Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0965 Cannabis sativa HOM05D006241 ORTHO05D007842 3.5e-37 157.5 67 100.0
Prupe.1G355800 Prunus persica HOM05D006241 ORTHO05D007842 3.8e-31 137.5 68 85.3
CiPaw.07G140100 Carya illinoinensis HOM05D006241 ORTHO05D007842 1.1e-30 136.0 72 79.2
FvH4_2g37630 Fragaria vesca HOM05D006241 ORTHO05D007842 1.9e-30 135.2 69 79.7
Actinidia15484 Actinidia chinensis HOM05D006241 ORTHO05D007842 2.4e-30 134.8 64 87.5
FAN15G0812 Fragaria x ananassa HOM05D006241 ORTHO05D007842 2.4e-30 134.8 69 79.7
THA.LOC104811457 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 3.2e-30 134.4 67 82.1
Actinidia17033 Actinidia chinensis HOM05D006241 ORTHO05D007842 7.1e-30 133.3 64 84.4
MELO3C017010.2 Cucumis melo HOM05D006241 ORTHO05D007842 7.1e-30 133.3 66 81.8
THA.LOC109116669 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 7.1e-30 133.3 67 80.6
CAN.G311.105 Capsicum annuum HOM05D006241 ORTHO05D007842 9.3e-30 132.9 64 79.7
Cfa014051 Carpinus fangiana HOM05D006241 ORTHO05D007842 9.3e-30 132.9 66 83.3
Gohir.A01G107600 Gossypium hirsutum HOM05D006241 ORTHO05D007842 9.3e-30 132.9 71 81.7
Potri.005G248600 Populus trichocarpa HOM05D006241 ORTHO05D007842 9.3e-30 132.9 65 84.6
CiPaw.08G071900 Carya illinoinensis HOM05D006241 ORTHO05D007842 1.2e-29 132.5 69 79.7
TWI12G0416 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 2.7e-29 131.3 62 83.9
Lj3g0010530 Lotus japonicus HOM05D006241 ORTHO05D007842 3.5e-29 131.0 67 80.6
TWI56G0163 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 4.6e-29 130.6 62 82.3
CsaV3_4G037120 Cucumis sativus L. HOM05D006241 ORTHO05D007842 6.0e-29 130.2 68 79.4
Gohir.D01G094000 Gossypium hirsutum HOM05D006241 ORTHO05D007842 6.0e-29 130.2 71 80.3
Gorai.002G119300 Gossypium raimondii HOM05D006241 ORTHO05D007842 6.0e-29 130.2 71 80.3
PGSC0003DMG400009898 Solanum tuberosum HOM05D006241 ORTHO05D007842 7.8e-29 129.8 64 78.1
Cc10_g00830 Coffea canephora HOM05D006241 ORTHO05D007842 1.3e-28 129.0 64 81.2
Duzib116G0823 Durio zibethinus HOM05D006241 ORTHO05D007842 1.3e-28 129.0 71 78.9
Glyma.11G099500 Glycine max HOM05D006241 ORTHO05D007842 1.3e-28 129.0 66 80.3
arahy.Tifrunner.gnm1.ann1.1F1YZI Arachis hypogaea HOM05D006241 ORTHO05D007842 1.7e-28 128.6 64 81.2
arahy.Tifrunner.gnm1.ann1.1NSU2H Arachis hypogaea HOM05D006241 ORTHO05D007842 1.7e-28 128.6 64 81.2
arahy.Tifrunner.gnm1.ann1.4R2MNP Arachis hypogaea HOM05D006241 ORTHO05D007842 1.7e-28 128.6 64 81.2
arahy.Tifrunner.gnm1.ann1.L8CN1K Arachis hypogaea HOM05D006241 ORTHO05D007842 1.7e-28 128.6 64 81.2
PGR031G1817 Punica granatum HOM05D006241 ORTHO05D007842 1.7e-28 128.6 68 80.9
Aa31LG4G6300 Aethionema arabicum HOM05D006241 ORTHO05D007842 2.3e-28 128.3 67 77.6
QL02p013848 Quercus lobata HOM05D006241 ORTHO05D007842 2.3e-28 128.3 68 80.9
Cpa.g.sc222.6 Carica papaya HOM05D006241 ORTHO05D007842 3.0e-28 127.9 70 80.0
CSS0008517 Camellia sinensis var. sinensis HOM05D006241 ORTHO05D007842 3.9e-28 127.5 71 77.5
Gohir.A05G180800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 3.9e-28 127.5 71 77.5
Gorai.009G189100 Gossypium raimondii HOM05D006241 ORTHO05D007842 3.9e-28 127.5 71 78.9
Manes.18G006720 Manihot esculenta HOM05D006241 ORTHO05D007842 3.9e-28 127.5 66 78.8
Potri.002G012700 Populus trichocarpa HOM05D006241 ORTHO05D007842 3.9e-28 127.5 64 82.8
Sabra05G0192000 Salix brachista HOM05D006241 ORTHO05D007842 3.9e-28 127.5 65 80.0
Atru.chr13.161 Acer truncatum HOM05D006241 ORTHO05D007842 6.6e-28 126.7 68 77.9
CARHR069760 Cardamine hirsuta HOM05D006241 ORTHO05D007842 6.6e-28 126.7 67 73.1
Duzib093G0667 Durio zibethinus HOM05D006241 ORTHO05D007842 6.6e-28 126.7 71 77.5
Manes.05G136000 Manihot esculenta HOM05D006241 ORTHO05D007842 6.6e-28 126.7 66 78.8
Nn5g30908 Nelumbo nucifera HOM05D006241 ORTHO05D007842 6.6e-28 126.7 68 79.4
AL2G36270 Arabidopsis lyrata HOM05D006241 ORTHO05D007842 8.7e-28 126.3 66 74.2
AT1G76200 Arabidopsis thaliana HOM05D006241 ORTHO05D007842 8.7e-28 126.3 66 74.2
Glyma.12G025500 Glycine max HOM05D006241 ORTHO05D007842 8.7e-28 126.3 66 78.8
SGA_v2.0_scaffold25G11191 Striga asiatica HOM05D006241 ORTHO05D007842 8.7e-28 126.3 63 79.4
COL.COLO4_21601 Corchorus olitorius HOM05D006241 ORTHO05D007842 1.1e-27 125.9 68 79.4
Duzib041G0756 Durio zibethinus HOM05D006241 ORTHO05D007842 1.1e-27 125.9 65 80.0
Gohir.D05G183800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 1.5e-27 125.6 71 77.5
Thecc.08G056300 Theobroma cacao HOM05D006241 ORTHO05D007842 3.3e-27 124.4 71 76.1
Lsat_1_v5_gn_8_133721 Lactuca sativa HOM05D006241 ORTHO05D007842 4.3e-27 124.0 67 79.1
Aqoxy6G01804 Aquilegia oxysepala HOM05D006241 ORTHO05D007842 9.6e-27 122.9 58 82.8
Migut.N03197 Erythranthe guttata HOM05D006241 ORTHO05D007842 9.6e-27 122.9 63 76.2
TAR376G1175 Trochodendron aralioides HOM05D006241 ORTHO05D007842 9.6e-27 122.9 57 87.7
PSO357G0248 Papaver somniferum HOM05D006241 ORTHO05D007842 1.6e-26 122.1 58 81.0
Phvul.011G027800 Phaseolus vulgaris HOM05D006241 ORTHO05D007842 1.6e-26 122.1 64 76.6
Ca_19011_v3 Cicer arietinum L. HOM05D006241 ORTHO05D007842 2.1e-26 121.7 65 76.9
Ciclev10010113m.g Citrus clementina HOM05D006241 ORTHO05D007842 2.8e-26 121.3 66 74.2
Eucgr.F01733 Eucalyptus grandis HOM05D006241 ORTHO05D007842 2.8e-26 121.3 58 81.0
PSO170G5266 Papaver somniferum HOM05D006241 ORTHO05D007842 2.8e-26 121.3 58 81.0
Dinv39579 Davidia involucrata HOM05D006241 ORTHO05D007842 3.6e-26 120.9 62 80.6
Psat7g177480 Pisum sativum HOM05D006241 ORTHO05D007842 4.8e-26 120.6 67 76.1
Thhalv10019410m.g Eutrema salsugineum HOM05D006241 ORTHO05D007842 8.1e-26 119.8 67 73.1
TAR381G1678 Trochodendron aralioides HOM05D006241 ORTHO05D007842 8.1e-26 119.8 62 80.6
Dinv31923 Davidia involucrata HOM05D006241 ORTHO05D007842 1.4e-25 119.0 57 82.5
BcaB02g07055 Brassica carinata HOM05D006241 ORTHO05D007842 2.4e-25 118.2 67 70.1
Carub.0002s2310 Capsella rubella HOM05D006241 ORTHO05D007842 2.4e-25 118.2 67 71.6
Sp5g31350 Schrenkiella parvula HOM05D006241 ORTHO05D007842 2.4e-25 118.2 67 71.6
CDE05G0950 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 4.0e-25 117.5 65 72.3
CDE05G1511 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 4.0e-25 117.5 65 72.3
Lalb_Chr17g0337811 Lupinus albus HOM05D006241 ORTHO05D007842 5.3e-25 117.1 68 72.1
A07p28590 Brassica napus HOM05D006241 ORTHO05D007842 1.2e-24 115.9 67 70.1
ECA248G1104 Erigeron canadensis HOM05D006241 ORTHO05D007842 1.5e-24 115.5 71 73.2
BcaC08g47115 Brassica carinata HOM05D006241 ORTHO05D007842 2.6e-24 114.8 67 68.7
Lalb_Chr10g0094931 Lupinus albus HOM05D006241 ORTHO05D007842 5.8e-24 113.6 70 68.6
BcaC08g47119 Brassica carinata HOM05D006241 ORTHO05D007842 9.9e-24 112.8 67 67.2
BcaC08g47281 Brassica carinata HOM05D006241 ORTHO05D007842 9.9e-24 112.8 67 67.2
A07p41770 Brassica napus HOM05D006241 ORTHO05D007842 9.9e-24 112.8 67 67.2
C06p50150 Brassica napus HOM05D006241 ORTHO05D007842 9.9e-24 112.8 67 67.2
BolC6t40055H Brassica oleracea HOM05D006241 ORTHO05D007842 9.9e-24 112.8 67 67.2
BraA07t30500Z Brassica rapa HOM05D006241 ORTHO05D007842 1.3e-23 112.5 67 68.7
BraA07t31707Z Brassica rapa HOM05D006241 ORTHO05D007842 1.3e-23 112.5 64 67.2
ATR0661G361 Amborella trichopoda HOM05D006241 ORTHO05D007842 2.9e-23 111.3 68 69.1
BcaC08g45539 Brassica carinata HOM05D006241 ORTHO05D007842 4.9e-23 110.5 65 66.2
C06p32170 Brassica napus HOM05D006241 ORTHO05D007842 4.9e-23 110.5 65 66.2
BolC6t38340H Brassica oleracea HOM05D006241 ORTHO05D007842 4.9e-23 110.5 65 66.2
BcaB05g24973 Brassica carinata HOM05D006241 ORTHO05D007842 1.9e-22 108.6 60 66.7
BraA02t07081Z Brassica rapa HOM05D006241 ORTHO05D007842 2.4e-22 108.2 63 68.3
Pp3c21_21340 Physcomitrium patens HOM05D006241 ORTHO05D007842 7.1e-22 106.7 67 68.7
AagrBONN_evm.TU.Sc2ySwM_117.850 Anthoceros agrestis HOM05D006241 ORTHO05D007842 9.3e-22 106.3 62 67.7
Pp3c18_1920 Physcomitrium patens HOM05D006241 ORTHO05D007842 2.1e-21 105.1 67 67.2
GSVIVG01008691001 Vitis vinifera HOM05D006241 ORTHO05D007842 2.1e-21 105.1 52 80.8
Os05g0122900 Oryza sativa ssp. japonica HOM05D006241 ORTHO05D007842 2.7e-21 104.8 65 67.7
MD08G1003800 Malus domestica HOM05D006241 ORTHO05D007842 4.6e-21 104.0 51 82.4
MD15G1003400 Malus domestica HOM05D006241 ORTHO05D007842 1.8e-20 102.1 50 82.0
FAN20G1861 Fragaria x ananassa HOM05D006241 ORTHO05D007842 3.0e-20 101.3 50 80.0
VMungo1127G1075 Vigna mungo HOM05D006241 ORTHO05D007842 3.0e-20 101.3 52 80.8
Nitab4.5_0000588g0230 Nicotiana tabacum HOM05D006241 ORTHO05D007842 5.1e-20 100.5 51 78.4
RcHm_v2.0_Chr6g0304101 Rosa chinensis HOM05D006241 ORTHO05D007842 5.1e-20 100.5 50 80.0
Hund08526 Selenicereus undatus HOM05D006241 ORTHO05D007842 4.3e-19 97.4 53 81.1
Zm00001eb294120 Zea mays HOM05D006241 ORTHO05D007842 9.6e-19 96.3 65 64.6
Zm00001eb356460 Zea mays HOM05D006241 ORTHO05D007842 9.6e-19 96.3 65 64.6
Mapoly0108s0047 Marchantia polymorpha HOM05D006241 ORTHO05D007842 1.3e-18 95.9 62 61.3
HanXRQChr17g0555751 Helianthus annuus HOM05D006241 ORTHO05D007842 8.1e-18 93.2 51 76.5
Mapoly0103s0030 Marchantia polymorpha HOM05D006241 ORTHO05D007842 8.1e-18 93.2 60 58.3
HPP92_021050 Vanilla planifolia HOM05D006241 ORTHO05D007842 8.1e-18 93.2 53 75.5
HanXRQChr17g0554651 Helianthus annuus HOM05D006241 ORTHO05D007842 1.1e-17 92.8 65 66.2
MBI19_g43741_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 9.0e-17 89.7 48 75.0
Os06g0725400 Oryza sativa ssp. japonica HOM05D006241 ORTHO05D007842 3.4e-16 87.8 66 62.1
BolC2t09367H Brassica oleracea HOM05D006241 ORTHO05D007842 1.9e-14 82.0 50 66.0
SalBow6G4847 Salvia bowleyana HOM05D006241 ORTHO05D007842 1.8e-12 75.5 52 65.4
Sabra07G0051400 Salix brachista HOM05D006241 ORTHO05D349851 4.3e-11 70.9 51 62.7
AUR62015196 Chenopodium quinoa HOM05D006241 ORTHO05D007842 2.1e-10 68.6 36 77.8
AUR62017658 Chenopodium quinoa HOM05D006241 ORTHO05D007842 2.1e-10 68.6 36 77.8
Ah.01g013010 Amaranthus hybridus HOM05D006241 ORTHO05D007842 4.8e-10 67.4 36 75.0
DCAR_013903 Daucus carota HOM05D006241 ORTHO05D007842 8.2e-10 66.6 51 60.8
Nn6g31777 Nelumbo nucifera HOM05D006241 ORTHO05D007842 1.1e-09 66.2 41 68.3
ClCG05G015200 Citrullus lanatus HOM05D006241 ORTHO05D007842 1.4e-09 65.9 34 70.6
Ah.01g001690 Amaranthus hybridus HOM05D006241 ORTHO05D007842 1.8e-09 65.5 36 72.2
Sed0002381 Sechium edule HOM05D006241 ORTHO05D007842 6.9e-09 63.5 34 67.6
vmacro04395 Vaccinium macrocarpon HOM05D006241 ORTHO05D007842 1.2e-08 62.8 31 80.6
unitig_746.g26818 Utricularia gibba HOM05D003604 ORTHO05D000209 2.0e-08 62.0 32 68.8
Medtr4g075160 Medicago truncatula HOM05D006241 ORTHO05D007842 2.6e-08 61.6 38 65.8
MBI19_g35281_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 1.3e-07 59.3 33 66.7
DCAR_016755 Daucus carota HOM05D006241 ORTHO05D007842 1.7e-07 58.9 32 71.9


User provided reference genes

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