Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 2.0e-217 758.8 386 100.0
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 3.9e-157 558.5 395 74.4
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 1.7e-155 553.1 402 73.1
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 3.1e-154 548.9 397 71.5
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 8.5e-152 540.8 395 72.2
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 1.0e-149 533.9 392 70.2
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 3.0e-149 532.3 331 77.9
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 6.7e-149 531.2 404 69.8
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 1.1e-148 530.4 372 71.0
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 1.5e-148 530.0 326 76.7
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 9.7e-148 527.3 405 67.7
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 2.8e-147 525.8 362 72.7
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 3.7e-147 525.4 389 70.7
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 6.3e-147 524.6 326 76.1
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.4e-146 523.5 326 75.8
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 4.1e-146 521.9 390 69.2
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 1.2e-145 520.4 391 67.5
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 1.0e-144 517.3 332 75.3
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 8.5e-144 514.2 325 76.6
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 3.2e-143 512.3 400 69.2
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 4.2e-143 511.9 393 70.5
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 5.5e-143 511.5 397 67.5
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 1.6e-142 510.0 392 69.1
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.4e-141 506.9 333 73.0
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.4e-141 506.9 333 73.0
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 5.2e-141 505.0 391 68.0
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 5.2e-141 505.0 323 75.9
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 8.8e-141 504.2 392 68.1
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 8.8e-141 504.2 401 66.8
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 1.5e-140 503.4 398 68.1
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 2.6e-140 502.7 312 78.5
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 3.3e-140 502.3 336 72.6
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 7.5e-140 501.1 331 70.7
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 7.5e-140 501.1 392 65.6
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 2.8e-139 499.2 392 65.1
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 3.7e-139 498.8 332 72.0
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 1.1e-138 497.3 334 72.2
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 1.8e-138 496.5 325 73.8
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 2.4e-138 496.1 310 78.1
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 9.1e-138 494.2 399 65.2
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 2.7e-137 492.7 398 66.8
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 2.9e-136 489.2 333 70.9
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 2.9e-136 489.2 325 70.2
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 3.8e-136 488.8 328 69.8
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 3.8e-136 488.8 319 72.4
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 1.1e-135 487.3 384 65.1
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 2.5e-135 486.1 393 65.9
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 2.5e-135 486.1 398 63.1
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 4.2e-135 485.3 400 65.8
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 4.2e-135 485.3 399 62.9
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 7.2e-135 484.6 388 66.8
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 2.7e-134 482.6 385 66.0
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 2.7e-134 482.6 385 64.2
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 6.1e-134 481.5 385 66.2
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 1.8e-133 479.9 388 62.1
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 1.8e-133 479.9 394 64.2
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 2.3e-133 479.6 388 64.4
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 3.0e-133 479.2 398 63.3
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 3.0e-133 479.2 394 63.2
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 5.2e-133 478.4 388 62.1
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 5.2e-133 478.4 386 63.7
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 5.2e-133 478.4 386 62.2
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 2.0e-132 476.5 394 62.4
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 2.6e-132 476.1 388 64.7
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 3.4e-132 475.7 395 60.3
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 4.4e-132 475.3 390 65.6
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 4.4e-132 475.3 402 61.2
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 5.7e-132 474.9 381 66.1
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 7.5e-132 474.6 388 61.9
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 7.5e-132 474.6 396 60.6
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 2.2e-131 473.0 392 61.2
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 2.2e-131 473.0 389 64.0
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 6.3e-131 471.5 387 63.8
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 8.3e-131 471.1 321 67.6
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 1.1e-130 470.7 393 65.6
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 1.4e-130 470.3 386 62.4
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 2.4e-130 469.5 394 59.9
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 5.9e-129 464.9 441 55.3
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 1.0e-128 464.2 396 61.6
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.0e-128 464.2 417 58.0
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 2.3e-128 463.0 328 67.1
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 6.5e-128 461.5 397 61.7
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 8.6e-128 461.1 386 61.4
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 8.6e-128 461.1 397 61.0
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 5.5e-127 458.4 389 61.2
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 1.6e-126 456.8 321 67.6
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 2.8e-126 456.1 322 68.0
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.0e-125 454.1 402 58.0
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 6.8e-125 451.4 392 60.5
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 7.5e-124 448.0 320 64.7
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 3.1e-122 442.6 318 67.3
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 1.2e-121 440.7 327 65.4
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 2.0e-121 439.9 388 58.2
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 6.6e-120 434.9 278 74.8
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 4.7e-118 428.7 404 54.5
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 5.2e-117 425.2 312 63.8
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 1.1e-111 407.5 292 63.7
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 4.6e-105 385.6 329 62.9
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 1.7e-104 383.6 306 61.1
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.5e-103 380.6 249 75.5
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 1.9e-103 380.2 403 49.1
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 3.7e-99 365.9 323 56.7
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 1.2e-97 360.9 334 56.6
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 2.4e-90 336.7 323 52.3
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 2.3e-88 330.1 310 53.2
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 3.0e-88 329.7 310 53.5
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 8.4e-83 311.6 219 69.9
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.5e-39 167.9 99 73.7
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 6.5e-35 152.5 94 74.5
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 8.0e-33 145.6 395 30.9
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 2.9e-27 127.1 128 54.7
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 3.7e-22 110.2 77 62.3
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 1.4e-21 108.2 65 69.2
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 1.7e-19 101.3 54 85.2
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 6.8e-16 89.4 124 46.0
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 1.3e-14 85.1 59 66.1
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 1.6e-12 78.2 53 69.8
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 1.1e-10 72.0 128 35.9


User provided reference genes

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