1.3e-114 417.2 300 68.0
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.6e-114 416.8 340 62.4
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 1.6e-114 416.8 346 60.4
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 1.6e-114 416.8 358 60.1
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 3.7e-114 415.6 347 61.7
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 3.7e-114 415.6 336 63.1
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 6.2e-114 414.8 340 61.5
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 8.2e-114 414.5 345 60.9
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 1.4e-113 413.7 346 61.0
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 1.4e-113 413.7 343 62.1
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 1.8e-113 413.3 332 62.7
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 5.3e-113 411.8 347 60.8
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 5.3e-113 411.8 341 60.7
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 9.0e-113 411.0 347 60.8
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.5e-112 410.2 309 64.7
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 1.5e-112 410.2 358 58.9
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 1.5e-112 410.2 343 63.0
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 2.6e-112 409.5 345 60.6
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 2.6e-112 409.5 317 67.2
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 4.5e-112 408.7 300 65.3
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 4.5e-112 408.7 342 61.4
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 4.5e-112 408.7 343 60.3
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 5.8e-112 408.3 300 64.3
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 1.0e-111 407.5 347 60.2
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 1.3e-111 407.1 347 60.5
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 3.8e-111 405.6 341 61.6
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 1.1e-110 404.1 345 62.0
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 1.1e-110 404.1 300 66.7
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 3.2e-110 402.5 299 63.9
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 5.5e-110 401.7 336 60.7
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 3.5e-109 399.1 352 59.1
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 7.9e-109 397.9 349 59.3
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 1.8e-108 396.7 321 59.2
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 1.8e-108 396.7 321 59.2
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 3.0e-108 396.0 288 66.0
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 5.1e-108 395.2 349 59.9
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 6.7e-108 394.8 360 57.2
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 1.5e-107 393.7 303 63.7
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 3.3e-107 392.5 350 60.3
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 5.7e-107 391.7 349 59.0
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 5.7e-107 391.7 297 63.0
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 7.4e-107 391.3 334 61.4
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 2.2e-106 389.8 321 62.0
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 2.2e-106 389.8 295 62.4
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 2.4e-105 386.3 344 58.1
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 1.2e-104 384.0 282 67.0
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 1.2e-104 384.0 347 57.6
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 2.0e-104 383.3 348 59.2
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 1.7e-103 380.2 351 57.3
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 2.2e-103 379.8 289 63.3
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 6.5e-103 378.3 349 59.0
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 6.5e-103 378.3 349 59.0
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 2.3e-100 369.8 319 60.5
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.9e-100 369.0 306 63.7
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 2.0e-99 366.7 342 57.3
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 9.7e-99 364.4 352 55.4
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 3.7e-98 362.5 304 56.2
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 1.4e-97 360.5 339 56.6
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 3.1e-97 359.4 216 78.2
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 2.6e-96 356.3 316 58.9
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 1.1e-94 350.9 268 63.4
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 2.5e-94 349.7 310 57.1
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 1.4e-92 344.0 232 67.7
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 3.0e-92 342.8 271 61.3
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 2.0e-91 340.1 240 67.9
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 2.0e-88 330.1 281 60.9
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 1.0e-87 327.8 355 51.3
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 8.8e-84 314.7 300 51.3
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 1.4e-76 290.8 250 60.0
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 1.7e-74 283.9 351 47.9
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 4.0e-68 262.7 235 50.6
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.4e-65 254.2 282 46.5
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 1.6e-64 250.8 301 44.5
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 2.3e-63 246.9 208 58.2
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.9e-63 246.5 228 58.8
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.1e-62 244.6 283 44.9
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 1.5e-59 234.2 228 56.1
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 2.7e-56 223.4 182 60.4
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 4.5e-56 222.6 239 46.0
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 2.8e-53 213.4 304 40.8
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 1.2e-48 198.0 163 58.3
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.5e-46 191.0 253 41.1
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 5.2e-44 182.6 312 37.5
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 2.9e-34 150.2 114 59.6
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 7.8e-32 142.1 184 47.3
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 6.8e-28 129.0 153 49.0
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 6.0e-16 89.4 151 40.4
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 4.9e-10 69.7 162 35.8
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 5.4e-09 66.2 102 39.2
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 1.2e-08 65.1 41 68.3
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 3.9e-07 60.1 34 70.6


User provided reference genes

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