Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0919 Cannabis sativa HOM05D005110 ORTHO05D006074 3.3e-95 351.7 174 100.0
Dinv22825 Davidia involucrata HOM05D005110 ORTHO05D006074 4.4e-55 218.4 177 63.8
GSVIVG01036094001 Vitis vinifera HOM05D005110 ORTHO05D006074 2.8e-54 215.7 176 64.2
QL01p011992 Quercus lobata HOM05D005110 ORTHO05D006074 1.4e-53 213.4 178 64.0
Duzib150G1383 Durio zibethinus HOM05D005110 ORTHO05D006074 2.4e-53 212.6 176 61.9
MD03G1148100 Malus domestica HOM05D005110 ORTHO05D006074 2.6e-52 209.1 177 59.9
Duzib168G1438 Durio zibethinus HOM05D005110 ORTHO05D006074 5.9e-52 208.0 170 62.9
Duzib170G1118 Durio zibethinus HOM05D005110 ORTHO05D006074 1.3e-51 206.8 177 60.5
Prupe.6G134300 Prunus persica HOM05D005110 ORTHO05D006074 1.3e-51 206.8 169 61.5
Dinv42535 Davidia involucrata HOM05D005110 ORTHO05D006074 1.1e-50 203.8 177 58.8
Hma1.2p1_0587F.1_g184070 Hydrangea macrophylla HOM05D005110 ORTHO05D006074 1.1e-50 203.8 181 60.8
QL01p011978 Quercus lobata HOM05D005110 ORTHO05D006074 1.9e-50 203.0 179 63.1
Lj3g0002892 Lotus japonicus HOM05D005110 ORTHO05D006074 3.2e-50 202.2 169 60.9
MD11G1167600 Malus domestica HOM05D005110 ORTHO05D006074 4.2e-50 201.8 177 58.2
Glyma.12G091100 Glycine max HOM05D005110 ORTHO05D006074 5.5e-50 201.4 176 59.7
Phvul.011G095400 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 8.0e-49 197.6 176 59.1
COL.COLO4_34021 Corchorus olitorius HOM05D005110 ORTHO05D006074 1.0e-48 197.2 176 58.0
FvH4_3g25370 Fragaria vesca HOM05D005110 ORTHO05D006074 1.0e-48 197.2 171 59.1
FAN11G1413 Fragaria x ananassa HOM05D005110 ORTHO05D006074 1.0e-48 197.2 171 59.1
FAN21G3897 Fragaria x ananassa HOM05D005110 ORTHO05D006074 1.0e-48 197.2 171 59.1
Thecc.09G280200 Theobroma cacao HOM05D005110 ORTHO05D006074 1.0e-48 197.2 176 56.2
CiPaw.13G134200 Carya illinoinensis HOM05D005110 ORTHO05D006074 2.3e-48 196.1 176 59.1
FAN25G3715 Fragaria x ananassa HOM05D005110 ORTHO05D006074 3.0e-48 195.7 171 59.1
Gohir.A05G079700 Gossypium hirsutum HOM05D005110 ORTHO05D006074 3.0e-48 195.7 181 59.7
CiPaw.14G098700 Carya illinoinensis HOM05D005110 ORTHO05D006074 6.7e-48 194.5 177 57.6
Glyma.11G182100 Glycine max HOM05D005110 ORTHO05D006074 6.7e-48 194.5 177 59.3
Oeu035569.1 Olea europaea HOM05D005110 ORTHO05D006074 1.1e-47 193.7 169 58.6
Actinidia37076 Actinidia chinensis HOM05D005110 ORTHO05D006074 1.5e-47 193.4 178 57.9
Gohir.D05G082600 Gossypium hirsutum HOM05D005110 ORTHO05D006074 1.5e-47 193.4 180 57.8
Gorai.009G084200 Gossypium raimondii HOM05D005110 ORTHO05D006074 1.5e-47 193.4 180 57.8
CSS0022586 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 2.0e-47 193.0 178 57.9
Ciclev10029378m.g Citrus clementina HOM05D005110 ORTHO05D006074 2.6e-47 192.6 179 58.1
Cfa009996 Carpinus fangiana HOM05D005110 ORTHO05D006074 4.4e-47 191.8 181 60.2
Lalb_Chr03g0028181 Lupinus albus HOM05D005110 ORTHO05D006074 7.4e-47 191.0 176 58.0
Rhsim01G0204600 Rhododendron simsii HOM05D005110 ORTHO05D006074 1.3e-46 190.3 175 58.3
TWI79G0870 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 1.3e-46 190.3 173 58.4
TPR.G17227 Trifolium pratense HOM05D005110 ORTHO05D006074 1.7e-46 189.9 176 56.2
Potri.009G019300 Populus trichocarpa HOM05D005110 ORTHO05D006074 2.2e-46 189.5 168 59.5
Glyma.13G315400 Glycine max HOM05D005110 ORTHO05D006074 3.7e-46 188.7 177 55.9
VMungo1127G0906 Vigna mungo HOM05D005110 ORTHO05D006074 3.7e-46 188.7 170 59.4
TWI31G0848 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 8.2e-46 187.6 170 59.4
Nn2g14215 Nelumbo nucifera HOM05D005110 ORTHO05D006074 1.4e-45 186.8 182 54.4
Atru.chr3.3190 Acer truncatum HOM05D005110 ORTHO05D006074 9.1e-45 184.1 181 55.2
Medtr2g086680 Medicago truncatula HOM05D005110 ORTHO05D006074 3.5e-44 182.2 176 55.1
Cpa.g.sc195.13 Carica papaya HOM05D005110 ORTHO05D006074 1.3e-43 180.3 168 59.5
Lalb_Chr01g0004911 Lupinus albus HOM05D005110 ORTHO05D006074 2.2e-43 179.5 176 54.5
Sabra09G0012800 Salix brachista HOM05D005110 ORTHO05D006074 2.9e-43 179.1 174 55.7
Actinidia25117 Actinidia chinensis HOM05D005110 ORTHO05D006074 6.5e-43 177.9 173 55.5
Psat7g142160 Pisum sativum HOM05D005110 ORTHO05D006074 8.5e-43 177.6 176 54.0
SGA_v2.0_scaffold22G09852 Striga asiatica HOM05D005110 ORTHO05D006074 1.1e-42 177.2 176 53.4
PGR102G3267 Punica granatum HOM05D005110 ORTHO05D006074 1.5e-42 176.8 180 53.9
Cc01_g08910 Coffea canephora HOM05D005110 ORTHO05D006074 1.9e-42 176.4 176 51.7
Phvul.005G122600 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 1.9e-42 176.4 179 52.5
ECA248G3565 Erigeron canadensis HOM05D005110 ORTHO05D006074 4.2e-42 175.3 174 51.7
PGSC0003DMG400005884 Solanum tuberosum HOM05D005110 ORTHO05D006074 4.2e-42 175.3 168 53.6
Solyc06g074260.4 Solanum lycopersicum HOM05D005110 ORTHO05D006074 5.5e-42 174.9 168 53.0
VMungo1080G1295 Vigna mungo HOM05D005110 ORTHO05D006074 7.2e-42 174.5 177 53.1
vmacro14345 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 9.4e-42 174.1 183 53.6
DCAR_010338 Daucus carota HOM05D005110 ORTHO05D006074 2.1e-41 172.9 179 51.4
Rhsim13G0112900 Rhododendron simsii HOM05D005110 ORTHO05D006074 2.7e-41 172.6 176 53.4
Eucgr.B03836 Eucalyptus grandis HOM05D005110 ORTHO05D006074 4.7e-41 171.8 184 52.2
Oeu027156.1 Olea europaea HOM05D005110 ORTHO05D006074 4.7e-41 171.8 179 52.5
vmacro03324 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 4.7e-41 171.8 176 54.0
Sopen06g030680 Solanum pennellii HOM05D005110 ORTHO05D006074 6.1e-41 171.4 168 51.8
MBI17_g32417_MAGBIO Magnolia biondii HOM05D005110 ORTHO05D006074 1.4e-40 170.2 178 49.4
Manes.11G163300 Manihot esculenta HOM05D005110 ORTHO05D006074 1.4e-40 170.2 178 52.8
arahy.Tifrunner.gnm1.ann1.EYNG7S Arachis hypogaea HOM05D005110 ORTHO05D006074 1.8e-40 169.9 178 56.2
HanXRQChr01g0024471 Helianthus annuus HOM05D005110 ORTHO05D006074 1.8e-40 169.9 173 52.0
HanXRQChr13g0426031 Helianthus annuus HOM05D005110 ORTHO05D006074 1.8e-40 169.9 174 52.3
Lalb_Chr19g0136401 Lupinus albus HOM05D005110 ORTHO05D006074 2.3e-40 169.5 172 53.5
Psat5g259000 Pisum sativum HOM05D005110 ORTHO05D006074 2.3e-40 169.5 173 51.4
Aqoxy4G02728 Aquilegia oxysepala HOM05D005110 ORTHO05D006074 3.0e-40 169.1 182 51.6
CAN.G919.35 Capsicum annuum HOM05D005110 ORTHO05D006074 4.0e-40 168.7 170 53.5
SalBow6G3038 Salvia bowleyana HOM05D005110 ORTHO05D006074 4.0e-40 168.7 174 51.7
Lsat_1_v5_gn_1_59041 Lactuca sativa HOM05D005110 ORTHO05D006074 5.2e-40 168.3 177 51.4
Oeu002365.1 Olea europaea HOM05D005110 ORTHO05D006074 8.8e-40 167.5 179 52.0
CSS0002660 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 2.0e-39 166.4 180 51.7
arahy.Tifrunner.gnm1.ann1.XFIF97 Arachis hypogaea HOM05D005110 ORTHO05D006074 2.6e-39 166.0 178 55.1
Lj3g0016581 Lotus japonicus HOM05D005110 ORTHO05D006074 2.6e-39 166.0 179 50.8
MSTRG.18766 Avicennia marina HOM05D005110 ORTHO05D006074 5.7e-39 164.9 179 48.6
Hund18768 Selenicereus undatus HOM05D005110 ORTHO05D006074 7.5e-39 164.5 180 50.0
MSTRG.21034 Avicennia marina HOM05D005110 ORTHO05D006074 3.7e-38 162.2 178 50.6
QL01p011973 Quercus lobata HOM05D005110 ORTHO05D006074 3.7e-38 162.2 178 53.9
Peaxi162Scf00091g00622 Petunia axillaris HOM05D005110 ORTHO05D006074 8.2e-38 161.0 174 51.1
Migut.D02434 Erythranthe guttata HOM05D005110 ORTHO05D006074 1.2e-36 157.1 178 47.8
DCAR_012208 Daucus carota HOM05D005110 ORTHO05D006074 2.0e-36 156.4 173 49.1
Sc06g0008710 Simmondsia chinensis HOM05D005110 ORTHO05D006074 2.0e-36 156.4 184 48.4
arahy.Tifrunner.gnm1.ann1.NUG06Z Arachis hypogaea HOM05D005110 ORTHO05D006074 2.7e-36 156.0 180 48.9
ClCG02G022270 Citrullus lanatus HOM05D005110 ORTHO05D006074 3.5e-36 155.6 189 49.2
Nitab4.5_0005472g0010 Nicotiana tabacum HOM05D005110 ORTHO05D006074 1.0e-35 154.1 169 50.3
arahy.Tifrunner.gnm1.ann1.GADS7N Arachis hypogaea HOM05D005110 ORTHO05D006074 1.3e-35 153.7 179 48.6
Nitab4.5_0000937g0070 Nicotiana tabacum HOM05D005110 ORTHO05D006074 1.3e-35 153.7 171 49.1
Sed0010097 Sechium edule HOM05D005110 ORTHO05D006074 1.5e-34 150.2 178 46.6
CsaV3_6G038400 Cucumis sativus L. HOM05D005110 ORTHO05D006074 3.6e-33 145.6 161 50.9
ClCG01G012070 Citrullus lanatus HOM05D005110 ORTHO05D006074 4.7e-33 145.2 180 46.7
MELO3C014504.2 Cucumis melo HOM05D005110 ORTHO05D006074 6.1e-33 144.8 161 50.3
MELO3C004693.2 Cucumis melo HOM05D005110 ORTHO05D006074 1.8e-32 143.3 173 44.5
CsaV3_1G014930 Cucumis sativus L. HOM05D005110 ORTHO05D006074 5.2e-32 141.7 166 44.6
CsaV3_1G015850 Cucumis sativus L. HOM05D005110 ORTHO05D006074 5.2e-32 141.7 166 44.6
TAR623G0362 Trochodendron aralioides HOM05D005110 ORTHO05D006074 1.8e-29 133.3 130 54.6
MSTRG.17701 Avicennia marina HOM05D005110 ORTHO05D006074 4.1e-29 132.1 169 46.7
BraA07t29533Z Brassica rapa HOM05D005110 ORTHO05D006074 9.1e-29 131.0 166 43.4
CARHR119990 Cardamine hirsuta HOM05D005110 ORTHO05D006074 1.2e-28 130.6 170 44.7
A07p18150 Brassica napus HOM05D005110 ORTHO05D006074 1.6e-28 130.2 166 43.4
Thhalv10002110m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 1.6e-28 130.2 177 42.9
BcaB02g10088 Brassica carinata HOM05D005110 ORTHO05D006074 2.7e-28 129.4 178 43.8
C04p24220 Brassica napus HOM05D005110 ORTHO05D006074 3.5e-28 129.0 177 42.4
BolC4t23920H Brassica oleracea HOM05D005110 ORTHO05D006074 3.5e-28 129.0 177 42.4
Carub.0004s0802 Capsella rubella HOM05D005110 ORTHO05D006074 7.7e-28 127.9 170 43.5
THA.LOC104800521 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 7.7e-28 127.9 170 45.3
Hund20930 Selenicereus undatus HOM05D005110 ORTHO05D006074 1.7e-27 126.7 138 50.7
AT2G27385 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 2.9e-27 125.9 170 43.5
BcaC02g10869 Brassica carinata HOM05D005110 ORTHO05D006074 2.9e-27 125.9 177 41.8
Sp4g10180 Schrenkiella parvula HOM05D005110 ORTHO05D006074 5.0e-27 125.2 165 41.8
AL4G21340 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 8.6e-27 124.4 170 43.5
TAR369G1010 Trochodendron aralioides HOM05D005110 ORTHO05D006074 2.1e-25 119.8 127 53.5
Lj2P968T16 Lonicera japonica HOM05D005110 ORTHO05D006074 1.8e-24 116.7 120 48.3
Sp6g22820 Schrenkiella parvula HOM05D005110 ORTHO05D006074 2.3e-24 116.3 169 42.6
AT5G22430 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 3.0e-24 115.9 169 42.0
AL6G33450 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 4.0e-24 115.5 168 41.7
CARHR191100 Cardamine hirsuta HOM05D005110 ORTHO05D006074 4.0e-24 115.5 168 44.0
BcaB05g22726 Brassica carinata HOM05D005110 ORTHO05D006074 6.8e-24 114.8 169 43.2
C02p10870 Brassica napus HOM05D005110 ORTHO05D006074 2.0e-23 113.2 178 41.0
Thhalv10014830m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 2.0e-23 113.2 169 41.4
Carub.0006s2017 Capsella rubella HOM05D005110 ORTHO05D006074 4.4e-23 112.1 169 42.0
THA.LOC104810920 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 4.4e-23 112.1 167 39.5
BNapus_Darmor_BZH_scaffold_38p00660 Brassica napus HOM05D005110 ORTHO05D006074 5.7e-23 111.7 169 41.4
Aa31LG1G13130 Aethionema arabicum HOM05D005110 ORTHO05D006074 9.8e-23 110.9 170 41.8
BraA02t05659Z Brassica rapa HOM05D005110 ORTHO05D006074 9.8e-23 110.9 169 42.0
BcaB08g36432 Brassica carinata HOM05D000477 ORTHO05D006074 2.2e-22 109.8 168 40.5
Haze_23356 Corylus avellana HOM05D005110 ORTHO05D006074 2.2e-22 109.8 101 62.4
BolC2t07157H Brassica oleracea HOM05D005110 ORTHO05D006074 6.3e-22 108.2 169 41.4
HPP92_011908 Vanilla planifolia HOM05D005110 ORTHO05D006074 1.6e-20 103.6 116 49.1
Manes.04G002101 Manihot esculenta HOM05D005110 ORTHO05D006074 2.0e-20 103.2 115 45.2
unitig_746.g26607 Utricularia gibba HOM05D005110 ORTHO05D006074 1.3e-19 100.5 145 38.6
ATR0580G107 Amborella trichopoda HOM05D005110 ORTHO05D006074 1.7e-19 100.1 187 35.8
Actinidia35470 Actinidia chinensis HOM05D005110 ORTHO05D006074 2.9e-19 99.4 93 55.9
vmacro14354 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 1.9e-18 96.7 104 51.0
BcaC03g13883 Brassica carinata HOM05D005110 ORTHO05D006074 9.5e-18 94.4 154 39.6
HPP92_005471 Vanilla planifolia HOM05D005110 ORTHO05D006074 1.6e-17 93.6 195 33.8
TPR.G4458 Trifolium pratense HOM05D005110 ORTHO05D006074 1.4e-08 63.9 68 48.5
C09p54160 Brassica napus HOM05D005110 ORTHO05D006074 4.0e-08 62.4 168 29.8
BolC9t58287H Brassica oleracea HOM05D005110 ORTHO05D006074 5.2e-08 62.0 173 29.5
Zm00001eb242880 Zea mays HOM05D005110 ORTHO05D006074 1.3e-06 57.4 213 26.8


User provided reference genes

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