Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 8.3e-88 327.0 167 100.0
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 3.3e-52 208.8 160 66.2
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 2.0e-49 199.5 160 61.2
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 2.6e-49 199.1 164 60.4
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 5.8e-49 198.0 163 62.0
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 7.6e-49 197.6 155 61.3
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 7.6e-49 197.6 157 61.1
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 4.9e-48 194.9 157 60.5
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 6.5e-48 194.5 157 59.9
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 1.1e-47 193.7 157 58.0
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.9e-47 193.0 157 58.0
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 1.9e-47 193.0 161 57.8
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 3.2e-47 192.2 166 57.2
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 4.2e-47 191.8 165 56.4
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 1.2e-46 190.3 147 60.5
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.2e-46 190.3 157 60.5
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 2.1e-46 189.5 159 57.9
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 3.5e-46 188.7 161 55.9
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 6.0e-46 188.0 157 58.0
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 6.0e-46 188.0 158 58.2
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 7.9e-46 187.6 161 57.8
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 5.1e-45 184.9 160 57.5
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 6.7e-45 184.5 146 60.3
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 1.1e-44 183.7 161 56.5
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 1.5e-44 183.3 158 57.0
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 1.9e-44 183.0 159 57.2
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 1.9e-44 183.0 165 54.5
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 2.5e-44 182.6 157 56.1
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 3.3e-44 182.2 161 55.3
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 4.3e-44 181.8 153 54.9
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 4.3e-44 181.8 161 57.1
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 4.3e-44 181.8 164 54.9
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 5.7e-44 181.4 140 60.7
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 7.4e-44 181.0 144 62.5
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 7.4e-44 181.0 142 57.7
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 7.4e-44 181.0 158 56.3
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 1.6e-43 179.9 163 53.4
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 2.8e-43 179.1 153 58.8
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 3.7e-43 178.7 157 57.3
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 6.3e-43 177.9 156 57.7
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 6.3e-43 177.9 159 56.0
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 8.2e-43 177.6 144 61.1
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 8.2e-43 177.6 137 59.1
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 1.1e-42 177.2 154 59.1
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 1.1e-42 177.2 162 53.1
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 1.1e-42 177.2 153 54.2
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 2.4e-42 176.0 141 58.2
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 2.4e-42 176.0 137 60.6
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 3.1e-42 175.6 151 57.0
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 4.1e-42 175.3 140 56.4
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 5.3e-42 174.9 142 61.3
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 6.9e-42 174.5 154 59.1
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 1.2e-41 173.7 154 54.5
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 1.5e-41 173.3 159 54.7
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 2.0e-41 172.9 169 51.5
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 2.0e-41 172.9 165 53.9
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 2.6e-41 172.6 150 55.3
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 2.6e-41 172.6 155 54.8
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 3.4e-41 172.2 156 54.5
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 3.4e-41 172.2 167 52.1
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 4.5e-41 171.8 157 54.8
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 5.9e-41 171.4 166 52.4
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 1.0e-40 170.6 156 53.8
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 1.3e-40 170.2 168 51.8
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 1.7e-40 169.9 156 54.5
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 1.7e-40 169.9 164 51.2
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 2.2e-40 169.5 156 55.1
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 2.2e-40 169.5 157 54.1
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 2.2e-40 169.5 157 54.1
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 3.8e-40 168.7 169 52.7
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 3.8e-40 168.7 165 52.1
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 5.0e-40 168.3 156 54.5
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 5.0e-40 168.3 158 55.1
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 6.5e-40 167.9 168 52.4
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 1.9e-39 166.4 140 55.7
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 2.5e-39 166.0 150 52.7
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 5.5e-39 164.9 162 50.6
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 7.2e-39 164.5 137 56.9
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 9.3e-39 164.1 152 52.6
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 1.6e-38 163.3 140 58.6
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.6e-38 163.3 161 47.8
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 2.1e-38 162.9 147 51.7
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 2.1e-38 162.9 165 52.7
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 2.7e-38 162.5 158 51.9
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 4.6e-38 161.8 150 52.7
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 4.6e-38 161.8 137 52.6
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 6.1e-38 161.4 167 48.5
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 7.9e-38 161.0 140 50.7
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.4e-37 160.2 144 54.9
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 1.4e-37 160.2 145 51.7
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 5.1e-37 158.3 158 50.0
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 1.1e-36 157.1 143 52.4
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 1.9e-36 156.4 146 53.4
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 2.2e-35 152.9 133 51.9
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 2.2e-35 152.9 148 50.0
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 8.2e-35 151.0 114 64.0
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 1.1e-34 150.6 114 63.2
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 1.1e-34 150.6 135 52.6
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 1.1e-34 150.6 147 47.6
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 1.4e-34 150.2 144 47.9
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 3.1e-34 149.1 128 56.2
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 9.1e-34 147.5 115 61.7
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 1.0e-32 144.1 165 46.1
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 2.2e-32 142.9 110 60.0
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 1.2e-30 137.1 135 48.9
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 7.9e-30 134.4 122 54.9
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 1.0e-29 134.0 137 44.5
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.8e-29 133.3 150 44.7
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 3.0e-29 132.5 155 49.0
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 7.4e-28 127.9 159 44.0
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 2.4e-26 122.9 128 47.7
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 2.2e-24 116.3 159 37.1
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 2.5e-23 112.8 139 36.7
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 3.2e-23 112.5 137 34.3
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 1.4e-21 107.1 132 42.4
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 2.3e-21 106.3 154 37.7
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 1.1e-20 104.0 153 41.2
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 7.4e-20 101.3 76 60.5
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 3.7e-19 99.0 90 54.4
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 6.3e-19 98.2 107 45.8
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 9.1e-18 94.4 89 53.9
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 4.5e-17 92.0 89 52.8
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 3.8e-16 89.0 125 40.0
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 2.1e-14 83.2 151 35.8
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 6.1e-14 81.6 80 53.8
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 3.3e-12 75.9 64 56.2
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 6.3e-11 71.6 138 31.2
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 4.1e-10 68.9 78 42.3
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 9.1e-10 67.8 76 42.1
Actinidia20438 Actinidia chinensis HOM05D002419 ORTHO05D008128 5.0e-08 62.0 55 49.1
Ciclev10029934m.g Citrus clementina HOM05D002419 ORTHO05D008128 8.0e-06 54.7 41 51.2


User provided reference genes

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